RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 ICOSLGO75144 302 aa13.16□□□□□ -0.3
MSH5-201ENST00000375703 CCKBRP32239 447 aa13.16□□□□□ -0.3
MSH5-201ENST00000375703 CAPZBP47756 277 aa13.16□□□□□ -0.3
MSH5-201ENST00000375703 GABRA4P48169 554 aa13.16□□□□□ -0.3
MSH5-201ENST00000375703 POU3F4P49335 361 aa13.16□□□□□ -0.3
MSH5-201ENST00000375703 MEP1BQ16820 701 aa13.16□□□□□ -0.3
MSH5-201ENST00000375703 C2orf76Q3KRA6 126 aa13.16□□□□□ -0.3
MSH5-201ENST00000375703 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.16□□□□□ -0.3
MSH5-201ENST00000375703 YOD1Q5VVQ6 348 aaPredicted RBP13.16□□□□□ -0.3
MSH5-201ENST00000375703 C1QL3Q5VWW1 255 aa13.16□□□□□ -0.3
MSH5-201ENST00000375703 SLC35D2Q76EJ3 337 aa13.16□□□□□ -0.3
MSH5-201ENST00000375703 OR4D10Q8NGI6 311 aa13.16□□□□□ -0.3
MSH5-201ENST00000375703 SLC25A36Q96CQ1 311 aa13.16□□□□□ -0.3
MSH5-201ENST00000375703 FOXN4Q96NZ1 517 aa13.16□□□□□ -0.3
MSH5-201ENST00000375703 SLC38A3Q99624 504 aa13.16□□□□□ -0.3
MSH5-201ENST00000375703 RTN4RQ9BZR6 473 aa13.16□□□□□ -0.3
MSH5-201ENST00000375703 C8orf33Q9H7E9 229 aaPredicted RBP13.16□□□□□ -0.3
MSH5-201ENST00000375703 C12orf10Q9HB07 376 aa13.16□□□□□ -0.3
MSH5-201ENST00000375703 TUBAL3A6NHL2 446 aa13.15□□□□□ -0.3
MSH5-201ENST00000375703 HSPB2A8KAH6 182 aa13.15□□□□□ -0.3
MSH5-201ENST00000375703 SIX6O95475 246 aa13.15□□□□□ -0.3
MSH5-201ENST00000375703 GTF2F2P13984 249 aa13.15□□□□□ -0.3
MSH5-201ENST00000375703 SLC6A8P48029 635 aa13.15□□□□□ -0.3
MSH5-201ENST00000375703 GUCA2AQ02747 115 aa13.15□□□□□ -0.3
MSH5-201ENST00000375703 ZNF117Q03924 483 aa13.15□□□□□ -0.3
MSH5-201ENST00000375703 SLC17A1Q14916 467 aa13.15□□□□□ -0.3
MSH5-201ENST00000375703 TOMM34Q15785 309 aaPredicted RBP13.15□□□□□ -0.3
MSH5-201ENST00000375703 HSPB2Q16082 182 aa13.15□□□□□ -0.3
MSH5-201ENST00000375703 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.15□□□□□ -0.3
MSH5-201ENST00000375703 TGM7Q96PF1 710 aa13.15□□□□□ -0.3
MSH5-201ENST00000375703 GAL3ST4Q96RP7 486 aa13.15□□□□□ -0.3
MSH5-201ENST00000375703 KIF25Q9UIL4 384 aa13.15□□□□□ -0.3
MSH5-201ENST00000375703 GTF2A1LQ9UNN4 478 aa13.15□□□□□ -0.3
MSH5-201ENST00000375703 IGHV5-51A0A0C4DH38 117 aa13.15□□□□□ -0.3
MSH5-201ENST00000375703 MEIS3P1A6NDR6 274 aa13.15□□□□□ -0.3
MSH5-201ENST00000375703 FRG2CA6NGY1 282 aa13.15□□□□□ -0.3
MSH5-201ENST00000375703 RAD1O60671 282 aa13.15□□□□□ -0.3
MSH5-201ENST00000375703 RGS11O94810 467 aa13.15□□□□□ -0.3
MSH5-201ENST00000375703 NUDT14O95848 222 aa13.15□□□□□ -0.3
MSH5-201ENST00000375703 BGLAPP02818 100 aa13.15□□□□□ -0.3
MSH5-201ENST00000375703 FCER2P06734 321 aa13.15□□□□□ -0.3
MSH5-201ENST00000375703 ITGA5P08648 1049 aa13.15□□□□□ -0.3
MSH5-201ENST00000375703 OR5M1Q8NGP8 315 aa13.15□□□□□ -0.3
MSH5-201ENST00000375703 METTL21AQ8WXB1 218 aa13.15□□□□□ -0.3
MSH5-201ENST00000375703 ATOH1Q92858 354 aaPredicted RBP13.15□□□□□ -0.3
MSH5-201ENST00000375703 RBPMSQ93062 196 aaKnown RBP13.15□□□□□ -0.3
MSH5-201ENST00000375703 FAM3DQ96BQ1 224 aa13.15□□□□□ -0.3
MSH5-201ENST00000375703 PDE7BQ9NP56 450 aa13.15□□□□□ -0.3
MSH5-201ENST00000375703 GPR27Q9NS67 375 aa13.15□□□□□ -0.3
MSH5-201ENST00000375703 LANCL2Q9NS86 450 aa13.15□□□□□ -0.3
MSH5-201ENST00000375703 B9D1Q9UPM9 204 aa13.15□□□□□ -0.3
MSH5-201ENST00000375703 TDRD6O60522 2096 aaKnown RBP13.15□□□□□ -0.3
