RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 SAGP10523 405 aaPredicted RBP13.46□□□□□ -0.25
SDHB-201ENST00000375499 CDAP32320 146 aa13.46□□□□□ -0.25
SDHB-201ENST00000375499 DAP3P51398 398 aaKnown RBP13.46□□□□□ -0.25
SDHB-201ENST00000375499 RAB1AP62820 205 aa13.46□□□□□ -0.25
SDHB-201ENST00000375499 RAB35Q15286 201 aa13.46□□□□□ -0.25
SDHB-201ENST00000375499 EFNB3Q15768 340 aa13.46□□□□□ -0.25
SDHB-201ENST00000375499 C10orf128Q5T292 105 aa13.46□□□□□ -0.25
SDHB-201ENST00000375499 ZNF730Q6ZMV8 503 aa13.46□□□□□ -0.25
SDHB-201ENST00000375499 MBOAT2Q6ZWT7 520 aa13.46□□□□□ -0.25
SDHB-201ENST00000375499 PIWIL3Q7Z3Z3 882 aaKnown RBP13.46□□□□□ -0.25
SDHB-201ENST00000375499 HIPK1Q86Z02 1210 aa13.46□□□□□ -0.25
SDHB-201ENST00000375499 PAQR4Q8N4S7 273 aaPredicted RBP13.46□□□□□ -0.25
SDHB-201ENST00000375499 SLC7A13Q8TCU3 470 aa13.46□□□□□ -0.25
SDHB-201ENST00000375499 TSPAN32Q96QS1 320 aa13.46□□□□□ -0.25
SDHB-201ENST00000375499 TNFRSF13CQ96RJ3 184 aa13.46□□□□□ -0.25
SDHB-201ENST00000375499 KCNK17Q96T54 332 aa13.46□□□□□ -0.25
SDHB-201ENST00000375499 TXNIPQ9H3M7 391 aa13.46□□□□□ -0.25
SDHB-201ENST00000375499 PLK3Q9H4B4 646 aa13.46□□□□□ -0.25
SDHB-201ENST00000375499 ZNF442Q9H7R0 627 aa13.46□□□□□ -0.25
SDHB-201ENST00000375499 CD300AQ9UGN4 299 aa13.46□□□□□ -0.25
SDHB-201ENST00000375499 TAGLN3Q9UI15 199 aa13.46□□□□□ -0.25
SDHB-201ENST00000375499 ZNF346Q9UL40 294 aaKnown RBP13.46□□□□□ -0.25
SDHB-201ENST00000375499 TRBV4-1A0A0J9YWV2 114 aa13.45□□□□□ -0.26
SDHB-201ENST00000375499 NPIPB13A6NJU9 1138 aa13.45□□□□□ -0.26
SDHB-201ENST00000375499 EFCAB9A8MZ26 197 aa13.45□□□□□ -0.26
SDHB-201ENST00000375499 NPIPB4C9JG80 1138 aa13.45□□□□□ -0.26
SDHB-201ENST00000375499 UBL3O95164 117 aa13.45□□□□□ -0.26
SDHB-201ENST00000375499 RAB36O95755 333 aa13.45□□□□□ -0.26
SDHB-201ENST00000375499 F12P00748 615 aaPredicted RBP13.45□□□□□ -0.26
SDHB-201ENST00000375499 TP53P04637 393 aaPredicted RBP13.45□□□□□ -0.26
SDHB-201ENST00000375499 OR8G3PP0DMU2 310 aa13.45□□□□□ -0.26
SDHB-201ENST00000375499 HSD17B1P14061 328 aa13.45□□□□□ -0.26
SDHB-201ENST00000375499 CTXN1P60606 82 aa13.45□□□□□ -0.26
SDHB-201ENST00000375499 SNRPD2P62316 118 aaKnown RBP13.45□□□□□ -0.26
SDHB-201ENST00000375499 CHRNB3Q05901 458 aa13.45□□□□□ -0.26
SDHB-201ENST00000375499 DAG1Q14118 895 aa13.45□□□□□ -0.26
SDHB-201ENST00000375499 SEC23BQ15437 767 aa13.45□□□□□ -0.26
SDHB-201ENST00000375499 CDK20Q8IZL9 346 aa13.45□□□□□ -0.26
SDHB-201ENST00000375499 ZCCHC24Q8N2G6 241 aaKnown RBP13.45□□□□□ -0.26
SDHB-201ENST00000375499 SVOPLQ8N434 492 aa13.45□□□□□ -0.26
SDHB-201ENST00000375499 ZNF519Q8TB69 540 aa13.45□□□□□ -0.26
SDHB-201ENST00000375499 NABP1Q96AH0 204 aa13.45□□□□□ -0.26
SDHB-201ENST00000375499 LRRC37BQ96QE4 947 aa13.45□□□□□ -0.26
SDHB-201ENST00000375499 RPS6KA6Q9UK32 745 aa13.45□□□□□ -0.26
SDHB-201ENST00000375499 CENPBD1B2RD01 187 aa13.44□□□□□ -0.26
SDHB-201ENST00000375499 B9A039 149 aa13.44□□□□□ -0.26
SDHB-201ENST00000375499 H7C1C5 153 aa13.44□□□□□ -0.26
SDHB-201ENST00000375499 ARPC2O15144 300 aa13.44□□□□□ -0.26
SDHB-201ENST00000375499 CCL2P13500 99 aa13.44□□□□□ -0.26
SDHB-201ENST00000375499 NPR2P20594 1047 aa13.44□□□□□ -0.26
SDHB-201ENST00000375499 NR4A1P22736 598 aa13.44□□□□□ -0.26
SDHB-201ENST00000375499 IFNA8P32881 189 aa13.44□□□□□ -0.26
SDHB-201ENST00000375499 LIMS1P48059 325 aa13.44□□□□□ -0.26
SDHB-201ENST00000375499 EFNA4P52798 201 aa13.44□□□□□ -0.26
SDHB-201ENST00000375499 RPL27P61353 136 aaKnown RBP13.44□□□□□ -0.26
SDHB-201ENST00000375499 LCN6P62502 163 aa13.44□□□□□ -0.26
SDHB-201ENST00000375499 CD47Q08722 323 aa13.44□□□□□ -0.26
SDHB-201ENST00000375499 SLC25A47Q6Q0C1 308 aa13.44□□□□□ -0.26
SDHB-201ENST00000375499 PHC2Q8IXK0 858 aa13.44□□□□□ -0.26
SDHB-201ENST00000375499 RNF113BQ8IZP6 322 aaKnown RBP13.44□□□□□ -0.26
SDHB-201ENST00000375499 LRRC18Q8N456 261 aa13.44□□□□□ -0.26
SDHB-201ENST00000375499 FITM2Q8N6M3 262 aa13.44□□□□□ -0.26
SDHB-201ENST00000375499 C10orf105Q8TEF2 133 aa13.44□□□□□ -0.26
SDHB-201ENST00000375499 NSMAFQ92636 917 aa13.44□□□□□ -0.26
SDHB-201ENST00000375499 FAM46AQ96IP4 442 aaKnown RBP13.44□□□□□ -0.26
SDHB-201ENST00000375499 DHRS1Q96LJ7 313 aa13.44□□□□□ -0.26
SDHB-201ENST00000375499 CCT8L2Q96SF2 557 aa13.44□□□□□ -0.26
SDHB-201ENST00000375499 CDRT15Q96T59 188 aa13.44□□□□□ -0.26
SDHB-201ENST00000375499 DOK1Q99704 481 aa13.44□□□□□ -0.26
SDHB-201ENST00000375499 FUZQ9BT04 418 aa13.44□□□□□ -0.26
SDHB-201ENST00000375499 MRPL37Q9BZE1 423 aaKnown RBP13.44□□□□□ -0.26
SDHB-201ENST00000375499 GORASP2Q9H8Y8 452 aa13.44□□□□□ -0.26
SDHB-201ENST00000375499 ADAM18Q9Y3Q7 739 aa13.44□□□□□ -0.26
SDHB-201ENST00000375499 PMF1-BGLAPU3KQ54 211 aa13.44□□□□□ -0.26
SDHB-201ENST00000375499 A0A1W2PRQ8 180 aa13.43□□□□□ -0.26
SDHB-201ENST00000375499 DCTN3O75935 186 aa13.43□□□□□ -0.26
SDHB-201ENST00000375499 SERPINA5P05154 406 aa13.43□□□□□ -0.26
SDHB-201ENST00000375499 H1F0P07305 194 aaKnown RBP13.43□□□□□ -0.26
SDHB-201ENST00000375499 MMP7P09237 267 aaPredicted RBP13.43□□□□□ -0.26
SDHB-201ENST00000375499 RHCEP18577 417 aa13.43□□□□□ -0.26
SDHB-201ENST00000375499 OMPP47874 163 aa13.43□□□□□ -0.26
SDHB-201ENST00000375499 FXYD6P3P58550 94 aa13.43□□□□□ -0.26
SDHB-201ENST00000375499 ERVK-25P63136 954 aa13.43□□□□□ -0.26
SDHB-201ENST00000375499 DGCR6Q14129 220 aa13.43□□□□□ -0.26
SDHB-201ENST00000375499 FGD3Q5JSP0 725 aa13.43□□□□□ -0.26
SDHB-201ENST00000375499 CLEC2AQ6UVW9 174 aa13.43□□□□□ -0.26
SDHB-201ENST00000375499 TMPRSS11FQ6ZWK6 438 aa13.43□□□□□ -0.26
SDHB-201ENST00000375499 HDDC2Q7Z4H3 204 aa13.43□□□□□ -0.26
SDHB-201ENST00000375499 OAFQ86UD1 273 aa13.43□□□□□ -0.26
SDHB-201ENST00000375499 LRP11Q86VZ4 500 aa13.43□□□□□ -0.26
SDHB-201ENST00000375499 DEFB107AQ8IZN7 70 aa13.43□□□□□ -0.26
SDHB-201ENST00000375499 IL17RDQ8NFM7 739 aa13.43□□□□□ -0.26
SDHB-201ENST00000375499 GPA33Q99795 319 aa13.43□□□□□ -0.26
SDHB-201ENST00000375499 VRK1Q99986 396 aaPredicted RBP13.43□□□□□ -0.26
SDHB-201ENST00000375499 ANKRD19PQ9H560 264 aa13.43□□□□□ -0.26
SDHB-201ENST00000375499 MYEF2Q9P2K5 600 aaKnown RBP13.43□□□□□ -0.26
SDHB-201ENST00000375499 MAGEL2Q9UJ55 1249 aa13.43□□□□□ -0.26
SDHB-201ENST00000375499 FZR1Q9UM11 496 aa13.43□□□□□ -0.26
SDHB-201ENST00000375499 SAMD4AQ9UPU9 718 aaKnown RBP13.43□□□□□ -0.26
SDHB-201ENST00000375499 SH3PXD2BA1X283 911 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms