RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 PROKR2Q8NFJ6 384 aa18.27■□□□□ 0.52
SHISA4-201ENST00000362011 TMEM54Q969K7 222 aa18.27■□□□□ 0.52
SHISA4-201ENST00000362011 TSSK2Q96PF2 358 aa18.27■□□□□ 0.52
SHISA4-201ENST00000362011 TEAD3Q99594 435 aa18.27■□□□□ 0.52
SHISA4-201ENST00000362011 TP63Q9H3D4 680 aaPredicted RBP18.27■□□□□ 0.52
SHISA4-201ENST00000362011 RERGLQ9H628 205 aa18.27■□□□□ 0.52
SHISA4-201ENST00000362011 ZNF696Q9H7X3 374 aa18.27■□□□□ 0.52
SHISA4-201ENST00000362011 PSORS1C1Q9UIG5 152 aa18.27■□□□□ 0.52
SHISA4-201ENST00000362011 B9D1Q9UPM9 204 aa18.27■□□□□ 0.52
SHISA4-201ENST00000362011 MAGEA13PA6NCF6 341 aa18.26■□□□□ 0.51
SHISA4-201ENST00000362011 MBD3L4A6NDZ8 208 aaPredicted RBP18.26■□□□□ 0.51
SHISA4-201ENST00000362011 MBD3L3A6NE82 208 aaPredicted RBP18.26■□□□□ 0.51
SHISA4-201ENST00000362011 EFCAB10A6NFE3 127 aa18.26■□□□□ 0.51
SHISA4-201ENST00000362011 MBD3L5A6NJ08 208 aaPredicted RBP18.26■□□□□ 0.51
SHISA4-201ENST00000362011 KHDRBS3O75525 346 aaKnown RBP18.26■□□□□ 0.51
SHISA4-201ENST00000362011 LYNP07948 512 aa18.26■□□□□ 0.51
SHISA4-201ENST00000362011 AGTR1P30556 359 aa18.26■□□□□ 0.51
SHISA4-201ENST00000362011 GSTT1P30711 240 aa18.26■□□□□ 0.51
SHISA4-201ENST00000362011 MTNR1AP48039 350 aa18.26■□□□□ 0.51
SHISA4-201ENST00000362011 FMODQ06828 376 aa18.26■□□□□ 0.51
SHISA4-201ENST00000362011 HIST3H3Q16695 136 aa18.26■□□□□ 0.51
SHISA4-201ENST00000362011 RTL6Q6ICC9 239 aa18.26■□□□□ 0.51
SHISA4-201ENST00000362011 ZBTB46Q86UZ6 589 aa18.26■□□□□ 0.51
SHISA4-201ENST00000362011 C9orf106Q8NAJ2 232 aa18.26■□□□□ 0.51
SHISA4-201ENST00000362011 MBD3L2Q8NHZ7 208 aaPredicted RBP18.26■□□□□ 0.51
SHISA4-201ENST00000362011 IPCEF1Q8WWN9 437 aaPredicted RBP18.26■□□□□ 0.51
SHISA4-201ENST00000362011 GGHQ92820 318 aa18.26■□□□□ 0.51
SHISA4-201ENST00000362011 RNFT2Q96EX2 444 aa18.26■□□□□ 0.51
SHISA4-201ENST00000362011 RACGAP1Q9H0H5 632 aa18.26■□□□□ 0.51
SHISA4-201ENST00000362011 GLTPQ9NZD2 209 aa18.26■□□□□ 0.51
SHISA4-201ENST00000362011 CNOT2Q9NZN8 540 aaKnown RBP18.26■□□□□ 0.51
SHISA4-201ENST00000362011 IGLV1-36A0A0B4J1U3 117 aa18.25■□□□□ 0.51
SHISA4-201ENST00000362011 IRGMA1A4Y4 181 aa18.25■□□□□ 0.51
SHISA4-201ENST00000362011 PTGES3LE9PB15 166 aa18.25■□□□□ 0.51
SHISA4-201ENST00000362011 DCTN6O00399 190 aa18.25■□□□□ 0.51
SHISA4-201ENST00000362011 SLC19A2O60779 497 aa18.25■□□□□ 0.51
SHISA4-201ENST00000362011 CLDN1O95832 211 aa18.25■□□□□ 0.51
SHISA4-201ENST00000362011 PIPP12273 146 aaPredicted RBP18.25■□□□□ 0.51
SHISA4-201ENST00000362011 CTLA4P16410 223 aa18.25■□□□□ 0.51
SHISA4-201ENST00000362011 EEF1B2P24534 225 aaKnown RBP18.25■□□□□ 0.51
SHISA4-201ENST00000362011 NTF4P34130 210 aa18.25■□□□□ 0.51
SHISA4-201ENST00000362011 SLC15A1P46059 708 aa18.25■□□□□ 0.51
SHISA4-201ENST00000362011 DBPQ10586 325 aaPredicted RBP18.25■□□□□ 0.51
SHISA4-201ENST00000362011 KLHL22Q53GT1 634 aa18.25■□□□□ 0.51
SHISA4-201ENST00000362011 AHSA2Q719I0 299 aa18.25■□□□□ 0.51
SHISA4-201ENST00000362011 C20orf196Q8IYI0 205 aa18.25■□□□□ 0.51
SHISA4-201ENST00000362011 GPR137CQ8N3F9 429 aa18.25■□□□□ 0.51
SHISA4-201ENST00000362011 ST6GALNAC3Q8NDV1 305 aa18.25■□□□□ 0.51
SHISA4-201ENST00000362011 OR51L1Q8NGJ5 315 aa18.25■□□□□ 0.51
SHISA4-201ENST00000362011 OR6K6Q8NGW6 343 aa18.25■□□□□ 0.51
SHISA4-201ENST00000362011 KISS1RQ969F8 398 aaPredicted RBP18.25■□□□□ 0.51
SHISA4-201ENST00000362011 NMD3Q96D46 503 aaKnown RBP18.25■□□□□ 0.51
SHISA4-201ENST00000362011 RHNO1Q9BSD3 238 aa18.25■□□□□ 0.51
SHISA4-201ENST00000362011 CCNB1IP1Q9NPC3 277 aa18.25■□□□□ 0.51
SHISA4-201ENST00000362011 B3GAT2Q9NPZ5 323 aa18.25■□□□□ 0.51
SHISA4-201ENST00000362011 MRPS18AQ9NVS2 196 aaKnown RBP18.25■□□□□ 0.51
SHISA4-201ENST00000362011 FKBP14Q9NWM8 211 aa18.25■□□□□ 0.51
SHISA4-201ENST00000362011 FOXD3Q9UJU5 478 aaPredicted RBP18.25■□□□□ 0.51
SHISA4-201ENST00000362011 FAM215AQ9Y5M1 114 aa18.25■□□□□ 0.51
SHISA4-201ENST00000362011 A1L4Q6 167 aa18.24■□□□□ 0.51
SHISA4-201ENST00000362011 FAM171A2A8MVW0 826 aa18.24■□□□□ 0.51
SHISA4-201ENST00000362011 QDPRP09417 244 aa18.24■□□□□ 0.51
SHISA4-201ENST00000362011 CENPAP49450 140 aa18.24■□□□□ 0.51
SHISA4-201ENST00000362011 SLC35A2P78381 396 aa18.24■□□□□ 0.51
SHISA4-201ENST00000362011 GGTLC2Q14390 218 aa18.24■□□□□ 0.51
SHISA4-201ENST00000362011 LINC01590Q5TEZ4 76 aa18.24■□□□□ 0.51
SHISA4-201ENST00000362011 SLC25A47Q6Q0C1 308 aa18.24■□□□□ 0.51
SHISA4-201ENST00000362011 B3GNT6Q6ZMB0 384 aa18.24■□□□□ 0.51
SHISA4-201ENST00000362011 NUFIP2Q7Z417 695 aaKnown RBP18.24■□□□□ 0.51
SHISA4-201ENST00000362011 DOLPP1Q86YN1 238 aa18.24■□□□□ 0.51
SHISA4-201ENST00000362011 ZNRF4Q8WWF5 429 aa18.24■□□□□ 0.51
SHISA4-201ENST00000362011 MYDGFQ969H8 173 aa18.24■□□□□ 0.51
SHISA4-201ENST00000362011 MCHR2Q969V1 340 aa18.24■□□□□ 0.51
SHISA4-201ENST00000362011 ZMYND19Q96E35 227 aaPredicted RBP18.24■□□□□ 0.51
SHISA4-201ENST00000362011 COPS4Q9BT78 406 aa18.24■□□□□ 0.51
SHISA4-201ENST00000362011 ULBP2Q9BZM5 246 aa18.24■□□□□ 0.51
SHISA4-201ENST00000362011 LINC00470Q9BZP3 86 aa18.24■□□□□ 0.51
SHISA4-201ENST00000362011 SLCO5A1Q9H2Y9 848 aa18.24■□□□□ 0.51
SHISA4-201ENST00000362011 DUSP21Q9H596 190 aa18.24■□□□□ 0.51
SHISA4-201ENST00000362011 PAK1IP1Q9NWT1 392 aaPredicted RBP18.24■□□□□ 0.51
SHISA4-201ENST00000362011 HAO2Q9NYQ3 351 aa18.24■□□□□ 0.51
SHISA4-201ENST00000362011 ERRFI1Q9UJM3 462 aaPredicted RBP18.24■□□□□ 0.51
SHISA4-201ENST00000362011 EMC9Q9Y3B6 208 aa18.24■□□□□ 0.51
SHISA4-201ENST00000362011 TRIM64A6NGJ6 449 aa18.23■□□□□ 0.51
SHISA4-201ENST00000362011 OR6C65A6NJZ3 312 aa18.23■□□□□ 0.51
SHISA4-201ENST00000362011 ZNF133P52736 654 aaPredicted RBP18.23■□□□□ 0.51
SHISA4-201ENST00000362011 BLVRAP53004 296 aa18.23■□□□□ 0.51
SHISA4-201ENST00000362011 RAB40BQ12829 278 aa18.23■□□□□ 0.51
SHISA4-201ENST00000362011 POU4F2Q12837 409 aa18.23■□□□□ 0.51
SHISA4-201ENST00000362011 GUSBP1Q15486 140 aa18.23■□□□□ 0.51
SHISA4-201ENST00000362011 ETFDHQ16134 617 aa18.23■□□□□ 0.51
SHISA4-201ENST00000362011 PHYHD1Q5SRE7 291 aa18.23■□□□□ 0.51
SHISA4-201ENST00000362011 ZNF787Q6DD87 383 aa18.23■□□□□ 0.51
SHISA4-201ENST00000362011 B3GLCTQ6Y288 498 aa18.23■□□□□ 0.51
SHISA4-201ENST00000362011 ZNF100Q8IYN0 542 aa18.23■□□□□ 0.51
SHISA4-201ENST00000362011 GCNT2Q8N0V5 402 aa18.23■□□□□ 0.51
SHISA4-201ENST00000362011 STX19Q8N4C7 294 aa18.23■□□□□ 0.51
SHISA4-201ENST00000362011 NSMAFQ92636 917 aa18.23■□□□□ 0.51
SHISA4-201ENST00000362011 APH1AQ96BI3 265 aa18.23■□□□□ 0.51
SHISA4-201ENST00000362011 LGALS12Q96DT0 336 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms