RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 TNFRSF13CQ96RJ3 184 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 CNN2Q99439 309 aaKnown RBP11.73□□□□□ -0.53
MSH5-204ENST00000375755 MNTQ99583 582 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 TLNRD1Q9H1K6 362 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 EXO5Q9H790 373 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 CES1P1Q9UKY3 287 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 WDR45Q9Y484 360 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 SPTY2D1-AS1A0A0U1RR47 76 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 B4DGG1 531 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 GPRIN2O60269 458 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 CD1AP06126 327 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 ZNF806P0C7X5 589 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 AGTR1P30556 359 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 PTGFRP43088 359 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 BLOC1S1P78537 153 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 ATXN7L3Q14CW9 347 aaPredicted RBP11.73□□□□□ -0.53
MSH5-204ENST00000375755 DEFB110Q30KQ9 67 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 RPL13AP3Q6NVV1 102 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 H3F3CQ6NXT2 135 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 STAC2Q6ZMT1 411 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 RANBP3LQ86VV4 465 aaPredicted RBP11.73□□□□□ -0.53
MSH5-204ENST00000375755 OR2L13Q8N349 312 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 TSTD1Q8NFU3 115 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 OR52E2Q8NGJ4 325 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 GPBAR1Q8TDU6 330 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 RSC1A1Q92681 617 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 OR2A5Q96R48 311 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 POFUT1Q9H488 388 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 MTHFD2LQ9H903 347 aaPredicted RBP11.73□□□□□ -0.53
MSH5-204ENST00000375755 ZNF629Q9UEG4 869 aaPredicted RBP11.73□□□□□ -0.53
MSH5-204ENST00000375755 TNFSF18Q9UNG2 199 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 HS3ST3A1Q9Y663 406 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 RNF222A6NCQ9 220 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 OR5H14A6NHG9 310 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 TNFRSF10CO14798 259 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 ZFPL1O95159 310 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 ACTL6AO96019 429 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 GTF2F2P13984 249 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 YPEL5P62699 121 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 LRRC37A5PQ49AS3 106 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 GLT8D1Q68CQ7 371 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 TMEM71Q6P5X7 295 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 OR4K13Q8NH42 304 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 PITHD1Q9GZP4 211 aaPredicted RBP11.73□□□□□ -0.53
MSH5-204ENST00000375755 ZFP57Q9NU63 452 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 HRASLS2Q9NWW9 162 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 GPN3Q9UHW5 284 aaPredicted RBP11.73□□□□□ -0.53
MSH5-204ENST00000375755 ZNF281Q9Y2X9 895 aa11.73□□□□□ -0.53
MSH5-204ENST00000375755 IGHV1OR15-9A0A0B4J2B8 117 aa11.72□□□□□ -0.53
MSH5-204ENST00000375755 RABIFP47224 123 aa11.72□□□□□ -0.53
MSH5-204ENST00000375755 SNRPEP62304 92 aaKnown RBP11.72□□□□□ -0.53
MSH5-204ENST00000375755 FIGLAQ6QHK4 219 aa11.72□□□□□ -0.53
MSH5-204ENST00000375755 SYT13Q7L8C5 426 aa11.72□□□□□ -0.53
MSH5-204ENST00000375755 CDK20Q8IZL9 346 aa11.72□□□□□ -0.53
MSH5-204ENST00000375755 STEAP2Q8NFT2 490 aa11.72□□□□□ -0.53
MSH5-204ENST00000375755 OR5T3Q8NGG3 340 aa11.72□□□□□ -0.53
MSH5-204ENST00000375755 OR8S1Q8NH09 359 aa11.72□□□□□ -0.53
MSH5-204ENST00000375755 OR6S1Q8NH40 331 aa11.72□□□□□ -0.53
MSH5-204ENST00000375755 SPAG17Q6Q759 2223 aa11.72□□□□□ -0.53
MSH5-204ENST00000375755 CD8AP01732 235 aa11.72□□□□□ -0.53
MSH5-204ENST00000375755 CD3DP04234 171 aa11.72□□□□□ -0.53
MSH5-204ENST00000375755 CSF1P09603 554 aa11.72□□□□□ -0.53
MSH5-204ENST00000375755 NR0B1P51843 470 aaKnown RBP11.72□□□□□ -0.53
MSH5-204ENST00000375755 LTBQ06643 244 aa11.72□□□□□ -0.53
MSH5-204ENST00000375755 RUNX2Q13950 521 aa11.72□□□□□ -0.53
MSH5-204ENST00000375755 TMEM35AQ53FP2 167 aa11.72□□□□□ -0.53
MSH5-204ENST00000375755 C10orf91Q5T1B1 145 aa11.72□□□□□ -0.53
MSH5-204ENST00000375755 RAB12Q6IQ22 244 aa11.72□□□□□ -0.53
MSH5-204ENST00000375755 SLC48A1Q6P1K1 146 aa11.72□□□□□ -0.53
MSH5-204ENST00000375755 C15orf40Q8WUR7 153 aa11.72□□□□□ -0.53
MSH5-204ENST00000375755 ASB13Q8WXK3 278 aa11.72□□□□□ -0.53
MSH5-204ENST00000375755 COL26A1Q96A83 441 aa11.72□□□□□ -0.53
MSH5-204ENST00000375755 PHYHIPLQ96FC7 376 aa11.72□□□□□ -0.53
MSH5-204ENST00000375755 CARHSP1Q9Y2V2 147 aaKnown RBP11.72□□□□□ -0.53
MSH5-204ENST00000375755 NPIPA5A0A0B4J1W7 369 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 OR14I1A6ND48 311 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 PRR32B1ATL7 298 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 NPIPA7E9PJI5 369 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 IMPA2O14732 288 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 XRCC3O43542 346 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 OR2F2O95006 317 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 OR4E1P0C645 316 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 NPIPA8P0DM63 369 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 NFYBP25208 207 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 SOX2P48431 317 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 PDZK1IP1Q13113 114 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 OR2F1Q13607 317 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 AMZ1Q400G9 498 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 ZNF704Q6ZNC4 412 aaPredicted RBP11.71□□□□□ -0.53
MSH5-204ENST00000375755 RNF166Q96A37 237 aaPredicted RBP11.71□□□□□ -0.53
MSH5-204ENST00000375755 ZNF681Q96N22 645 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 ZNF559Q9BR84 538 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 PDCD10Q9BUL8 212 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 LRRC61Q9BV99 259 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 C1orf198Q9H425 327 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 FAM60AQ9NP50 221 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 PRDM6Q9NQX0 595 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 MED31Q9Y3C7 131 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 ETV7Q9Y603 341 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 A0A1W2PPC4 97 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms