RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 ZNF718Q3SXZ3 478 aa12.19□□□□□ -0.46
VAMP4-202ENST00000367740 UGT3A2Q3SY77 523 aa12.19□□□□□ -0.46
VAMP4-202ENST00000367740 COX20Q5RI15 118 aa12.19□□□□□ -0.46
VAMP4-202ENST00000367740 C6orf136Q5SQH8 315 aa12.19□□□□□ -0.46
VAMP4-202ENST00000367740 FAM69AQ5T7M9 428 aa12.19□□□□□ -0.46
VAMP4-202ENST00000367740 FOXB2Q5VYV0 432 aa12.19□□□□□ -0.46
VAMP4-202ENST00000367740 WDR88Q6ZMY6 472 aa12.19□□□□□ -0.46
VAMP4-202ENST00000367740 GDPGP1Q6ZNW5 385 aa12.19□□□□□ -0.46
VAMP4-202ENST00000367740 ANKRD46Q86W74 232 aa12.19□□□□□ -0.46
VAMP4-202ENST00000367740 VRK2Q86Y07 508 aa12.19□□□□□ -0.46
VAMP4-202ENST00000367740 LDLRAD3Q86YD5 345 aa12.19□□□□□ -0.46
VAMP4-202ENST00000367740 MUC20Q8N307 709 aaPredicted RBP12.19□□□□□ -0.46
VAMP4-202ENST00000367740 FITM2Q8N6M3 262 aa12.19□□□□□ -0.46
VAMP4-202ENST00000367740 OR1J2Q8NGS2 313 aa12.19□□□□□ -0.46
VAMP4-202ENST00000367740 NUDT16L1Q9BRJ7 211 aaKnown RBP12.19□□□□□ -0.46
VAMP4-202ENST00000367740 MTHFD2LQ9H903 347 aaPredicted RBP12.19□□□□□ -0.46
VAMP4-202ENST00000367740 CYSLTR2Q9NS75 346 aa12.19□□□□□ -0.46
VAMP4-202ENST00000367740 MARCOQ9UEW3 520 aaPredicted RBP12.19□□□□□ -0.46
VAMP4-202ENST00000367740 XPNPEP2O43895 674 aa12.18□□□□□ -0.46
VAMP4-202ENST00000367740 NPHS1O60500 1241 aa12.18□□□□□ -0.46
VAMP4-202ENST00000367740 WNT5AP41221 380 aa12.18□□□□□ -0.46
VAMP4-202ENST00000367740 CSNK1A1P48729 337 aa12.18□□□□□ -0.46
VAMP4-202ENST00000367740 PCBP3P57721 371 aaKnown RBP12.18□□□□□ -0.46
VAMP4-202ENST00000367740 GNG11P61952 73 aa12.18□□□□□ -0.46
VAMP4-202ENST00000367740 SLC7A5Q01650 507 aa12.18□□□□□ -0.46
VAMP4-202ENST00000367740 MBNL2Q5VZF2 373 aaKnown RBP12.18□□□□□ -0.46
VAMP4-202ENST00000367740 TMEM53Q6P2H8 277 aa12.18□□□□□ -0.46
VAMP4-202ENST00000367740 Q6ZTK2 550 aa12.18□□□□□ -0.46
VAMP4-202ENST00000367740 KLBQ86Z14 1044 aa12.18□□□□□ -0.46
VAMP4-202ENST00000367740 FNDC5Q8NAU1 212 aa12.18□□□□□ -0.46
VAMP4-202ENST00000367740 SLC25A40Q8TBP6 338 aa12.18□□□□□ -0.46
VAMP4-202ENST00000367740 KLF14Q8TD94 323 aaPredicted RBP12.18□□□□□ -0.46
VAMP4-202ENST00000367740 ACMSDQ8TDX5 336 aa12.18□□□□□ -0.46
VAMP4-202ENST00000367740 ITPKCQ96DU7 683 aa12.18□□□□□ -0.46
VAMP4-202ENST00000367740 C3orf30Q96M34 536 aa12.18□□□□□ -0.46
VAMP4-202ENST00000367740 RNF121Q9H920 327 aa12.18□□□□□ -0.46
VAMP4-202ENST00000367740 ACOXLQ9NUZ1 547 aa12.18□□□□□ -0.46
VAMP4-202ENST00000367740 TMEM38BQ9NVV0 291 aa12.18□□□□□ -0.46
VAMP4-202ENST00000367740 CGGBP1Q9UFW8 167 aaPredicted RBP12.18□□□□□ -0.46
VAMP4-202ENST00000367740 EXOC1LA0A1B0GW35 172 aa12.17□□□□□ -0.46
VAMP4-202ENST00000367740 OR2T1O43869 369 aa12.17□□□□□ -0.46
VAMP4-202ENST00000367740 PPP1R3DO95685 299 aa12.17□□□□□ -0.46
VAMP4-202ENST00000367740 PTHP01270 115 aa12.17□□□□□ -0.46
VAMP4-202ENST00000367740 SFTPBP07988 381 aa12.17□□□□□ -0.46
VAMP4-202ENST00000367740 G6PDP11413 515 aa12.17□□□□□ -0.46
VAMP4-202ENST00000367740 NQO1P15559 274 aaKnown RBP12.17□□□□□ -0.46
VAMP4-202ENST00000367740 LIPAP38571 399 aa12.17□□□□□ -0.46
VAMP4-202ENST00000367740 LIN52Q52LA3 116 aa12.17□□□□□ -0.46
VAMP4-202ENST00000367740 TTMPQ5BVD1 217 aa12.17□□□□□ -0.46
VAMP4-202ENST00000367740 ZMAT1Q5H9K5 638 aa12.17□□□□□ -0.46
VAMP4-202ENST00000367740 DHRS7BQ6IAN0 325 aaPredicted RBP12.17□□□□□ -0.46
VAMP4-202ENST00000367740 SERPINA11Q86U17 422 aa12.17□□□□□ -0.46
VAMP4-202ENST00000367740 PEX5LQ8IYB4 626 aa12.17□□□□□ -0.46
VAMP4-202ENST00000367740 C11orf44Q8N8P7 122 aa12.17□□□□□ -0.46
VAMP4-202ENST00000367740 SLC41A3Q96GZ6 507 aa12.17□□□□□ -0.46
VAMP4-202ENST00000367740 SAMD8Q96LT4 415 aa12.17□□□□□ -0.46
VAMP4-202ENST00000367740 SLC35A5Q9BS91 424 aa12.17□□□□□ -0.46
VAMP4-202ENST00000367740 PCGF1Q9BSM1 259 aa12.17□□□□□ -0.46
VAMP4-202ENST00000367740 CDADC1Q9BWV3 514 aa12.17□□□□□ -0.46
VAMP4-202ENST00000367740 OR2J1Q9GZK6 312 aa12.17□□□□□ -0.46
VAMP4-202ENST00000367740 LRMDAQ9H2I8 198 aa12.17□□□□□ -0.46
VAMP4-202ENST00000367740 DCDC2Q9UHG0 476 aa12.17□□□□□ -0.46
VAMP4-202ENST00000367740 CHST2Q9Y4C5 530 aa12.17□□□□□ -0.46
VAMP4-202ENST00000367740 DNAH7Q8WXX0 4024 aa12.16□□□□□ -0.46
VAMP4-202ENST00000367740 IGKV1D-42A0A075B6H8 117 aa12.16□□□□□ -0.46
VAMP4-202ENST00000367740 A0A087WUJ7 227 aa12.16□□□□□ -0.46
VAMP4-202ENST00000367740 A0A087WUV0 522 aaPredicted RBP12.16□□□□□ -0.46
VAMP4-202ENST00000367740 CENPVL3A0A0U1RRI6 287 aa12.16□□□□□ -0.46
VAMP4-202ENST00000367740 IQCMA0A1B0GVH7 501 aa12.16□□□□□ -0.46
VAMP4-202ENST00000367740 ZNF726A6NNF4 738 aa12.16□□□□□ -0.46
VAMP4-202ENST00000367740 CPSF4O95639 269 aaKnown RBP12.16□□□□□ -0.46
VAMP4-202ENST00000367740 CPT2P23786 658 aa12.16□□□□□ -0.46
VAMP4-202ENST00000367740 CRHR1P34998 444 aa12.16□□□□□ -0.46
VAMP4-202ENST00000367740 CHI3L1P36222 383 aaPredicted RBP12.16□□□□□ -0.46
VAMP4-202ENST00000367740 CDK5R2Q13319 367 aa12.16□□□□□ -0.46
VAMP4-202ENST00000367740 MAPK11Q15759 364 aa12.16□□□□□ -0.46
VAMP4-202ENST00000367740 SLC36A2Q495M3 483 aa12.16□□□□□ -0.46
VAMP4-202ENST00000367740 RNF220Q5VTB9 566 aa12.16□□□□□ -0.46
VAMP4-202ENST00000367740 RFPL4BQ6ZWI9 263 aa12.16□□□□□ -0.46
VAMP4-202ENST00000367740 CLIP4Q8N3C7 705 aa12.16□□□□□ -0.46
VAMP4-202ENST00000367740 RBM15BQ8NDT2 890 aaKnown RBP12.16□□□□□ -0.46
VAMP4-202ENST00000367740 OR4K5Q8NGD3 323 aa12.16□□□□□ -0.46
VAMP4-202ENST00000367740 OR8J2Q8NGG1 315 aa12.16□□□□□ -0.46
VAMP4-202ENST00000367740 OR52P1PQ8NH57 321 aa12.16□□□□□ -0.46
VAMP4-202ENST00000367740 GATAD2BQ8WXI9 593 aa12.16□□□□□ -0.46
VAMP4-202ENST00000367740 CFHR4Q92496 578 aa12.16□□□□□ -0.46
VAMP4-202ENST00000367740 SLC38A4Q969I6 547 aa12.16□□□□□ -0.46
VAMP4-202ENST00000367740 TMEM54Q969K7 222 aa12.16□□□□□ -0.46
VAMP4-202ENST00000367740 SLC19A3Q9BZV2 496 aa12.16□□□□□ -0.46
VAMP4-202ENST00000367740 A4GALTQ9NPC4 353 aa12.16□□□□□ -0.46
VAMP4-202ENST00000367740 KLHL14Q9P2G3 628 aa12.16□□□□□ -0.46
VAMP4-202ENST00000367740 PPP1R3CQ9UQK1 317 aa12.16□□□□□ -0.46
VAMP4-202ENST00000367740 ZNF443Q9Y2A4 671 aaPredicted RBP12.16□□□□□ -0.46
VAMP4-202ENST00000367740 TRAV36DV7A0A075B6V5 113 aa12.15□□□□□ -0.46
VAMP4-202ENST00000367740 A0A0U1RQK1 487 aa12.15□□□□□ -0.46
VAMP4-202ENST00000367740 TMEM178BH3BS89 294 aa12.15□□□□□ -0.46
VAMP4-202ENST00000367740 MGRN1O60291 552 aa12.15□□□□□ -0.46
VAMP4-202ENST00000367740 PLIN3O60664 434 aa12.15□□□□□ -0.46
VAMP4-202ENST00000367740 GLRA3O75311 464 aa12.15□□□□□ -0.46
VAMP4-202ENST00000367740 ENTPD5O75356 428 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms