RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 FAAP24Q9BTP7 215 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 TAS2R10Q9NYW0 307 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 ABRACLQ9P1F3 81 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 KCNE5Q9UJ90 142 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 SSUH2Q9Y2M2 353 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 FBXO7Q9Y3I1 522 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 A0A1W2PN81 502 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 LNP1A1A4G5 178 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 TMEM235A6NFC5 223 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 UPK3BL1B0FP48 263 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 UPK3BL2E5RIL1 263 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 PRAMEF26H0Y7S4 382 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 FFAR2O15552 330 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 EPB42P16452 691 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 CHRNA7P36544 502 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 GDF5P43026 501 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 PTH2RP49190 550 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 TLE4Q04727 773 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 RAB35Q15286 201 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 HMGN3Q15651 99 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 MAPK14Q16539 360 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 CHRFAM7AQ494W8 412 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 PRRT3Q5FWE3 981 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 VWA2Q5GFL6 755 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 COX20Q5RI15 118 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 ZNF697Q5TEC3 545 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 WDR88Q6ZMY6 472 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 FAM83HQ6ZRV2 1179 aaPredicted RBP6.81□□□□□ -1.32
CDKL5-201ENST00000379989 SZRD1Q7Z422 152 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 FCAMRQ8WWV6 532 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 URM1Q9BTM9 101 aaKnown RBP6.81□□□□□ -1.32
CDKL5-201ENST00000379989 ACTR3CQ9C0K3 210 aaPredicted RBP6.81□□□□□ -1.32
CDKL5-201ENST00000379989 CHST6Q9GZX3 395 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 DNAJC4Q9NNZ3 241 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 IL26Q9NPH9 171 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 MMP24Q9Y5R2 645 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 CHD3Q12873 2000 aaKnown RBP6.81□□□□□ -1.32
CDKL5-201ENST00000379989 TMEM269A0A1B0GVZ9 245 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 TRBC2A0A5B9 178 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 H7C417 338 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 DVL1O14640 695 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 PPP1R3DO95685 299 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 NKX6-1P78426 367 aaPredicted RBP6.81□□□□□ -1.32
CDKL5-201ENST00000379989 DPTQ07507 201 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 AIMP2Q13155 320 aaKnown RBP6.81□□□□□ -1.32
CDKL5-201ENST00000379989 SRSF5Q13243 272 aaKnown RBP6.81□□□□□ -1.32
CDKL5-201ENST00000379989 AGERQ15109 404 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 UBE2V2Q15819 145 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 ZNF674Q2M3X9 581 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 TMEM240Q5SV17 173 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 SBSNQ6UWP8 590 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 CEACAM19Q7Z692 300 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 NFKBIDQ8NI38 313 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 RSC1A1Q92681 617 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 CXorf40BQ96DE9 158 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 SMAD5Q99717 465 aaKnown RBP6.81□□□□□ -1.32
CDKL5-201ENST00000379989 RAB33BQ9H082 229 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 SLC25A31Q9H0C2 315 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 SMG9Q9H0W8 520 aaKnown RBP6.81□□□□□ -1.32
CDKL5-201ENST00000379989 RGCCQ9H4X1 137 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 SLC32A1Q9H598 525 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 CHST11Q9NPF2 352 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 TRPC4Q9UBN4 977 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 TMED3Q9Y3Q3 217 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 SLCO1B1Q9Y6L6 691 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 EDDM13A0A1B0GTR0 161 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 FAM171A2A8MVW0 826 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 GAPDHSO14556 408 aaPredicted RBP6.81□□□□□ -1.32
CDKL5-201ENST00000379989 TAPBPO15533 448 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 OR1F1O43749 312 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 CLDN9O95484 217 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 IGHA1P01876 353 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 MBPP02686 304 aaPredicted RBP6.81□□□□□ -1.32
CDKL5-201ENST00000379989 CHRM4P08173 479 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 SELEP16581 610 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 BMI1P35226 326 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 LPAR6P43657 344 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 DGKGP49619 791 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 PDX1P52945 283 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 ATP1B3P54709 279 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 DVL1P1P54792 670 aaPredicted RBP6.81□□□□□ -1.32
CDKL5-201ENST00000379989 SLC37A1P57057 533 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 CDK5Q00535 292 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 SCARB2Q14108 478 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 TMEM95Q3KNT9 176 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 UBE2NLQ5JXB2 153 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 TNFAIP8L2Q6P589 184 aaPredicted RBP6.81□□□□□ -1.32
CDKL5-201ENST00000379989 FAM199XQ6PEV8 388 aaPredicted RBP6.81□□□□□ -1.32
CDKL5-201ENST00000379989 TMEM184AQ6ZMB5 413 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 IQCHQ86VS3 1027 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 EID2Q8N6I1 236 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 TERB2Q8NHR7 220 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 EXTL1Q92935 676 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 ARSGQ96EG1 525 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 LINC00615Q96LM1 132 aaPredicted RBP6.81□□□□□ -1.32
CDKL5-201ENST00000379989 OR14A2Q96R54 314 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 SERINC1Q9NRX5 453 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 HCSTQ9UBK5 93 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 FCF1Q9Y324 198 aaKnown RBP6.81□□□□□ -1.32
CDKL5-201ENST00000379989 ATG4BQ9Y4P1 393 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms