RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 EDN3P14138 238 aa16.34■□□□□ 0.21
PTPDC1-202ENST00000375360 FAM27D1Q5T7N8 215 aa16.34■□□□□ 0.21
PTPDC1-202ENST00000375360 CLDN22Q8N7P3 220 aa16.34■□□□□ 0.21
PTPDC1-202ENST00000375360 PIGTQ969N2 578 aa16.34■□□□□ 0.21
PTPDC1-202ENST00000375360 MAN2C1Q9NTJ4 1040 aa16.34■□□□□ 0.21
PTPDC1-202ENST00000375360 B3GALT1Q9Y5Z6 326 aa16.34■□□□□ 0.21
PTPDC1-202ENST00000375360 SRMP19623 302 aa16.34■□□□□ 0.21
PTPDC1-202ENST00000375360 HTR2CP28335 458 aa16.34■□□□□ 0.21
PTPDC1-202ENST00000375360 ZXDCQ2QGD7 858 aaPredicted RBP16.34■□□□□ 0.21
PTPDC1-202ENST00000375360 APOOLQ6UXV4 268 aa16.34■□□□□ 0.21
PTPDC1-202ENST00000375360 BPHLQ86WA6 291 aaPredicted RBP16.34■□□□□ 0.21
PTPDC1-202ENST00000375360 OCIAD1Q9NX40 245 aa16.34■□□□□ 0.21
PTPDC1-202ENST00000375360 TEX51A0A1B0GUA7 166 aa16.33■□□□□ 0.21
PTPDC1-202ENST00000375360 HSPB6O14558 160 aa16.33■□□□□ 0.21
PTPDC1-202ENST00000375360 SLC22A5O76082 557 aa16.33■□□□□ 0.21
PTPDC1-202ENST00000375360 BDKRB2P30411 391 aa16.33■□□□□ 0.21
PTPDC1-202ENST00000375360 EIF5AP63241 154 aaKnown RBP16.33■□□□□ 0.21
PTPDC1-202ENST00000375360 FGFBP1Q14512 234 aa16.33■□□□□ 0.21
PTPDC1-202ENST00000375360 SLC35D3Q5M8T2 416 aa16.33■□□□□ 0.21
PTPDC1-202ENST00000375360 MRM1Q6IN84 353 aaKnown RBP16.33■□□□□ 0.21
PTPDC1-202ENST00000375360 MAML2Q8IZL2 1156 aaPredicted RBP16.33■□□□□ 0.21
PTPDC1-202ENST00000375360 OR4Q3Q8NH05 313 aa16.33■□□□□ 0.21
PTPDC1-202ENST00000375360 SPACA5Q96QH8 159 aa16.33■□□□□ 0.21
PTPDC1-202ENST00000375360 DNTTIP1Q9H147 329 aa16.33■□□□□ 0.21
PTPDC1-202ENST00000375360 DNAJB11Q9UBS4 358 aa16.33■□□□□ 0.21
PTPDC1-202ENST00000375360 KCNG2Q9UJ96 466 aa16.33■□□□□ 0.21
PTPDC1-202ENST00000375360 TRBV5-3A0A0A0MS03 114 aa16.33■□□□□ 0.2
PTPDC1-202ENST00000375360 IGHV3-64DA0A0J9YX35 117 aa16.33■□□□□ 0.2
PTPDC1-202ENST00000375360 PRAMEF27A3QJZ7 478 aa16.33■□□□□ 0.2
PTPDC1-202ENST00000375360 HMX3A6NHT5 357 aa16.33■□□□□ 0.2
PTPDC1-202ENST00000375360 PCBP3P57721 371 aaKnown RBP16.33■□□□□ 0.2
PTPDC1-202ENST00000375360 UBE2IP63279 158 aaKnown RBP16.33■□□□□ 0.2
PTPDC1-202ENST00000375360 ZNF585AQ6P3V2 769 aa16.33■□□□□ 0.2
PTPDC1-202ENST00000375360 DEFB124Q8NES8 71 aa16.33■□□□□ 0.2
PTPDC1-202ENST00000375360 ST8SIA1Q92185 356 aa16.33■□□□□ 0.2
PTPDC1-202ENST00000375360 MFRPQ9BY79 579 aa16.33■□□□□ 0.2
PTPDC1-202ENST00000375360 LIN7BQ9HAP6 207 aa16.33■□□□□ 0.2
PTPDC1-202ENST00000375360 RDH8Q9NYR8 311 aa16.33■□□□□ 0.2
PTPDC1-202ENST00000375360 MBD2Q9UBB5 411 aa16.33■□□□□ 0.2
PTPDC1-202ENST00000375360 DUSP13Q9UII6 198 aa16.33■□□□□ 0.2
PTPDC1-202ENST00000375360 SPTBN1Q01082 2364 aaKnown RBP16.33■□□□□ 0.2
PTPDC1-202ENST00000375360 LSM11P83369 360 aaKnown RBP eCLIP16.33■□□□□ 0.2
PTPDC1-202ENST00000375360 PRSS45Q7RTY3 260 aa16.33■□□□□ 0.2
PTPDC1-202ENST00000375360 TMEM52Q8NDY8 209 aa16.33■□□□□ 0.2
PTPDC1-202ENST00000375360 MRI1Q9BV20 369 aa16.33■□□□□ 0.2
PTPDC1-202ENST00000375360 P4HTMQ9NXG6 502 aa16.33■□□□□ 0.2
PTPDC1-202ENST00000375360 MYO16Q9Y6X6 1858 aa16.33■□□□□ 0.2
PTPDC1-202ENST00000375360 DOCK8Q8NF50 2099 aa16.33■□□□□ 0.2
PTPDC1-202ENST00000375360 A0A087WUJ7 227 aa16.33■□□□□ 0.2
PTPDC1-202ENST00000375360 IGKV1-8A0A0C4DH67 115 aa16.33■□□□□ 0.2
PTPDC1-202ENST00000375360 I3L521 148 aa16.33■□□□□ 0.2
PTPDC1-202ENST00000375360 MTNR1BP49286 362 aa16.33■□□□□ 0.2
PTPDC1-202ENST00000375360 RELAQ04206 551 aa16.33■□□□□ 0.2
PTPDC1-202ENST00000375360 CDK10Q15131 360 aa16.33■□□□□ 0.2
PTPDC1-202ENST00000375360 ARHGDIGQ99819 225 aa16.33■□□□□ 0.2
PTPDC1-202ENST00000375360 PCOLCE2Q9UKZ9 415 aa16.33■□□□□ 0.2
PTPDC1-202ENST00000375360 SLC22A13Q9Y226 551 aa16.33■□□□□ 0.2
PTPDC1-202ENST00000375360 PLSCR5A0PG75 271 aa16.32■□□□□ 0.2
PTPDC1-202ENST00000375360 ZAR1Q86SH2 424 aa16.32■□□□□ 0.2
PTPDC1-202ENST00000375360 GJC3Q8NFK1 279 aa16.32■□□□□ 0.2
PTPDC1-202ENST00000375360 SORCS2Q96PQ0 1159 aa16.32■□□□□ 0.2
PTPDC1-202ENST00000375360 DPCDQ9BVM2 203 aaPredicted RBP16.32■□□□□ 0.2
PTPDC1-202ENST00000375360 OR14J1Q9UGF5 321 aa16.32■□□□□ 0.2
PTPDC1-202ENST00000375360 ZNF175Q9Y473 711 aa16.32■□□□□ 0.2
PTPDC1-202ENST00000375360 LOC285556D6RIA3 1793 aa16.32■□□□□ 0.2
PTPDC1-202ENST00000375360 ZNF587BE7ETH6 402 aa16.32■□□□□ 0.2
PTPDC1-202ENST00000375360 H7C417 338 aa16.32■□□□□ 0.2
PTPDC1-202ENST00000375360 GUSBP08236 651 aa16.32■□□□□ 0.2
PTPDC1-202ENST00000375360 PIPP12273 146 aaPredicted RBP16.32■□□□□ 0.2
PTPDC1-202ENST00000375360 CD34P28906 385 aa16.32■□□□□ 0.2
PTPDC1-202ENST00000375360 ZNF117Q03924 483 aa16.32■□□□□ 0.2
PTPDC1-202ENST00000375360 SIGLEC14Q08ET2 396 aa16.32■□□□□ 0.2
PTPDC1-202ENST00000375360 SELENBP1Q13228 472 aa16.32■□□□□ 0.2
PTPDC1-202ENST00000375360 TATDN3Q17R31 274 aa16.32■□□□□ 0.2
PTPDC1-202ENST00000375360 C3orf49Q96BT1 292 aa16.32■□□□□ 0.2
PTPDC1-202ENST00000375360 IL20Q9NYY1 176 aa16.32■□□□□ 0.2
PTPDC1-202ENST00000375360 LUZP4Q9P127 313 aa16.32■□□□□ 0.2
PTPDC1-202ENST00000375360 DEFB109BQ30KR1 87 aa16.32■□□□□ 0.2
PTPDC1-202ENST00000375360 LCN10Q6JVE6 187 aa16.32■□□□□ 0.2
PTPDC1-202ENST00000375360 OVCH1Q7RTY7 1134 aa16.32■□□□□ 0.2
PTPDC1-202ENST00000375360 MUCL1Q96DR8 90 aa16.32■□□□□ 0.2
PTPDC1-202ENST00000375360 HINT2Q9BX68 163 aa16.32■□□□□ 0.2
PTPDC1-202ENST00000375360 IRF2P14316 349 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 ATP1B3P54709 279 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 ARL6IP1Q15041 203 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 FAM71CQ8NEG0 241 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 COQ8AQ8NI60 647 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 MNTQ99583 582 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 A0A096LPE4 126 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 A0A1W2PPZ6 126 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 TMEM221A6NGB7 291 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 M0R296 226 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 HRO43593 1189 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 MT-CO3P00414 261 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 PDGFBP01127 241 aaPredicted RBP16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 IGHA2P01877 340 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 RAB40ALP0C0E4 278 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 AKR1C2P52895 323 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 CNN3Q15417 329 aaKnown RBP16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 RAB12Q6IQ22 244 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms