RNA–Protein interactions for RNA: ENST00000378543.2

FAAP20-201, Transcript of FA core complex associated protein 20, humanhuman

TSL 2

Gene FAAP20, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-201ENST00000378543 NSL1Q96IY1 281 aa20.34■□□□□ 0.85
FAAP20-201ENST00000378543 C7orf34Q96L11 122 aa20.34■□□□□ 0.85
FAAP20-201ENST00000378543 TNFRSF13CQ96RJ3 184 aa20.34■□□□□ 0.85
FAAP20-201ENST00000378543 TXNIPQ9H3M7 391 aa20.34■□□□□ 0.85
FAAP20-201ENST00000378543 SMURF2Q9HAU4 748 aa20.34■□□□□ 0.85
FAAP20-201ENST00000378543 KRCC1Q9NPI7 259 aaPredicted RBP20.34■□□□□ 0.85
FAAP20-201ENST00000378543 NDUFAF4Q9P032 175 aa20.34■□□□□ 0.85
FAAP20-201ENST00000378543 RHCGQ9UBD6 479 aa20.34■□□□□ 0.85
FAAP20-201ENST00000378543 FBXO9Q9UK97 447 aaPredicted RBP20.34■□□□□ 0.85
FAAP20-201ENST00000378543 A0A087WUU8 490 aa20.33■□□□□ 0.85
FAAP20-201ENST00000378543 DHHO43323 396 aa20.33■□□□□ 0.85
FAAP20-201ENST00000378543 UBL3O95164 117 aa20.33■□□□□ 0.85
FAAP20-201ENST00000378543 FARS2O95363 451 aaKnown RBP20.33■□□□□ 0.85
FAAP20-201ENST00000378543 F13BP05160 661 aa20.33■□□□□ 0.85
FAAP20-201ENST00000378543 H1F0P07305 194 aaKnown RBP20.33■□□□□ 0.85
FAAP20-201ENST00000378543 CSF3P09919 207 aa20.33■□□□□ 0.85
FAAP20-201ENST00000378543 ACADSP16219 412 aa20.33■□□□□ 0.85
FAAP20-201ENST00000378543 CALB2P22676 271 aa20.33■□□□□ 0.85
FAAP20-201ENST00000378543 ZNF133P52736 654 aaPredicted RBP20.33■□□□□ 0.85
FAAP20-201ENST00000378543 TMEM249Q2WGJ8 235 aa20.33■□□□□ 0.85
FAAP20-201ENST00000378543 LRFN4Q6PJG9 635 aa20.33■□□□□ 0.85
FAAP20-201ENST00000378543 OAFQ86UD1 273 aa20.33■□□□□ 0.85
FAAP20-201ENST00000378543 NOXO1Q8NFA2 376 aa20.33■□□□□ 0.85
FAAP20-201ENST00000378543 PYURFQ96I23 114 aa20.33■□□□□ 0.85
FAAP20-201ENST00000378543 NSMCE2Q96MF7 247 aa20.33■□□□□ 0.85
FAAP20-201ENST00000378543 FKBP7Q9Y680 259 aa20.33■□□□□ 0.85
FAAP20-201ENST00000378543 VSTM5A8MXK1 200 aa20.32■□□□□ 0.84
FAAP20-201ENST00000378543 EFCAB9A8MZ26 197 aa20.32■□□□□ 0.84
FAAP20-201ENST00000378543 hCG_2039718K7EN88 272 aa20.32■□□□□ 0.84
FAAP20-201ENST00000378543 IGHMP01871 453 aa20.32■□□□□ 0.84
FAAP20-201ENST00000378543 OR8G3PP0DMU2 310 aa20.32■□□□□ 0.84
FAAP20-201ENST00000378543 ZNF14P17017 642 aaPredicted RBP20.32■□□□□ 0.84
FAAP20-201ENST00000378543 TCN1P20061 433 aaPredicted RBP20.32■□□□□ 0.84
FAAP20-201ENST00000378543 NPR2P20594 1047 aa20.32■□□□□ 0.84
FAAP20-201ENST00000378543 ZNF84P51523 738 aa20.32■□□□□ 0.84
FAAP20-201ENST00000378543 ARMC4Q5T2S8 1044 aa20.32■□□□□ 0.84
FAAP20-201ENST00000378543 KRT80Q6KB66 452 aa20.32■□□□□ 0.84
FAAP20-201ENST00000378543 MCUR1Q96AQ8 359 aa20.32■□□□□ 0.84
FAAP20-201ENST00000378543 DHRS1Q96LJ7 313 aa20.32■□□□□ 0.84
FAAP20-201ENST00000378543 TMEM129A0AVI4 362 aa20.31■□□□□ 0.84
FAAP20-201ENST00000378543 ARPC2O15144 300 aa20.31■□□□□ 0.84
FAAP20-201ENST00000378543 PIP5K1CO60331 668 aa20.31■□□□□ 0.84
FAAP20-201ENST00000378543 QDPRP09417 244 aa20.31■□□□□ 0.84
FAAP20-201ENST00000378543 MAKP20794 623 aa20.31■□□□□ 0.84
FAAP20-201ENST00000378543 PTDSS1P48651 473 aaKnown RBP20.31■□□□□ 0.84
FAAP20-201ENST00000378543 PDLIM4P50479 330 aa20.31■□□□□ 0.84
FAAP20-201ENST00000378543 RAB1AP62820 205 aa20.31■□□□□ 0.84
FAAP20-201ENST00000378543 SNTB2Q13425 540 aaKnown RBP20.31■□□□□ 0.84
FAAP20-201ENST00000378543 DAG1Q14118 895 aa20.31■□□□□ 0.84
FAAP20-201ENST00000378543 LAPTM4AQ15012 233 aa20.31■□□□□ 0.84
FAAP20-201ENST00000378543 MTX3Q5HYI7 312 aa20.31■□□□□ 0.84
FAAP20-201ENST00000378543 C10orf128Q5T292 105 aa20.31■□□□□ 0.84
FAAP20-201ENST00000378543 TSEN54Q7Z6J9 526 aaKnown RBP20.31■□□□□ 0.84
FAAP20-201ENST00000378543 SKA3Q8IX90 412 aa20.31■□□□□ 0.84
FAAP20-201ENST00000378543 MOSPD2Q8NHP6 518 aa20.31■□□□□ 0.84
FAAP20-201ENST00000378543 FGFBP3Q8TAT2 258 aa20.31■□□□□ 0.84
FAAP20-201ENST00000378543 SLC7A13Q8TCU3 470 aa20.31■□□□□ 0.84
FAAP20-201ENST00000378543 DOK1Q99704 481 aa20.31■□□□□ 0.84
FAAP20-201ENST00000378543 ALG12Q9BV10 488 aa20.31■□□□□ 0.84
FAAP20-201ENST00000378543 MUC13Q9H3R2 512 aa20.31■□□□□ 0.84
FAAP20-201ENST00000378543 TMEM38BQ9NVV0 291 aa20.31■□□□□ 0.84
FAAP20-201ENST00000378543 A6NIZ1 184 aa20.3■□□□□ 0.84
FAAP20-201ENST00000378543 B2RBV5 119 aa20.3■□□□□ 0.84
FAAP20-201ENST00000378543 TRMUO75648 421 aaKnown RBP20.3■□□□□ 0.84
FAAP20-201ENST00000378543 RAB36O95755 333 aa20.3■□□□□ 0.84
FAAP20-201ENST00000378543 PATE4P0C8F1 98 aa20.3■□□□□ 0.84
FAAP20-201ENST00000378543 GIPRP48546 466 aa20.3■□□□□ 0.84
FAAP20-201ENST00000378543 PPOXP50336 477 aa20.3■□□□□ 0.84
FAAP20-201ENST00000378543 RAP1BP61224 184 aa20.3■□□□□ 0.84
FAAP20-201ENST00000378543 RPL27P61353 136 aaKnown RBP20.3■□□□□ 0.84
FAAP20-201ENST00000378543 RAP1AP62834 184 aa20.3■□□□□ 0.84
FAAP20-201ENST00000378543 SVOPLQ8N434 492 aa20.3■□□□□ 0.84
FAAP20-201ENST00000378543 SLC22A24Q8N4F4 322 aa20.3■□□□□ 0.84
FAAP20-201ENST00000378543 RBM15BQ8NDT2 890 aaKnown RBP20.3■□□□□ 0.84
FAAP20-201ENST00000378543 MCHR2Q969V1 340 aa20.3■□□□□ 0.84
FAAP20-201ENST00000378543 VWC2LB2RUY7 222 aa20.29■□□□□ 0.84
FAAP20-201ENST00000378543 SEMG1P04279 462 aa20.29■□□□□ 0.84
FAAP20-201ENST00000378543 ZNF35P13682 527 aa20.29■□□□□ 0.84
FAAP20-201ENST00000378543 NR4A1P22736 598 aa20.29■□□□□ 0.84
FAAP20-201ENST00000378543 VLDLRP98155 873 aa20.29■□□□□ 0.84
FAAP20-201ENST00000378543 RUNX1T1Q06455 604 aa20.29■□□□□ 0.84
FAAP20-201ENST00000378543 MSMPQ1L6U9 139 aa20.29■□□□□ 0.84
FAAP20-201ENST00000378543 C6orf52Q5T4I8 152 aa20.29■□□□□ 0.84
FAAP20-201ENST00000378543 PODNL1Q6PEZ8 512 aa20.29■□□□□ 0.84
FAAP20-201ENST00000378543 ZCCHC24Q8N2G6 241 aaKnown RBP20.29■□□□□ 0.84
FAAP20-201ENST00000378543 LRRC75AQ8NAA5 344 aa20.29■□□□□ 0.84
FAAP20-201ENST00000378543 ZNF347Q96SE7 839 aa20.29■□□□□ 0.84
FAAP20-201ENST00000378543 KCNK17Q96T54 332 aa20.29■□□□□ 0.84
FAAP20-201ENST00000378543 C1orf21Q9H246 121 aa20.29■□□□□ 0.84
FAAP20-201ENST00000378543 ACTR3BQ9P1U1 418 aa20.29■□□□□ 0.84
FAAP20-201ENST00000378543 SPEF1Q9Y4P9 236 aa20.29■□□□□ 0.84
FAAP20-201ENST00000378543 SH3PXD2BA1X283 911 aa20.28■□□□□ 0.84
FAAP20-201ENST00000378543 A8MV72 311 aaPredicted RBP20.28■□□□□ 0.84
FAAP20-201ENST00000378543 AHCYL1O43865 530 aa20.28■□□□□ 0.84
FAAP20-201ENST00000378543 IGFBP1P08833 259 aaPredicted RBP20.28■□□□□ 0.84
FAAP20-201ENST00000378543 USF1P22415 310 aaPredicted RBP20.28■□□□□ 0.84
FAAP20-201ENST00000378543 CTXN1P60606 82 aa20.28■□□□□ 0.84
FAAP20-201ENST00000378543 LSM11P83369 360 aaKnown RBP eCLIP20.28■□□□□ 0.84
FAAP20-201ENST00000378543 RAB39AQ14964 217 aa20.28■□□□□ 0.84
FAAP20-201ENST00000378543 CARTPTQ16568 116 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms