RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 BCL2L14Q9BZR8 327 aa9.65□□□□□ -0.87
TPM3-212ENST00000368533 ADAM18Q9Y3Q7 739 aa9.65□□□□□ -0.87
TPM3-212ENST00000368533 AKAP13Q12802 2813 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 A0A0B4J2E0 115 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 TEX13CA0A0J9YWL9 993 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 A0A1B0GX12 115 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 A0A1W2PNU3 283 aaPredicted RBP9.64□□□□□ -0.87
TPM3-212ENST00000368533 RAB19A4D1S5 217 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 BLACEA4D250 179 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 SLC22A31A6NKX4 558 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 NPIPB9F8W1W9 429 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 BLOC1S5-TXNDC5H3BN57 136 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 FLRT2O43155 660 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 LYPD3O95274 346 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 ALDOBP05062 364 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 ZNF3P17036 446 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 TCN2P20062 427 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 MST1P26927 711 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 INSM1Q01101 510 aaPredicted RBP9.64□□□□□ -0.87
TPM3-212ENST00000368533 HSD17B12Q53GQ0 312 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 ZNF527Q8NB42 609 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 MOSPD2Q8NHP6 518 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 BRIX1Q8TDN6 353 aaKnown RBP9.64□□□□□ -0.87
TPM3-212ENST00000368533 FN3KQ9H479 309 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 TMEM185BQ9H7F4 350 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 PARD6AQ9NPB6 346 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 MRPS18BQ9Y676 258 aaKnown RBP9.64□□□□□ -0.87
TPM3-212ENST00000368533 SPAARA0A1B0GVQ0 90 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 FRG2CA6NGY1 282 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 SLC19A2O60779 497 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 IL33O95760 270 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 GIFP27352 417 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 SLC6A1P30531 599 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 ERVK-25P63136 954 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 FOXK1P85037 733 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 NTRK2Q16620 822 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 ST3GAL2Q16842 350 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 KLHL26Q53HC5 615 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 PLA2G2CQ5R387 149 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 TIPARPQ7Z3E1 657 aaKnown RBP9.64□□□□□ -0.87
TPM3-212ENST00000368533 C17orf47Q8NEP4 570 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 SDR9C7Q8NEX9 313 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 CREB3L1Q96BA8 519 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 SLC25A36Q96CQ1 311 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 SLC6A15Q9H2J7 730 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 FOXJ2Q9P0K8 574 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 EDARQ9UNE0 448 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 PCDHGB7Q9Y5F8 929 aa9.64□□□□□ -0.87
TPM3-212ENST00000368533 DMXL2Q8TDJ6 3036 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 FAM171A2A8MVW0 826 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 BHLHE40O14503 412 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 ZNF264O43296 627 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 DHFRP00374 187 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 EIF4EP06730 217 aaKnown RBP9.63□□□□□ -0.87
TPM3-212ENST00000368533 HK1P19367 917 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 GPR143P51810 404 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 BAMBIQ13145 260 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 SQSTM1Q13501 440 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 OPCMLQ14982 345 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 ZNF141Q15928 474 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 ZNF528Q3MIS6 628 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 VASNQ6EMK4 673 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 NR2C2APQ86WQ0 139 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 ZFP82Q8N141 532 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 LNX2Q8N448 690 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 PLPP5Q8NEB5 264 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 DEFB124Q8NES8 71 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 ABHD4Q8TB40 342 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 HOXB13Q92826 284 aaPredicted RBP9.63□□□□□ -0.87
TPM3-212ENST00000368533 KCNJ15Q99712 375 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 ZNF559Q9BR84 538 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 ZNF649Q9BS31 505 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 THAP7Q9BT49 309 aaPredicted RBP9.63□□□□□ -0.87
TPM3-212ENST00000368533 ZNF160Q9HCG1 818 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 TMEM9BQ9NQ34 198 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 DLL4Q9NR61 685 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 MED11Q9P086 117 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 MLXQ9UH92 298 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 ZNF346Q9UL40 294 aaKnown RBP9.63□□□□□ -0.87
TPM3-212ENST00000368533 SLC35A3Q9Y2D2 325 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 NPFFR2Q9Y5X5 522 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 CACNG2Q9Y698 323 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 FREM3P0C091 2139 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 MED13Q9UHV7 2174 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 A0A0B4J203 849 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 ELOA3DA6NLF2 546 aaPredicted RBP9.63□□□□□ -0.87
TPM3-212ENST00000368533 PSMD9O00233 223 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 GPR171O14626 319 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 HPXP02790 462 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 UMODP07911 640 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 SBK2P0C263 348 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 FGF5P12034 268 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 TACR3P29371 465 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 ELOA3BQ3SY89 546 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 ACSM3Q53FZ2 586 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 SLC16A13Q7RTY0 426 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 RNF113BQ8IZP6 322 aaKnown RBP9.63□□□□□ -0.87
TPM3-212ENST00000368533 ELOA3Q8NG57 546 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 OR10G3Q8NGC4 313 aa9.63□□□□□ -0.87
TPM3-212ENST00000368533 OR6K6Q8NGW6 343 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms