RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 TMPRSS11AQ6ZMR5 421 aa21.22■□□□□ 0.99
SNX3-203ENST00000368979 CDC20BQ86Y33 519 aa21.22■□□□□ 0.99
SNX3-203ENST00000368979 TMEM123Q8N131 208 aa21.22■□□□□ 0.99
SNX3-203ENST00000368979 RNF128Q8TEB7 428 aa21.22■□□□□ 0.99
SNX3-203ENST00000368979 INTS14Q96SY0 518 aa21.22■□□□□ 0.99
SNX3-203ENST00000368979 YIPF3Q9GZM5 350 aa21.22■□□□□ 0.99
SNX3-203ENST00000368979 WDR76Q9H967 626 aa21.22■□□□□ 0.99
SNX3-203ENST00000368979 PLSCR2Q9NRY7 297 aa21.22■□□□□ 0.99
SNX3-203ENST00000368979 MRPL22Q9NWU5 206 aaKnown RBP21.22■□□□□ 0.99
SNX3-203ENST00000368979 ING1Q9UK53 422 aaPredicted RBP21.22■□□□□ 0.99
SNX3-203ENST00000368979 LHX6Q9UPM6 363 aa21.22■□□□□ 0.99
SNX3-203ENST00000368979 B3GNT3Q9Y2A9 372 aa21.22■□□□□ 0.99
SNX3-203ENST00000368979 C1QTNF9BB2RNN3 333 aa21.21■□□□□ 0.99
SNX3-203ENST00000368979 AKAP8O43823 692 aaKnown RBP21.21■□□□□ 0.99
SNX3-203ENST00000368979 GABARAPO95166 117 aa21.21■□□□□ 0.99
SNX3-203ENST00000368979 SYNGR4O95473 234 aa21.21■□□□□ 0.99
SNX3-203ENST00000368979 C1QTNF9P0C862 333 aa21.21■□□□□ 0.99
SNX3-203ENST00000368979 HSF2Q03933 536 aa21.21■□□□□ 0.99
SNX3-203ENST00000368979 SSX1Q16384 188 aa21.21■□□□□ 0.99
SNX3-203ENST00000368979 CNPY1Q3B7I2 92 aa21.21■□□□□ 0.99
SNX3-203ENST00000368979 P2RY8Q86VZ1 359 aa21.21■□□□□ 0.99
SNX3-203ENST00000368979 RAB2BQ8WUD1 216 aa21.21■□□□□ 0.99
SNX3-203ENST00000368979 TMEM54Q969K7 222 aa21.21■□□□□ 0.99
SNX3-203ENST00000368979 FOXN4Q96NZ1 517 aa21.21■□□□□ 0.99
SNX3-203ENST00000368979 MNTQ99583 582 aa21.21■□□□□ 0.99
SNX3-203ENST00000368979 ISG20L2Q9H9L3 353 aaKnown RBP21.21■□□□□ 0.99
SNX3-203ENST00000368979 MCTS1Q9ULC4 181 aaKnown RBP21.21■□□□□ 0.99
SNX3-203ENST00000368979 RCE1Q9Y256 329 aa21.21■□□□□ 0.99
SNX3-203ENST00000368979 TP53TG5Q9Y2B4 290 aa21.21■□□□□ 0.99
SNX3-203ENST00000368979 LOC400499M0QZD8 3231 aa21.21■□□□□ 0.99
SNX3-203ENST00000368979 IGKV3D-15A0A087WSY6 115 aa21.2■□□□□ 0.98
SNX3-203ENST00000368979 CCRL2O00421 344 aa21.2■□□□□ 0.98
SNX3-203ENST00000368979 GAAP10253 952 aa21.2■□□□□ 0.98
SNX3-203ENST00000368979 NR2C1P13056 603 aa21.2■□□□□ 0.98
SNX3-203ENST00000368979 RASGEF1BQ0VAM2 473 aa21.2■□□□□ 0.98
SNX3-203ENST00000368979 SLC25A47Q6Q0C1 308 aa21.2■□□□□ 0.98
SNX3-203ENST00000368979 C19orf48Q6RUI8 117 aa21.2■□□□□ 0.98
SNX3-203ENST00000368979 SLC26A10Q8NG04 563 aa21.2■□□□□ 0.98
SNX3-203ENST00000368979 OR6N2Q8NGY6 317 aa21.2■□□□□ 0.98
SNX3-203ENST00000368979 ABHD3Q8WU67 409 aa21.2■□□□□ 0.98
SNX3-203ENST00000368979 C12orf43Q96C57 262 aaKnown RBP21.2■□□□□ 0.98
SNX3-203ENST00000368979 PRDM14Q9GZV8 571 aa21.2■□□□□ 0.98
SNX3-203ENST00000368979 ZMIZ1Q9ULJ6 1067 aa21.2■□□□□ 0.98
SNX3-203ENST00000368979 ZNF670-ZNF695F2Z2N8 137 aa21.19■□□□□ 0.98
SNX3-203ENST00000368979 H3BMQ9 156 aa21.19■□□□□ 0.98
SNX3-203ENST00000368979 TAF4O00268 1085 aa21.19■□□□□ 0.98
SNX3-203ENST00000368979 AQP7O14520 342 aa21.19■□□□□ 0.98
SNX3-203ENST00000368979 LALBAP00709 142 aa21.19■□□□□ 0.98
SNX3-203ENST00000368979 HLA-DQA2P01906 255 aa21.19■□□□□ 0.98
SNX3-203ENST00000368979 PSKH1P11801 424 aa21.19■□□□□ 0.98
SNX3-203ENST00000368979 SELENOPP49908 381 aa21.19■□□□□ 0.98
SNX3-203ENST00000368979 ZNF133P52736 654 aaPredicted RBP21.19■□□□□ 0.98
SNX3-203ENST00000368979 CDONQ4KMG0 1287 aa21.19■□□□□ 0.98
SNX3-203ENST00000368979 MCHR2Q969V1 340 aa21.19■□□□□ 0.98
SNX3-203ENST00000368979 FOXD3Q9UJU5 478 aaPredicted RBP21.19■□□□□ 0.98
SNX3-203ENST00000368979 CEP295Q9C0D2 2601 aa21.19■□□□□ 0.98
SNX3-203ENST00000368979 NOL3O60936 208 aaKnown RBP21.19■□□□□ 0.98
SNX3-203ENST00000368979 WISP2O76076 250 aa21.19■□□□□ 0.98
SNX3-203ENST00000368979 CPEP16870 476 aa21.19■□□□□ 0.98
SNX3-203ENST00000368979 CSNK1A1P48729 337 aa21.19■□□□□ 0.98
SNX3-203ENST00000368979 ACTA2P62736 377 aa21.19■□□□□ 0.98
SNX3-203ENST00000368979 ACTG2P63267 376 aa21.19■□□□□ 0.98
SNX3-203ENST00000368979 CXADRP78310 365 aa21.19■□□□□ 0.98
SNX3-203ENST00000368979 BDH1Q02338 343 aa21.19■□□□□ 0.98
SNX3-203ENST00000368979 PLEKHN1Q494U1 663 aaPredicted RBP21.19■□□□□ 0.98
SNX3-203ENST00000368979 ATCAYQ86WG3 371 aa21.19■□□□□ 0.98
SNX3-203ENST00000368979 SYS1Q8N2H4 156 aa21.19■□□□□ 0.98
SNX3-203ENST00000368979 NSMAFQ92636 917 aa21.19■□□□□ 0.98
SNX3-203ENST00000368979 PNPLA2Q96AD5 504 aa21.19■□□□□ 0.98
SNX3-203ENST00000368979 TMEM45BQ96B21 275 aa21.19■□□□□ 0.98
SNX3-203ENST00000368979 C4orf36Q96KX1 117 aa21.19■□□□□ 0.98
SNX3-203ENST00000368979 BCL7BQ9BQE9 202 aa21.19■□□□□ 0.98
SNX3-203ENST00000368979 GLTPQ9NZD2 209 aa21.19■□□□□ 0.98
SNX3-203ENST00000368979 KLHL9Q9P2J3 617 aa21.19■□□□□ 0.98
SNX3-203ENST00000368979 CAMK2AQ9UQM7 478 aa21.19■□□□□ 0.98
SNX3-203ENST00000368979 KLHDC2Q9Y2U9 406 aa21.19■□□□□ 0.98
SNX3-203ENST00000368979 CFAP47Q6ZTR5 3102 aa21.18■□□□□ 0.98
SNX3-203ENST00000368979 MT-ND5P03915 603 aa21.18■□□□□ 0.98
SNX3-203ENST00000368979 HRGP04196 525 aa21.18■□□□□ 0.98
SNX3-203ENST00000368979 QDPRP09417 244 aa21.18■□□□□ 0.98
SNX3-203ENST00000368979 NTF4P34130 210 aa21.18■□□□□ 0.98
SNX3-203ENST00000368979 TPBGQ13641 420 aa21.18■□□□□ 0.98
SNX3-203ENST00000368979 CTF1Q16619 201 aa21.18■□□□□ 0.98
SNX3-203ENST00000368979 LRFN4Q6PJG9 635 aa21.18■□□□□ 0.98
SNX3-203ENST00000368979 UNQ6494/PRO21346Q6UXR6 183 aa21.18■□□□□ 0.98
SNX3-203ENST00000368979 DPY19L4Q7Z388 723 aa21.18■□□□□ 0.98
SNX3-203ENST00000368979 KLBQ86Z14 1044 aa21.18■□□□□ 0.98
SNX3-203ENST00000368979 GLB1L2Q8IW92 636 aa21.18■□□□□ 0.98
SNX3-203ENST00000368979 FNDC9Q8TBE3 224 aa21.18■□□□□ 0.98
SNX3-203ENST00000368979 INTS12Q96CB8 462 aaKnown RBP21.18■□□□□ 0.98
SNX3-203ENST00000368979 TTTY10Q9BZA0 68 aa21.18■□□□□ 0.98
SNX3-203ENST00000368979 NDUFB11Q9NX14 153 aa21.18■□□□□ 0.98
SNX3-203ENST00000368979 BABAM2Q9NXR7 383 aa21.18■□□□□ 0.98
SNX3-203ENST00000368979 FRYQ5TBA9 3013 aa21.17■□□□□ 0.98
SNX3-203ENST00000368979 PRR32B1ATL7 298 aa21.17■□□□□ 0.98
SNX3-203ENST00000368979 ZNF593O00488 134 aaPredicted RBP21.17■□□□□ 0.98
SNX3-203ENST00000368979 AQP8O94778 261 aa21.17■□□□□ 0.98
SNX3-203ENST00000368979 MPZL1O95297 269 aa21.17■□□□□ 0.98
SNX3-203ENST00000368979 ALOX5APP20292 161 aa21.17■□□□□ 0.98
SNX3-203ENST00000368979 CAPZA2P47755 286 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms