RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 FCER1GP30273 86 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 SYT14P1Q58G82 188 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 ETV3LQ6ZN32 361 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 C17orf107Q6ZR85 190 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 PXT1Q8NFP0 134 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 KCNG3Q8TAE7 436 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 SLAMF9Q96A28 289 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 MYEOVQ96EZ4 313 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 SEC22AQ96IW7 307 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 FOXN4Q96NZ1 517 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 SLC6A17Q9H1V8 727 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 C1orf198Q9H425 327 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 ACER3Q9NUN7 267 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 MUTYHQ9UIF7 546 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 PMS2P2O95744 297 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 TK1P04183 234 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 ADRB1P08588 477 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 NME1P15531 152 aaKnown RBP13.36□□□□□ -0.27
PRDM16-203ENST00000378391 SERPINA2P20848 420 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 CST5P28325 142 aaPredicted RBP13.36□□□□□ -0.27
PRDM16-203ENST00000378391 ACSM1Q08AH1 577 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 OR10K2Q6IF99 312 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 HIST2H3AQ71DI3 136 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 NMNAT3Q96T66 252 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 ELF4Q99607 663 aaPredicted RBP13.36□□□□□ -0.27
PRDM16-203ENST00000378391 CMSS1Q9BQ75 279 aaKnown RBP13.36□□□□□ -0.27
PRDM16-203ENST00000378391 TMEM59Q9BXS4 323 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 SIRT5Q9NXA8 310 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 FTSJ1Q9UET6 329 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 EXO1Q9UQ84 846 aaKnown RBP13.36□□□□□ -0.27
PRDM16-203ENST00000378391 BAK1Q16611 211 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 CST9LP1Q5W188 147 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 SLC48A1Q6P1K1 146 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 ANGPTL6Q8NI99 470 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 PKMYT1Q99640 499 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 C20orf85Q9H1P6 137 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 ZNF286AQ9HBT8 521 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 C1orf123Q9NWV4 160 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 NDRG3Q9UGV2 375 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 V9GYS6 101 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 DEDDO75618 318 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 FOXK1P85037 733 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 ALKBH1Q13686 389 aaKnown RBP13.36□□□□□ -0.27
PRDM16-203ENST00000378391 ADIRFQ15847 76 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 LIX1LQ8IVB5 337 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 FRMD1Q8N878 549 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 ZNF321PQ8N8H1 164 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 LILRB1Q8NHL6 650 aaPredicted RBP13.36□□□□□ -0.27