MSH5-201ENST00000375703 MPDZO75970 2070 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 CDC14CA4D256 554 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 OR6A2O95222 327 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 PLGP00747 810 aaPredicted RBP13.14□□□□□ -0.31
MSH5-201ENST00000375703 AKAIN1P0CW23 69 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 PRSS3P35030 304 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 SEC61A1P61619 476 aaKnown RBP13.14□□□□□ -0.31
MSH5-201ENST00000375703 OC90Q02509 493 aaPredicted RBP13.14□□□□□ -0.31
MSH5-201ENST00000375703 MFSD13AQ14CX5 517 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 RAB11BQ15907 218 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 NKAIN2Q5VXU1 208 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 FDX2Q6P4F2 183 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 MARCH3Q86UD3 253 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 ADGRG3Q86Y34 549 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 FAM160A2Q8N612 972 aaPredicted RBP13.14□□□□□ -0.31
MSH5-201ENST00000375703 OR51S1Q8NGJ8 323 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 THRSPQ92748 146 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 PPP1R14AQ96A00 147 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 PNPLA2Q96AD5 504 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 OR8B4Q96RC9 309 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 SLC7A5P2Q9GIP4 190 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 NRSN2Q9GZP1 204 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 SLC22A13Q9Y226 551 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 MYO9BQ13459 2157 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 SZT2Q5T011 3432 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 TRAV36DV7A0A075B6V5 113 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 TMEM150CB9EJG8 249 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 SLC25A12O75746 678 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 OR1D4P47884 311 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 GFERP55789 205 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 H2BFSP57053 126 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 C2orf68Q2NKX9 166 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 TMEM65Q6PI78 240 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 BIVMQ86UB2 503 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 ZNF679Q8IYX0 411 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.14□□□□□ -0.31
MSH5-201ENST00000375703 OR6N1Q8NGY5 312 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 ADIPOR1Q96A54 375 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 KCNK15Q9H427 330 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 KNL1Q8NG31 2342 aa13.14□□□□□ -0.31
MSH5-201ENST00000375703 C17orf51A8MQB3 221 aa13.13□□□□□ -0.31
MSH5-201ENST00000375703 SUSD5O60279 629 aa13.13□□□□□ -0.31
MSH5-201ENST00000375703 CDC40O60508 579 aaKnown RBP eCLIP13.13□□□□□ -0.31
MSH5-201ENST00000375703 KDM4BO94953 1096 aa13.13□□□□□ -0.31
MSH5-201ENST00000375703 IL12BP29460 328 aa13.13□□□□□ -0.31
MSH5-201ENST00000375703 S100A11P31949 105 aa13.13□□□□□ -0.31
MSH5-201ENST00000375703 FASLGP48023 281 aa13.13□□□□□ -0.31
MSH5-201ENST00000375703 HLXQ14774 488 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms