RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 FER1L6Q2WGJ9 1857 aa12.29□□□□□ -0.44
HIPK3-202ENST00000379016 ZNF814B7Z6K7 855 aa12.29□□□□□ -0.44
HIPK3-202ENST00000379016 GPR171O14626 319 aa12.29□□□□□ -0.44
HIPK3-202ENST00000379016 VWA2Q5GFL6 755 aa12.29□□□□□ -0.44
HIPK3-202ENST00000379016 COMMD6Q7Z4G1 85 aa12.29□□□□□ -0.44
HIPK3-202ENST00000379016 LGI3Q8N145 548 aa12.29□□□□□ -0.44
HIPK3-202ENST00000379016 OR6V1Q8N148 313 aa12.29□□□□□ -0.44
HIPK3-202ENST00000379016 TMEM178AQ8NBL3 297 aa12.29□□□□□ -0.44
HIPK3-202ENST00000379016 WDR83Q9BRX9 315 aaKnown RBP12.29□□□□□ -0.44
HIPK3-202ENST00000379016 INTS6Q9UL03 887 aaKnown RBP12.29□□□□□ -0.44
HIPK3-202ENST00000379016 MS4A18H0YCH9 400 aa12.29□□□□□ -0.44
HIPK3-202ENST00000379016 KCNAB3O43448 404 aa12.29□□□□□ -0.44
HIPK3-202ENST00000379016 PTGIRP43119 386 aa12.29□□□□□ -0.44
HIPK3-202ENST00000379016 CXCL12P48061 93 aa12.29□□□□□ -0.44
HIPK3-202ENST00000379016 CACNG7P62955 275 aa12.29□□□□□ -0.44
HIPK3-202ENST00000379016 ZNF154Q13106 437 aa12.29□□□□□ -0.44
HIPK3-202ENST00000379016 MFAP5Q13361 173 aa12.29□□□□□ -0.44
HIPK3-202ENST00000379016 RBMS2Q15434 407 aaKnown RBP12.29□□□□□ -0.44
HIPK3-202ENST00000379016 GPR19Q15760 415 aa12.29□□□□□ -0.44
HIPK3-202ENST00000379016 MS4A18Q3C1V0 323 aa12.29□□□□□ -0.44
HIPK3-202ENST00000379016 WBP2NLQ6ICG8 309 aa12.29□□□□□ -0.44
HIPK3-202ENST00000379016 BTLAQ7Z6A9 289 aa12.29□□□□□ -0.44
HIPK3-202ENST00000379016 NETO1Q8TDF5 533 aa12.29□□□□□ -0.44
HIPK3-202ENST00000379016 TMEM40Q8WWA1 233 aa12.29□□□□□ -0.44
HIPK3-202ENST00000379016 TOE1Q96GM8 510 aaKnown RBP12.29□□□□□ -0.44
HIPK3-202ENST00000379016 TCFL5Q9UL49 500 aa12.29□□□□□ -0.44
HIPK3-202ENST00000379016 EVPLQ92817 2033 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 A0A1W2PNV4 684 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 LRIT2A6NDA9 550 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 CA12O43570 354 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 H2AFB1P0C5Y9 115 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 JAM2P57087 298 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 ACOT6Q3I5F7 207 aaPredicted RBP12.28□□□□□ -0.44
HIPK3-202ENST00000379016 C14orf80Q86SX3 495 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 OR52N5Q8NH56 324 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 APIPQ96GX9 242 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 ZNF281Q9Y2X9 895 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 SLC22A7Q9Y694 548 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 TRIP11Q15643 1979 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 RFPL4AA6NLU0 287 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 ZNF727A8MUV8 499 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 RFPL4AL1F8VTS6 287 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 SIRPB1O00241 398 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 PPOXP50336 477 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 SRPXP78539 464 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 OR4D10Q8NGI6 311 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 GPX7Q96SL4 187 aaPredicted RBP12.28□□□□□ -0.44
HIPK3-202ENST00000379016 PRAMEF11O60813 436 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 SELEP16581 610 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 IAH1Q2TAA2 248 aaPredicted RBP12.28□□□□□ -0.44