PRDM16-203ENST00000378391 LINC01599Q8WXQ3 324 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 PDXPQ96GD0 296 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 RBM14Q96PK6 669 aaKnown RBP13.36□□□□□ -0.27
PRDM16-203ENST00000378391 CITED1Q99966 193 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 PRSS16Q9NQE7 514 aa13.36□□□□□ -0.27
PRDM16-203ENST00000378391 THSD7AQ9UPZ6 1657 aa13.35□□□□□ -0.27
PRDM16-203ENST00000378391 TCF21O43680 179 aa13.35□□□□□ -0.27
PRDM16-203ENST00000378391 CALCRP30988 508 aa13.35□□□□□ -0.27
PRDM16-203ENST00000378391 CCR6P51684 374 aa13.35□□□□□ -0.27
PRDM16-203ENST00000378391 SLC35D3Q5M8T2 416 aa13.35□□□□□ -0.27
PRDM16-203ENST00000378391 MRPL43Q8N983 215 aaKnown RBP13.35□□□□□ -0.27
PRDM16-203ENST00000378391 SLC30A7Q8NEW0 376 aa13.35□□□□□ -0.27
PRDM16-203ENST00000378391 OR5M8Q8NGP6 311 aa13.35□□□□□ -0.27
PRDM16-203ENST00000378391 TMEM255BQ8WV15 326 aa13.35□□□□□ -0.27
PRDM16-203ENST00000378391 TPSD1Q9BZJ3 242 aa13.35□□□□□ -0.27
PRDM16-203ENST00000378391 ANKRD30BLA7E2S9 258 aa13.35□□□□□ -0.27
PRDM16-203ENST00000378391 TIMP1P01033 207 aa13.35□□□□□ -0.27
PRDM16-203ENST00000378391 THBS1P07996 1170 aa13.35□□□□□ -0.27
PRDM16-203ENST00000378391 ZNF28P17035 718 aa13.35□□□□□ -0.27
PRDM16-203ENST00000378391 PTOV1Q86YD1 416 aa13.35□□□□□ -0.27
PRDM16-203ENST00000378391 CDCA3Q99618 268 aaPredicted RBP13.35□□□□□ -0.27
PRDM16-203ENST00000378391 A0A0B4J2A0 478 aa13.35□□□□□ -0.27
PRDM16-203ENST00000378391 CD14P08571 375 aa13.35□□□□□ -0.27
PRDM16-203ENST00000378391 DBHP09172 617 aa13.35□□□□□ -0.27
PRDM16-203ENST00000378391 PRICKLE2Q7Z3G6 844 aa13.35□□□□□ -0.27
PRDM16-203ENST00000378391 CCDC190Q86UF4 302 aa13.35□□□□□ -0.27
PRDM16-203ENST00000378391 OR13C9Q8NGT0 318 aa13.35□□□□□ -0.27
PRDM16-203ENST00000378391 SCARB1Q8WTV0 552 aa13.35□□□□□ -0.27
PRDM16-203ENST00000378391 FAM3CQ92520 227 aa13.35□□□□□ -0.27
PRDM16-203ENST00000378391 MCOLN1Q9GZU1 580 aa13.35□□□□□ -0.27
PRDM16-203ENST00000378391 METTL9Q9H1A3 318 aa13.35□□□□□ -0.27
PRDM16-203ENST00000378391 SHPKQ9UHJ6 478 aa13.35□□□□□ -0.27
PRDM16-203ENST00000378391 COL11A1P12107 1806 aaPredicted RBP13.35□□□□□ -0.27
PRDM16-203ENST00000378391 MMP7P09237 267 aaPredicted RBP13.35□□□□□ -0.27
PRDM16-203ENST00000378391 IRF2P14316 349 aa13.35□□□□□ -0.27
PRDM16-203ENST00000378391 TACR3P29371 465 aa13.35□□□□□ -0.27
PRDM16-203ENST00000378391 PCBD1P61457 104 aa13.35□□□□□ -0.27
PRDM16-203ENST00000378391 SLC35D2Q76EJ3 337 aa13.35□□□□□ -0.27
PRDM16-203ENST00000378391 BLNKQ8WV28 456 aa13.35□□□□□ -0.27
PRDM16-203ENST00000378391 NCDNQ9UBB6 729 aa13.35□□□□□ -0.27
PRDM16-203ENST00000378391 STEAP1Q9UHE8 339 aa13.35□□□□□ -0.27
PRDM16-203ENST00000378391 TTRP02766 147 aa13.34□□□□□ -0.27
PRDM16-203ENST00000378391 TAS2R30P59541 319 aa13.34□□□□□ -0.27
PRDM16-203ENST00000378391 MFGE8Q08431 387 aaPredicted RBP13.34□□□□□ -0.27
PRDM16-203ENST00000378391 MFSD12Q6NUT3 480 aa13.34□□□□□ -0.27
PRDM16-203ENST00000378391 CLRN3Q8NCR9 226 aa13.34□□□□□ -0.27
PRDM16-203ENST00000378391 LIN7BQ9HAP6 207 aa13.34□□□□□ -0.27
PRDM16-203ENST00000378391 SCN4AP35499 1836 aa13.34□□□□□ -0.27
PRDM16-203ENST00000378391 SRMP19623 302 aa13.34□□□□□ -0.27
PRDM16-203ENST00000378391 APLNRP35414 380 aa13.34□□□□□ -0.27
PRDM16-203ENST00000378391 PRR27Q6MZM9 219 aa13.34□□□□□ -0.27
PRDM16-203ENST00000378391 ABHD17CQ6PCB6 329 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms