RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 IGKV1D-16P01601 117 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 SMIM10L1P0DMW3 83 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 MGMTP16455 207 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 RPL35P42766 123 aaKnown RBP10.06□□□□□ -0.8
CCDC40-203ENST00000374877 PSMD4P55036 377 aaKnown RBP10.06□□□□□ -0.8
CCDC40-203ENST00000374877 OTPQ5XKR4 325 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 ANKRD16Q6P6B7 361 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 TMEM17Q86X19 198 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 MCATQ8IVS2 390 aaKnown RBP10.06□□□□□ -0.8
CCDC40-203ENST00000374877 C12orf45Q8N5I9 185 aaPredicted RBP10.06□□□□□ -0.8
CCDC40-203ENST00000374877 TMEM185AQ8NFB2 350 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 TSEN15Q8WW01 171 aaKnown RBP10.06□□□□□ -0.8
CCDC40-203ENST00000374877 ATOH1Q92858 354 aaPredicted RBP10.06□□□□□ -0.8
CCDC40-203ENST00000374877 SLC25A28Q96A46 364 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 SMIM10Q96HG1 83 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 PDCD10Q9BUL8 212 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 ZNF471Q9BX82 626 aaPredicted RBP10.06□□□□□ -0.8
CCDC40-203ENST00000374877 NMNAT2Q9BZQ4 307 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 LAMP5Q9UJQ1 280 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 ZNF337Q9Y3M9 751 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 MTRF1O75570 445 aaKnown RBP10.06□□□□□ -0.8
CCDC40-203ENST00000374877 NKX2-2O95096 273 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 IGHV4-34P06331 123 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 ATXN8OSP0DMR3 200 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 PVRP15151 417 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 EIF2B5Q13144 721 aaKnown RBP10.06□□□□□ -0.8
CCDC40-203ENST00000374877 ZNHIT3Q15649 155 aaPredicted RBP10.06□□□□□ -0.8
CCDC40-203ENST00000374877 MPPED2Q15777 294 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 EXOSC6Q5RKV6 272 aaKnown RBP10.06□□□□□ -0.8
CCDC40-203ENST00000374877 ZNF684Q5T5D7 378 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 ZNF550Q7Z398 422 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 CAMKVQ8NCB2 501 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 STEAP2Q8NFT2 490 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 RERGQ96A58 199 aaPredicted RBP10.06□□□□□ -0.8
CCDC40-203ENST00000374877 BMFQ96LC9 184 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 WDR92Q96MX6 357 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 ZNF75AQ96N20 296 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 ATG5Q9H1Y0 275 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.06□□□□□ -0.8
CCDC40-203ENST00000374877 RASL12Q9NYN1 266 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 HEBP2Q9Y5Z4 205 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 IGHV1OR15-9A0A0B4J2B8 117 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 M0QYG6 137 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 ARPC3O15145 178 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 OR4E1P0C645 316 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 LIPCP11150 499 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 PSG6Q00889 435 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 FLI1Q01543 452 aaPredicted RBP10.05□□□□□ -0.8
CCDC40-203ENST00000374877 MGAT2Q10469 447 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 PRRT3Q5FWE3 981 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 NKAIN2Q5VXU1 208 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 FIGLAQ6QHK4 219 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 SLC16A9Q7RTY1 509 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 SDR16C5Q8N3Y7 309 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 ZNF417Q8TAU3 575 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 CCDC107Q8WV48 283 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 LMF1Q96S06 567 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 WDR13Q9H1Z4 485 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 SLC39A1Q9NY26 324 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 FBXO4Q9UKT5 387 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 SLC6A5Q9Y345 797 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 SZT2Q5T011 3432 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 MPDZO75970 2070 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 TMEM82A0PJX8 343 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 ELOA3DA6NLF2 546 aaPredicted RBP10.05□□□□□ -0.8
CCDC40-203ENST00000374877 CSTAP01040 98 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 F13BP05160 661 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 RABIFP47224 123 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 AKR1C2P52895 323 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 AKR1C1Q04828 323 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 SRSF5Q13243 272 aaKnown RBP10.05□□□□□ -0.8
CCDC40-203ENST00000374877 TAF13Q15543 124 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 ELOA3BQ3SY89 546 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 CLVS2Q5SYC1 327 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 ARHGAP40Q5TG30 622 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 SHEQ5VZ18 495 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 TMEM88Q6PEY1 159 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 LINC00114Q6XXX2 140 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 DNM1P46Q6ZS02 220 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 GATSQ8NAP1 163 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 ELOA3Q8NG57 546 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 OR2G2Q8NGZ5 317 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 GPR148Q8TDV2 347 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 TM4SF19Q96DZ7 209 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 STARD5Q9NSY2 213 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 HEATR5AQ86XA9 2040 aa10.05□□□□□ -0.8
CCDC40-203ENST00000374877 TRBV5-5A0A0J9YX44 114 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 H0YGG7 62 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 DCTN6O00399 190 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 CCSO14618 274 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 RAB3DO95716 219 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 CSN2P05814 226 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 AGTR1P30556 359 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 CCKBRP32239 447 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 MAP3K8P41279 467 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 GRK6P43250 576 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 CCR4P51679 360 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 CTXN1P60606 82 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 ARF3P61204 181 aaPredicted RBP10.04□□□□□ -0.8
CCDC40-203ENST00000374877 ZNF627Q7L945 461 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 393.2 ms