HIPK3-202ENST00000379016 ZNF260Q3ZCT1 412 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 ANKRD16Q6P6B7 361 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 DTWD1Q8N5C7 304 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 CENPOQ9BU64 300 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 NTN4Q9HB63 628 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 SLC22A13Q9Y226 551 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 FAM166BA8MTA8 275 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 ZNF324O75467 553 aaPredicted RBP12.28□□□□□ -0.44
HIPK3-202ENST00000379016 MPC1LP0DKB6 136 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 PAX5Q02548 391 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 TXNRD3NBQ6F5E7 133 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 MDGA2Q7Z553 956 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 RLN3Q8WXF3 142 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 RPL3LQ92901 407 aaKnown RBP12.28□□□□□ -0.44
HIPK3-202ENST00000379016 FAHD2AQ96GK7 314 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 MKRN2Q9H000 416 aaKnown RBP12.28□□□□□ -0.44
HIPK3-202ENST00000379016 NOX4Q9NPH5 578 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 CBLCQ9ULV8 474 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 FAM24AA6NFZ4 105 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 ACOD1A6NK06 481 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 MGPP08493 103 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 SDC1P18827 310 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 GLRA1P23415 457 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 DCTP40126 519 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 PBX1P40424 430 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 OPRL1P41146 370 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 OR1Q1Q15612 314 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 ASB17Q8WXJ9 295 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 ZCCHC14Q8WYQ9 949 aaKnown RBP12.28□□□□□ -0.44
HIPK3-202ENST00000379016 PADI1Q9ULC6 663 aa12.28□□□□□ -0.44
HIPK3-202ENST00000379016 KLF11O14901 512 aa12.27□□□□□ -0.44
HIPK3-202ENST00000379016 OR8G3PP0DMU2 310 aa12.27□□□□□ -0.44
HIPK3-202ENST00000379016 CEACAM7Q14002 265 aa12.27□□□□□ -0.44
HIPK3-202ENST00000379016 FAM162BQ5T6X4 162 aa12.27□□□□□ -0.44
HIPK3-202ENST00000379016 PRSS3P2Q8NHM4 247 aa12.27□□□□□ -0.44
HIPK3-202ENST00000379016 ACTR3CQ9C0K3 210 aaPredicted RBP12.27□□□□□ -0.44
HIPK3-202ENST00000379016 C20orf85Q9H1P6 137 aa12.27□□□□□ -0.44
HIPK3-202ENST00000379016 BICRAQ9NZM4 1560 aa12.27□□□□□ -0.44
HIPK3-202ENST00000379016 UNC13AQ9UPW8 1703 aa12.27□□□□□ -0.44
HIPK3-202ENST00000379016 UBE2L6O14933 153 aa12.27□□□□□ -0.44
HIPK3-202ENST00000379016 PTTG1O95997 202 aa12.27□□□□□ -0.44
HIPK3-202ENST00000379016 AKR1C3P42330 323 aa12.27□□□□□ -0.44
HIPK3-202ENST00000379016 NTHL1P78549 312 aa12.27□□□□□ -0.44
HIPK3-202ENST00000379016 ENDOGQ14249 297 aaKnown RBP12.27□□□□□ -0.44
HIPK3-202ENST00000379016 CCDC190Q86UF4 302 aa12.27□□□□□ -0.44
HIPK3-202ENST00000379016 CDRT4Q8N9R6 151 aa12.27□□□□□ -0.44
HIPK3-202ENST00000379016 RNF2Q99496 336 aa12.27□□□□□ -0.44
HIPK3-202ENST00000379016 PLA2G12AQ9BZM1 189 aa12.27□□□□□ -0.44
HIPK3-202ENST00000379016 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.27□□□□□ -0.45
HIPK3-202ENST00000379016 ALOX12BO75342 701 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms