RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 WDR31Q8NA23 367 aa5.98□□□□□ -1.45
H3F3A-201ENST00000366813 RNF138Q8WVD3 245 aa5.98□□□□□ -1.45
H3F3A-201ENST00000366813 EFHD2Q96C19 240 aaPredicted RBP5.98□□□□□ -1.45
H3F3A-201ENST00000366813 LINGO1Q96FE5 620 aa5.98□□□□□ -1.45
H3F3A-201ENST00000366813 TBX15Q96SF7 602 aa5.98□□□□□ -1.45
H3F3A-201ENST00000366813 DOK1Q99704 481 aa5.98□□□□□ -1.45
H3F3A-201ENST00000366813 CENPOQ9BU64 300 aa5.98□□□□□ -1.45
H3F3A-201ENST00000366813 RAD21L1Q9H4I0 556 aa5.98□□□□□ -1.45
H3F3A-201ENST00000366813 ZNF665Q9H7R5 613 aa5.98□□□□□ -1.45
H3F3A-201ENST00000366813 NT5DC2Q9H857 520 aa5.98□□□□□ -1.45
H3F3A-201ENST00000366813 INTS10Q9NVR2 710 aaKnown RBP5.98□□□□□ -1.45
H3F3A-201ENST00000366813 MS4A12Q9NXJ0 267 aa5.98□□□□□ -1.45
H3F3A-201ENST00000366813 PLEK2Q9NYT0 353 aa5.98□□□□□ -1.45
H3F3A-201ENST00000366813 FLRT3Q9NZU0 649 aa5.98□□□□□ -1.45
H3F3A-201ENST00000366813 MRPL15Q9P015 296 aaKnown RBP5.98□□□□□ -1.45
H3F3A-201ENST00000366813 TRMT6Q9UJA5 497 aaKnown RBP5.98□□□□□ -1.45
H3F3A-201ENST00000366813 PLLPQ9Y342 182 aa5.98□□□□□ -1.45
H3F3A-201ENST00000366813 IGHV3-15A0A0B4J1V0 119 aa5.97□□□□□ -1.45
H3F3A-201ENST00000366813 HNRNPCL2B2RXH8 293 aa5.97□□□□□ -1.45
H3F3A-201ENST00000366813 hCG_2039718K7EN88 272 aa5.97□□□□□ -1.45
H3F3A-201ENST00000366813 PGRMC2O15173 223 aa5.97□□□□□ -1.45
H3F3A-201ENST00000366813 TO15178 435 aa5.97□□□□□ -1.45
H3F3A-201ENST00000366813 PPIHO43447 177 aaKnown RBP5.97□□□□□ -1.45
H3F3A-201ENST00000366813 KERAO60938 352 aa5.97□□□□□ -1.45
H3F3A-201ENST00000366813 RSL1D1O76021 490 aaKnown RBP5.97□□□□□ -1.45
H3F3A-201ENST00000366813 NDUFA7O95182 113 aa5.97□□□□□ -1.45
H3F3A-201ENST00000366813 APRTP07741 180 aa5.97□□□□□ -1.45
H3F3A-201ENST00000366813 ADRA2AP08913 450 aa5.97□□□□□ -1.45
H3F3A-201ENST00000366813 HLA-DOBP13765 273 aa5.97□□□□□ -1.45
H3F3A-201ENST00000366813 PPICP45877 212 aa5.97□□□□□ -1.45
H3F3A-201ENST00000366813 RAB10P61026 200 aa5.97□□□□□ -1.45
H3F3A-201ENST00000366813 ARMCX4Q5H9R4 360 aa5.97□□□□□ -1.45
H3F3A-201ENST00000366813 OR4C11Q6IEV9 310 aa5.97□□□□□ -1.45
H3F3A-201ENST00000366813 CAVIN1Q6NZI2 390 aaKnown RBP5.97□□□□□ -1.45
H3F3A-201ENST00000366813 FCRLAQ7L513 359 aa5.97□□□□□ -1.45
H3F3A-201ENST00000366813 PRUNE1Q86TP1 453 aa5.97□□□□□ -1.45
H3F3A-201ENST00000366813 RIBC1Q8N443 379 aaPredicted RBP5.97□□□□□ -1.45
H3F3A-201ENST00000366813 LINC01006Q8NI28 216 aa5.97□□□□□ -1.45
H3F3A-201ENST00000366813 SLC38A5Q8WUX1 472 aa5.97□□□□□ -1.45
H3F3A-201ENST00000366813 PHF21AQ96BD5 680 aa5.97□□□□□ -1.45
H3F3A-201ENST00000366813 DDOQ99489 341 aa5.97□□□□□ -1.45
H3F3A-201ENST00000366813 NDNQ99608 321 aa5.97□□□□□ -1.45
H3F3A-201ENST00000366813 MS4A8Q9BY19 250 aa5.97□□□□□ -1.45
H3F3A-201ENST00000366813 OSBPL8Q9BZF1 889 aa5.97□□□□□ -1.45
H3F3A-201ENST00000366813 OR51B5Q9H339 312 aa5.97□□□□□ -1.45
H3F3A-201ENST00000366813 DDX31Q9H8H2 851 aaKnown RBP5.97□□□□□ -1.45
H3F3A-201ENST00000366813 DYNLRB1Q9NP97 96 aa5.97□□□□□ -1.45
H3F3A-201ENST00000366813 ZNF275Q9NSD4 429 aaPredicted RBP5.97□□□□□ -1.45
H3F3A-201ENST00000366813 LYARQ9NX58 379 aaKnown RBP5.97□□□□□ -1.45
H3F3A-201ENST00000366813 PHF11Q9UIL8 331 aa5.97□□□□□ -1.45
H3F3A-201ENST00000366813 CSMD3Q7Z407 3707 aa5.96□□□□□ -1.45
H3F3A-201ENST00000366813 LYSTQ99698 3801 aa5.96□□□□□ -1.46
H3F3A-201ENST00000366813 IGHV3OR16-10A0A075B7F0 116 aa5.96□□□□□ -1.46
H3F3A-201ENST00000366813 TMEM129A0AVI4 362 aa5.96□□□□□ -1.46
H3F3A-201ENST00000366813 CLGNO14967 610 aa5.96□□□□□ -1.46
H3F3A-201ENST00000366813 ADAM20O43506 726 aa5.96□□□□□ -1.46
H3F3A-201ENST00000366813 TCN1P20061 433 aaPredicted RBP5.96□□□□□ -1.46
H3F3A-201ENST00000366813 IL12BP29460 328 aa5.96□□□□□ -1.46
H3F3A-201ENST00000366813 EVI2BP34910 448 aa5.96□□□□□ -1.46
H3F3A-201ENST00000366813 SFTPDP35247 375 aa5.96□□□□□ -1.46
H3F3A-201ENST00000366813 SLC1A3P43003 542 aa5.96□□□□□ -1.46
H3F3A-201ENST00000366813 XKP51811 444 aa5.96□□□□□ -1.46
H3F3A-201ENST00000366813 ISL1P61371 349 aa5.96□□□□□ -1.46
H3F3A-201ENST00000366813 GABRA6Q16445 453 aa5.96□□□□□ -1.46
H3F3A-201ENST00000366813 PDSS1Q5T2R2 415 aa5.96□□□□□ -1.46
H3F3A-201ENST00000366813 C6orf163Q5TEZ5 329 aa5.96□□□□□ -1.46
H3F3A-201ENST00000366813 RAD9BQ6WBX8 426 aa5.96□□□□□ -1.46
H3F3A-201ENST00000366813 Q75L30 129 aa5.96□□□□□ -1.46
H3F3A-201ENST00000366813 MARCH3Q86UD3 253 aa5.96□□□□□ -1.46
H3F3A-201ENST00000366813 ZNF100Q8IYN0 542 aa5.96□□□□□ -1.46
H3F3A-201ENST00000366813 UBE2J2Q8N2K1 259 aa5.96□□□□□ -1.46
H3F3A-201ENST00000366813 RNF175Q8N4F7 328 aa5.96□□□□□ -1.46
H3F3A-201ENST00000366813 RNF10Q8N5U6 811 aaKnown RBP5.96□□□□□ -1.46
H3F3A-201ENST00000366813 OR52R1Q8NGF1 315 aa5.96□□□□□ -1.46
H3F3A-201ENST00000366813 ZNF473Q8WTR7 871 aaKnown RBP5.96□□□□□ -1.46
H3F3A-201ENST00000366813 YIPF5Q969M3 257 aa5.96□□□□□ -1.46
H3F3A-201ENST00000366813 MUS81Q96NY9 551 aa5.96□□□□□ -1.46
H3F3A-201ENST00000366813 ZNF300Q96RE9 604 aaPredicted RBP5.96□□□□□ -1.46
H3F3A-201ENST00000366813 KIFC1Q9BW19 673 aa5.96□□□□□ -1.46
H3F3A-201ENST00000366813 C1QTNF4Q9BXJ3 329 aa5.96□□□□□ -1.46
H3F3A-201ENST00000366813 CSTL1Q9H114 145 aa5.96□□□□□ -1.46
H3F3A-201ENST00000366813 ANKRA2Q9H9E1 313 aa5.96□□□□□ -1.46
H3F3A-201ENST00000366813 IARS2Q9NSE4 1012 aaKnown RBP5.96□□□□□ -1.46
H3F3A-201ENST00000366813 NKIRAS2Q9NYR9 191 aa5.96□□□□□ -1.46
H3F3A-201ENST00000366813 CFL2Q9Y281 166 aa5.96□□□□□ -1.46
H3F3A-201ENST00000366813 ASB4Q9Y574 426 aa5.96□□□□□ -1.46
H3F3A-201ENST00000366813 LOC100509620A0A075B734 347 aa5.95□□□□□ -1.46
H3F3A-201ENST00000366813 SAA2-SAA4A0A096LPE2 208 aa5.95□□□□□ -1.46
H3F3A-201ENST00000366813 H0YL77 283 aa5.95□□□□□ -1.46
H3F3A-201ENST00000366813 J3QR06 171 aa5.95□□□□□ -1.46
H3F3A-201ENST00000366813 FADS1O60427 444 aa5.95□□□□□ -1.46
H3F3A-201ENST00000366813 TPM3P06753 285 aa5.95□□□□□ -1.46
H3F3A-201ENST00000366813 CPMP14384 443 aa5.95□□□□□ -1.46
H3F3A-201ENST00000366813 ETS1P14921 441 aa5.95□□□□□ -1.46
H3F3A-201ENST00000366813 PIK3R1P27986 724 aa5.95□□□□□ -1.46
H3F3A-201ENST00000366813 KRT20P35900 424 aa5.95□□□□□ -1.46
H3F3A-201ENST00000366813 EMDP50402 254 aa5.95□□□□□ -1.46
H3F3A-201ENST00000366813 TMEM33P57088 247 aa5.95□□□□□ -1.46
H3F3A-201ENST00000366813 LCN2P80188 198 aa5.95□□□□□ -1.46
H3F3A-201ENST00000366813 MYL5Q02045 173 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms