RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 NTRK2Q16620 822 aa18.19■□□□□ 0.5
VSX1-202ENST00000376709 IZUMO1Q8IYV9 350 aa18.19■□□□□ 0.5
VSX1-202ENST00000376709 PRSS35Q8N3Z0 413 aa18.19■□□□□ 0.5
VSX1-202ENST00000376709 GPR148Q8TDV2 347 aa18.19■□□□□ 0.5
VSX1-202ENST00000376709 TMEM106AQ96A25 262 aa18.19■□□□□ 0.5
VSX1-202ENST00000376709 DCBLD2Q96PD2 775 aa18.19■□□□□ 0.5
VSX1-202ENST00000376709 OR8B4Q96RC9 309 aa18.19■□□□□ 0.5
VSX1-202ENST00000376709 METTL7AQ9H8H3 244 aa18.19■□□□□ 0.5
VSX1-202ENST00000376709 MRPL22Q9NWU5 206 aaKnown RBP18.19■□□□□ 0.5
VSX1-202ENST00000376709 GDF9O60383 454 aa18.18■□□□□ 0.5
VSX1-202ENST00000376709 CRABP1P29762 137 aa18.18■□□□□ 0.5
VSX1-202ENST00000376709 HOXD12P35452 270 aa18.18■□□□□ 0.5
VSX1-202ENST00000376709 BCL2A1Q16548 175 aa18.18■□□□□ 0.5
VSX1-202ENST00000376709 SLC36A2Q495M3 483 aa18.18■□□□□ 0.5
VSX1-202ENST00000376709 TMEM205Q6UW68 189 aa18.18■□□□□ 0.5
VSX1-202ENST00000376709 OR6S1Q8NH40 331 aa18.18■□□□□ 0.5
VSX1-202ENST00000376709 MFSD8Q8NHS3 518 aa18.18■□□□□ 0.5
VSX1-202ENST00000376709 ATOH1Q92858 354 aaPredicted RBP18.18■□□□□ 0.5
VSX1-202ENST00000376709 SLC26A1Q9H2B4 701 aa18.18■□□□□ 0.5
VSX1-202ENST00000376709 SMOC1Q9H4F8 434 aa18.18■□□□□ 0.5
VSX1-202ENST00000376709 AKIRIN1Q9H9L7 192 aaPredicted RBP18.18■□□□□ 0.5
VSX1-202ENST00000376709 TMEM165Q9HC07 324 aa18.18■□□□□ 0.5
VSX1-202ENST00000376709 GTF2A1LQ9UNN4 478 aa18.18■□□□□ 0.5
VSX1-202ENST00000376709 RALGAPA1Q6GYQ0 2036 aa18.18■□□□□ 0.5
VSX1-202ENST00000376709 NPIPA5E9PKD4 350 aa18.18■□□□□ 0.5
VSX1-202ENST00000376709 H3BML4 177 aa18.18■□□□□ 0.5
VSX1-202ENST00000376709 TMEM127O75204 238 aa18.18■□□□□ 0.5
VSX1-202ENST00000376709 H1FNTQ75WM6 255 aaPredicted RBP18.18■□□□□ 0.5
VSX1-202ENST00000376709 FCRLAQ7L513 359 aa18.18■□□□□ 0.5
VSX1-202ENST00000376709 ZNF679Q8IYX0 411 aa18.18■□□□□ 0.5
VSX1-202ENST00000376709 TMEM105Q8N8V8 129 aa18.18■□□□□ 0.5
VSX1-202ENST00000376709 OR10G3Q8NGC4 313 aa18.18■□□□□ 0.5
VSX1-202ENST00000376709 OR51A4Q8NGJ6 313 aa18.18■□□□□ 0.5
VSX1-202ENST00000376709 C4orf45Q96LM5 186 aa18.18■□□□□ 0.5
VSX1-202ENST00000376709 ULBP3Q9BZM4 244 aa18.18■□□□□ 0.5
VSX1-202ENST00000376709 NPIPA1Q9UND3 350 aa18.18■□□□□ 0.5
VSX1-202ENST00000376709 BDP1A6H8Y1 2624 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 FREM3P0C091 2139 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 ANXA2P2A6NMY6 339 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 SHISA8B8ZZ34 492 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 MS4A18H0YCH9 400 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 CER1O95813 267 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 ANXA2P07355 339 aaKnown RBP18.17■□□□□ 0.5
VSX1-202ENST00000376709 ADRB1P08588 477 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 ARSBP15848 533 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 TLE3Q04726 772 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 SLC17A1Q14916 467 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 MS4A18Q3C1V0 323 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 PLA1AQ53H76 456 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 WDR38Q5JTN6 314 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 FAM199XQ6PEV8 388 aaPredicted RBP18.17■□□□□ 0.5
VSX1-202ENST00000376709 KCTD18Q6PI47 426 aaPredicted RBP18.17■□□□□ 0.5
VSX1-202ENST00000376709 SLC7A5P1Q8MH63 180 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 OR10AC1Q8NH08 325 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 SLC22A8Q8TCC7 542 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 ITGB1BP2Q9UKP3 347 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 A6NIZ1 184 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 ZNF208O43345 1280 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 RAF1P04049 648 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 FGF5P12034 268 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 IFNGR1P15260 489 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 DPP4P27487 766 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 DAP3P51398 398 aaKnown RBP18.17■□□□□ 0.5
VSX1-202ENST00000376709 RAP1BP61224 184 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 RAP1AP62834 184 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 IL11RAQ14626 422 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 MRPL14Q6P1L8 145 aaKnown RBP18.17■□□□□ 0.5
VSX1-202ENST00000376709 LINGO2Q7L985 606 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 PRSS45Q7RTY3 260 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 KRT77Q7Z794 578 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 TSEN15Q8WW01 171 aaKnown RBP18.17■□□□□ 0.5
VSX1-202ENST00000376709 C5orf34Q96MH7 638 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 MRI1Q9BV20 369 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 DEFB126Q9BYW3 111 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 SDHAF3Q9NRP4 125 aa18.17■□□□□ 0.5
VSX1-202ENST00000376709 COA3Q9Y2R0 106 aaPredicted RBP18.17■□□□□ 0.5
VSX1-202ENST00000376709 CENPBD1B2RD01 187 aa18.16■□□□□ 0.5
VSX1-202ENST00000376709 MAS1P04201 325 aa18.16■□□□□ 0.5
VSX1-202ENST00000376709 ADRA2CP18825 462 aa18.16■□□□□ 0.5
VSX1-202ENST00000376709 BTCP35070 178 aa18.16■□□□□ 0.5
VSX1-202ENST00000376709 KIR3DL2P43630 455 aa18.16■□□□□ 0.5
VSX1-202ENST00000376709 POU3F1Q03052 451 aaPredicted RBP18.16■□□□□ 0.5
VSX1-202ENST00000376709 EIF2B1Q14232 305 aaKnown RBP18.16■□□□□ 0.5
VSX1-202ENST00000376709 MTFR2Q6P444 385 aa18.16■□□□□ 0.5
VSX1-202ENST00000376709 BPHLQ86WA6 291 aaPredicted RBP18.16■□□□□ 0.5
VSX1-202ENST00000376709 TMPRSS12Q86WS5 348 aa18.16■□□□□ 0.5
VSX1-202ENST00000376709 SIAH3Q8IW03 269 aa18.16■□□□□ 0.5
VSX1-202ENST00000376709 DNAAF1Q8NEP3 725 aa18.16■□□□□ 0.5
VSX1-202ENST00000376709 SLC25A38Q96DW6 304 aa18.16■□□□□ 0.5
VSX1-202ENST00000376709 RNF170Q96K19 258 aa18.16■□□□□ 0.5
VSX1-202ENST00000376709 RABL2AQ9UBK7 228 aaPredicted RBP18.16■□□□□ 0.5
VSX1-202ENST00000376709 GPN3Q9UHW5 284 aaPredicted RBP18.16■□□□□ 0.5
VSX1-202ENST00000376709 RABL2BQ9UNT1 228 aa18.16■□□□□ 0.5
VSX1-202ENST00000376709 BOLA1Q9Y3E2 137 aa18.16■□□□□ 0.5
VSX1-202ENST00000376709 WIF1Q9Y5W5 379 aa18.16■□□□□ 0.5
VSX1-202ENST00000376709 D6RAR5 112 aa18.15■□□□□ 0.5
VSX1-202ENST00000376709 MSX1P28360 303 aa18.15■□□□□ 0.5
VSX1-202ENST00000376709 ZP4Q12836 540 aa18.15■□□□□ 0.5
VSX1-202ENST00000376709 RNF138Q8WVD3 245 aa18.15■□□□□ 0.5
VSX1-202ENST00000376709 SMIM4Q8WVI0 70 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms