RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 BPHLQ86WA6 291 aaPredicted RBP10.51□□□□□ -0.73
PTPRF-203ENST00000372407 CNEP1R1Q8N9A8 125 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 PLPP7Q8NBV4 271 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 SLC37A2Q8TED4 501 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 OR1E3Q8WZA6 343 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 MSI2Q96DH6 328 aaKnown RBP10.51□□□□□ -0.73
PTPRF-203ENST00000372407 FYTTD1Q96QD9 318 aaKnown RBP10.51□□□□□ -0.73
PTPRF-203ENST00000372407 OCSTAMPQ9BR26 566 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.51□□□□□ -0.73
PTPRF-203ENST00000372407 GPATCH2Q9NW75 528 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 OBP2AQ9NY56 170 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 NXT1Q9UKK6 140 aaKnown RBP10.51□□□□□ -0.73
PTPRF-203ENST00000372407 SPTA1P02549 2419 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 GPR171O14626 319 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 EIF4E2O60573 245 aaKnown RBP10.5□□□□□ -0.73
PTPRF-203ENST00000372407 IGLV3-27P01718 113 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 EPHA5P54756 1037 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 KIAA1024LP59773 190 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 DPTQ07507 201 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 AADACL3Q5VUY0 350 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 C1orf140Q5VVS0 124 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 FAM122BQ7Z309 247 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 ZNF610Q8N9Z0 462 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 FAM213BQ8TBF2 198 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 DVL3Q92997 716 aaPredicted RBP10.5□□□□□ -0.73
PTPRF-203ENST00000372407 RAB39BQ96DA2 213 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 RNF167Q9H6Y7 350 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 GPR160Q9UJ42 338 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 TMEM221A6NGB7 291 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 NSA2O95478 260 aaKnown RBP10.5□□□□□ -0.73
PTPRF-203ENST00000372407 ABHD16AO95870 558 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 ZNF728P0DKX0 622 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 NME2P22392 152 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 IKZF1Q13422 519 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 EBPQ15125 230 aaKnown RBP10.5□□□□□ -0.73
PTPRF-203ENST00000372407 HMGN3Q15651 99 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 C1orf53Q5VUE5 145 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 PRSS45Q7RTY3 260 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 GRINAQ7Z429 371 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 KDM8Q8N371 416 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 PXT1Q8NFP0 134 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 VN1R2Q8NFZ6 395 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 ZFPM2Q8WW38 1151 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 DCLRE1CQ96SD1 692 aaKnown RBP10.5□□□□□ -0.73
PTPRF-203ENST00000372407 SPHK1Q9NYA1 384 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 PISDQ9UG56 409 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 TRAPPC2LQ9UL33 140 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 TCRBV5S2A0A599 114 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 TMEM200CA6NKL6 621 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 SELENOFO60613 162 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 CD53P19397 219 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 HBG1P69891 147 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 HBG2P69892 147 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 CAMK2BQ13554 666 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 HSF5Q4G112 596 aaPredicted RBP10.5□□□□□ -0.73
PTPRF-203ENST00000372407 HIST2H3PS2Q5TEC6 136 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 RSPO2Q6UXX9 243 aaPredicted RBP10.5□□□□□ -0.73
PTPRF-203ENST00000372407 ANGPTL5Q86XS5 388 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 ST7LQ8TDW4 575 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 DDOQ99489 341 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 SGPP1Q9BX95 441 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 OR52A5Q9H2C5 316 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 BCL2L10Q9HD36 194 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 ISYNA1Q9NPH2 558 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 NDUFB11Q9NX14 153 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 OR14J1Q9UGF5 321 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 ZNF223Q9UK11 482 aaPredicted RBP10.5□□□□□ -0.73
PTPRF-203ENST00000372407 ICE1Q9Y2F5 2266 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 K7ESM1 405 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 SGCEO43556 437 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 SBK3P0C264 359 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 IGFBP6P24592 240 aaPredicted RBP10.5□□□□□ -0.73
PTPRF-203ENST00000372407 MAP2K6P52564 334 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 MRPS34P82930 218 aaKnown RBP10.5□□□□□ -0.73
PTPRF-203ENST00000372407 ZNF385BQ569K4 471 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 CYHR1Q6ZMK1 362 aa10.5□□□□□ -0.73
PTPRF-203ENST00000372407 H1FNTQ75WM6 255 aaPredicted RBP10.5□□□□□ -0.73
PTPRF-203ENST00000372407 RBPMSQ93062 196 aaKnown RBP10.5□□□□□ -0.73
PTPRF-203ENST00000372407 HSBP1L1C9JCN9 74 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 TSTD3H0UI37 97 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 CALCBP10092 127 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 CD46P15529 392 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 SNCAP37840 140 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 SSR4P51571 173 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 F2RL1P55085 397 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 SFRP5Q5T4F7 317 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 ANKRD34AQ69YU3 496 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 FCRL6Q6DN72 434 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 HEPHL1Q6MZM0 1159 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 RIMKLAQ8IXN7 391 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 SLC30A7Q8NEW0 376 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 GJC3Q8NFK1 279 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 CPNE4Q96A23 557 aaPredicted RBP10.49□□□□□ -0.73
PTPRF-203ENST00000372407 SLC35A4Q96G79 324 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 HS3ST3A1Q9Y663 406 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 NUP214P35658 2090 aaPredicted RBP10.49□□□□□ -0.73
PTPRF-203ENST00000372407 WDR90Q96KV7 1748 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 QSER1Q2KHR3 1735 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 FITM1A5D6W6 292 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 DOK2O60496 412 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms