RNA–Protein interactions for RNA: ENST00000361655.6

PCDH11X-202, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-202ENST00000361655 LIPCP11150 499 aa4.95□□□□□ -1.62
PCDH11X-202ENST00000361655 MAPK3P27361 379 aaPredicted RBP4.95□□□□□ -1.62
PCDH11X-202ENST00000361655 LAP3P28838 519 aa4.95□□□□□ -1.62
PCDH11X-202ENST00000361655 RANBP1P43487 201 aa4.95□□□□□ -1.62
PCDH11X-202ENST00000361655 PRSS12P56730 875 aa4.95□□□□□ -1.62
PCDH11X-202ENST00000361655 CLDN20P56880 219 aa4.95□□□□□ -1.62
PCDH11X-202ENST00000361655 TUBA1BP68363 451 aa4.95□□□□□ -1.62
PCDH11X-202ENST00000361655 TEKQ02763 1124 aa4.95□□□□□ -1.62
PCDH11X-202ENST00000361655 CBX3Q13185 183 aa4.95□□□□□ -1.62
PCDH11X-202ENST00000361655 IL10RAQ13651 578 aa4.95□□□□□ -1.62
PCDH11X-202ENST00000361655 NKAPLQ5M9Q1 402 aa4.95□□□□□ -1.62
PCDH11X-202ENST00000361655 TUBA1AQ71U36 451 aa4.95□□□□□ -1.62
PCDH11X-202ENST00000361655 BTN2A1Q7KYR7 527 aa4.95□□□□□ -1.62
PCDH11X-202ENST00000361655 OR2V1Q8NHB1 315 aa4.95□□□□□ -1.62
PCDH11X-202ENST00000361655 APOBEC4Q8WW27 367 aaKnown RBP4.95□□□□□ -1.62
PCDH11X-202ENST00000361655 MUL1Q969V5 352 aa4.95□□□□□ -1.62
PCDH11X-202ENST00000361655 RFT1Q96AA3 541 aa4.95□□□□□ -1.62
PCDH11X-202ENST00000361655 FRMD6Q96NE9 622 aa4.95□□□□□ -1.62
PCDH11X-202ENST00000361655 BEX2Q9BXY8 128 aa4.95□□□□□ -1.62
PCDH11X-202ENST00000361655 CHRNA10Q9GZZ6 450 aa4.95□□□□□ -1.62
PCDH11X-202ENST00000361655 BEX1Q9HBH7 125 aa4.95□□□□□ -1.62
PCDH11X-202ENST00000361655 CDH20Q9HBT6 801 aa4.95□□□□□ -1.62
PCDH11X-202ENST00000361655 CHMP1AQ9HD42 196 aaPredicted RBP4.95□□□□□ -1.62
PCDH11X-202ENST00000361655 REV1Q9UBZ9 1251 aa4.95□□□□□ -1.62
PCDH11X-202ENST00000361655 ZNF639Q9UID6 485 aa4.95□□□□□ -1.62
PCDH11X-202ENST00000361655 KLK4Q9Y5K2 254 aa4.95□□□□□ -1.62
PCDH11X-202ENST00000361655 SPG11Q96JI7 2443 aa4.95□□□□□ -1.62
PCDH11X-202ENST00000361655 PLXNA2O75051 1894 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 IGKV3D-11A0A0A0MRZ8 115 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 TRGV8A0A0C4DH27 118 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 LY6G6EA0A0G2JKS1 128 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 A0A1B0GTH9 108 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 FAM230AA0A1W2PPH8 454 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 GPR171O14626 319 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 ZNF208O43345 1280 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 ZNF354AO60765 605 aaPredicted RBP4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 ADAM11O75078 769 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 ITGB2P05107 769 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 SLC2A2P11168 524 aaPredicted RBP4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 CEACAM1P13688 526 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 SLC2A5P22732 501 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 PCSK6P29122 969 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 PSPHP78330 225 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 P2RY14Q15391 338 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 CEBPEQ15744 281 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 SULF2Q8IWU5 870 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 SLC15A4Q8N697 577 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 GPR148Q8TDV2 347 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 SPTSSAQ969W0 71 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 TMEM106AQ96A25 262 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 ZBTB8AQ96BR9 441 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 SLC25A44Q96H78 314 aaPredicted RBP4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 ZNF285Q96NJ3 590 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 OXGR1Q96P68 337 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 UBL7Q96S82 380 aaPredicted RBP4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 NKX3-1Q99801 234 aaPredicted RBP4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 PRSS27Q9BQR3 290 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 TMEM43Q9BTV4 400 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 TMEM138Q9NPI0 162 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 KLHL9Q9P2J3 617 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 ENPP5Q9UJA9 477 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 ICAM5Q9UMF0 924 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 HDGFL3Q9Y3E1 203 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 U3KQA8 63 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 hCG_1807616A0A1W2PRN6 198 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 ZNF587BE7ETH6 402 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 GABRPO00591 440 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 SEMA7AO75326 666 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 EPPINO95925 133 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 TMEM225BP0DP42 221 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 NPR2P20594 1047 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 LCN1P31025 176 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 MAGEB1P43366 347 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 PSMD7P51665 324 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 GP2P55259 537 aaKnown RBP4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 TSPAN5P62079 268 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 IGLV3-21P80748 117 aaPredicted RBP4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 CDK5Q00535 292 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 MLLT11Q13015 90 aaPredicted RBP4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 FXNQ16595 210 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 FAM27D1Q5T7N8 215 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 GLT8D1Q68CQ7 371 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 MZT2BQ6NZ67 158 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 MRPL14Q6P1L8 145 aaKnown RBP4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 TSEN54Q7Z6J9 526 aaKnown RBP4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 ZNF227Q86WZ6 799 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 CCDC71Q8IV32 467 aaPredicted RBP4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 CISD2Q8N5K1 135 aaKnown RBP4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 LSMEM1Q8N8F7 131 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 FAM83FQ8NEG4 500 aaPredicted RBP4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 OR2M3Q8NG83 312 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 OR13F1Q8NGS4 319 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 OR13C9Q8NGT0 318 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 OR8S1Q8NH09 359 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 MFSD8Q8NHS3 518 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 STK35Q8TDR2 534 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 SLC7A6Q92536 515 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 TSPAN32Q96QS1 320 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 SLC30A2Q9BRI3 323 aa4.94□□□□□ -1.62
PCDH11X-202ENST00000361655 RTN4RQ9BZR6 473 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms