RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 RSPH9Q9H1X1 276 aaPredicted RBP11.58□□□□□ -0.55
VAMP1-201ENST00000361716 CMC2Q9NRP2 79 aa11.58□□□□□ -0.55
VAMP1-201ENST00000361716 PRR13Q9NZ81 148 aa11.58□□□□□ -0.55
VAMP1-201ENST00000361716 CALML5Q9NZT1 146 aa11.58□□□□□ -0.55
VAMP1-201ENST00000361716 CSAG2Q9Y5P2 127 aa11.58□□□□□ -0.55
VAMP1-201ENST00000361716 CTDSPLO15194 276 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 GATCO43716 136 aaKnown RBP11.58□□□□□ -0.56
VAMP1-201ENST00000361716 OR10H2O60403 315 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 SNAPC5O75971 98 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 ADH5P11766 374 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 HIST1H1CP16403 213 aaKnown RBP11.58□□□□□ -0.56
VAMP1-201ENST00000361716 RPS10P46783 165 aaKnown RBP11.58□□□□□ -0.56
VAMP1-201ENST00000361716 VASPP50552 380 aaPredicted RBP11.58□□□□□ -0.56
VAMP1-201ENST00000361716 CASP6P55212 293 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 PCBP4P57723 403 aaKnown RBP11.58□□□□□ -0.56
VAMP1-201ENST00000361716 PPP2CBP62714 309 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 PPP2CAP67775 309 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 GAS6Q14393 721 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 RNF212Q495C1 297 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 STAC2Q6ZMT1 411 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 BPIFB2Q8N4F0 458 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 ZNF383Q8NA42 475 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 RNF141Q8WVD5 230 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 RGCCQ9H4X1 137 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 UNKLQ9H9P5 680 aaKnown RBP11.58□□□□□ -0.56
VAMP1-201ENST00000361716 NCDNQ9UBB6 729 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 SCN8AQ9UQD0 1980 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 NLRC5Q86WI3 1866 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 H7C1C5 153 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 CYB5AP00167 134 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 RAB40ALP0C0E4 278 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 ZNF888P0CJ79 500 aaPredicted RBP11.58□□□□□ -0.56
VAMP1-201ENST00000361716 CPMP14384 443 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 LCN6P62502 163 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 CXADRP78310 365 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 SLC7A9P82251 487 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 DHRS2Q13268 280 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 OR1Q1Q15612 314 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 DUSP5Q16690 384 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 UBE3DQ7Z6J8 389 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 OR7G2Q8NG99 324 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 RAB40AQ8WXH6 277 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 GAL3ST3Q96A11 431 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 TMEM106AQ96A25 262 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 ZNF514Q96K75 400 aaPredicted RBP11.58□□□□□ -0.56
VAMP1-201ENST00000361716 GFI1Q99684 422 aa11.58□□□□□ -0.56
VAMP1-201ENST00000361716 HEATR5BQ9P2D3 2071 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 A0A1W2PP55 124 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 TMEM72A0PK05 275 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 ALOX12BO75342 701 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 OR2F2O95006 317 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 TBX6O95947 436 aaPredicted RBP11.57□□□□□ -0.56
VAMP1-201ENST00000361716 OR2F1Q13607 317 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 ZNF124Q15973 351 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 RPL22L1Q6P5R6 122 aaKnown RBP11.57□□□□□ -0.56
VAMP1-201ENST00000361716 GALNT16Q8N428 558 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 OR10AC1Q8NH08 325 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 SECTM1Q8WVN6 248 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 SLAMF9Q96A28 289 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 FOXRED1Q96CU9 486 aaPredicted RBP11.57□□□□□ -0.56
VAMP1-201ENST00000361716 KXD1Q9BQD3 176 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 LHX9Q9NQ69 397 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 MBNL1Q9NR56 388 aaKnown RBP11.57□□□□□ -0.56
VAMP1-201ENST00000361716 SAGE1Q9NXZ1 904 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 ZNF443Q9Y2A4 671 aaPredicted RBP11.57□□□□□ -0.56
VAMP1-201ENST00000361716 ZNF281Q9Y2X9 895 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 FAM186AA6NE01 2351 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 TRAPPC13A5PLN9 417 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 GPR37O15354 613 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 CCKBRP32239 447 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 POU3F4P49335 361 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 EBPQ15125 230 aaKnown RBP11.57□□□□□ -0.56
VAMP1-201ENST00000361716 UQCC3Q6UW78 93 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 MRGPREQ86SM8 312 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 PPP1R3BQ86XI6 285 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 PLPP7Q8NBV4 271 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 OR5AK2Q8NH90 309 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 POTEKPQ9BYX7 375 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 FAM117AQ9C073 453 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 EIF5A2Q9GZV4 153 aaKnown RBP11.57□□□□□ -0.56
VAMP1-201ENST00000361716 THSD7BQ9C0I4 1608 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 PMS2P1A4D2B8 440 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 BHLHE40O14503 412 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 GLSO94925 669 aaPredicted RBP11.57□□□□□ -0.56
VAMP1-201ENST00000361716 PMP2P02689 132 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 PVRP15151 417 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 GPX4P36969 197 aaPredicted RBP11.57□□□□□ -0.56
VAMP1-201ENST00000361716 EIF2S3P41091 472 aaKnown RBP11.57□□□□□ -0.56
VAMP1-201ENST00000361716 NANOS3P60323 173 aaKnown RBP11.57□□□□□ -0.56
VAMP1-201ENST00000361716 ACTA2P62736 377 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 ACTG2P63267 376 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 PRDX1Q06830 199 aaKnown RBP11.57□□□□□ -0.56
VAMP1-201ENST00000361716 ZNF616Q08AN1 781 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 C2orf27AQ580R0 203 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 TMEM31Q5JXX7 168 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 CDPF1Q6NVV7 123 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 TMEM205Q6UW68 189 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 MISPQ8IVT2 679 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 BAP18Q8IXM2 172 aa11.57□□□□□ -0.56
VAMP1-201ENST00000361716 DND1Q8IYX4 353 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms