RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 REEP5Q00765 189 aa12.37□□□□□ -0.43
CCDC144A-203ENST00000360495 C21orf62-AS1Q17RA5 79 aa12.37□□□□□ -0.43
CCDC144A-203ENST00000360495 DLEU7Q6UYE1 221 aa12.37□□□□□ -0.43
CCDC144A-203ENST00000360495 OR10D4PQ8NGN7 298 aa12.37□□□□□ -0.43
CCDC144A-203ENST00000360495 UBTD2Q8WUN7 234 aa12.37□□□□□ -0.43
CCDC144A-203ENST00000360495 NEURL3Q96EH8 262 aa12.37□□□□□ -0.43
CCDC144A-203ENST00000360495 GABARAPL1Q9H0R8 117 aa12.37□□□□□ -0.43
CCDC144A-203ENST00000360495 IGKV6-21A0A0C4DH24 114 aa12.37□□□□□ -0.43
CCDC144A-203ENST00000360495 TEAD1P28347 426 aa12.37□□□□□ -0.43
CCDC144A-203ENST00000360495 SNRPNP63162 240 aaKnown RBP12.37□□□□□ -0.43
CCDC144A-203ENST00000360495 SLC14A2Q15849 920 aa12.37□□□□□ -0.43
CCDC144A-203ENST00000360495 TAZQ16635 292 aa12.37□□□□□ -0.43
CCDC144A-203ENST00000360495 RTP2Q5QGT7 225 aa12.37□□□□□ -0.43
CCDC144A-203ENST00000360495 COMMD1Q8N668 190 aa12.37□□□□□ -0.43
CCDC144A-203ENST00000360495 SEH1LQ96EE3 360 aa12.37□□□□□ -0.43
CCDC144A-203ENST00000360495 MYOTQ9UBF9 498 aa12.37□□□□□ -0.43
CCDC144A-203ENST00000360495 A0A087WV62 115 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 CTRB1P17538 263 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 RPL12P30050 165 aaKnown RBP12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 HTR5AP47898 357 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 UBE2G2P60604 165 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 KRTDAPP60985 99 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 CTRB2Q6GPI1 263 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 LSMEM1Q8N8F7 131 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 OR4F5Q8NH21 305 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 TSLPQ969D9 159 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 RPUSD4Q96CM3 377 aaKnown RBP12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 DUS3LQ96G46 650 aaKnown RBP12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 OR4F4Q96R69 305 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 GABARAPL3Q9BY60 117 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 FAM234AQ9H0X4 552 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 CLCF1Q9UBD9 225 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 COL1A1P02452 1464 aaPredicted RBP12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 UNCXA6NJT0 531 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 DVL1O14640 695 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 ZNF264O43296 627 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 BCL2L11O43521 198 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 SNAI1O95863 264 aaPredicted RBP12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 RAB5AP20339 215 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 KIR2DL3P43628 341 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 DVL1P1P54792 670 aaPredicted RBP12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 LINC00346Q8IVM7 164 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 OR4N2Q8NGD1 307 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 RXFP4Q8TDU9 374 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 HSD17B6O14756 317 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 CHRM2P08172 466 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 ALOX5APP20292 161 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 HNRNPA2B1P22626 353 aaKnown RBP12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 SLC35D3Q5M8T2 416 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 TTC9BQ8N6N2 239 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 FBXW5Q969U6 566 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 ATF6BQ99941 703 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 PARD6AQ9NPB6 346 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 A0A1B0GWA3 101 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 SUSD5O60279 629 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 CD1EP15812 388 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 CLEC12BQ2HXU8 276 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 ANGPTL5Q86XS5 388 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 L3MBTL4Q8NA19 623 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 UBAC2Q8NBM4 344 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 PRR14Q9BWN1 585 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 ENKD1Q9H0I2 346 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 ACOXLQ9NUZ1 547 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 CT45A6P0DMU7 189 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 CT45A5P0DMU8 189 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 CT45A7P0DMV0 189 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 CT45A8P0DMV1 189 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 CT45A9P0DMV2 189 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 ADRA2CP18825 462 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 PAX6P26367 422 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 SDHAP31040 664 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 RGRP47804 291 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 PRLHRP49683 370 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 MEOX2P50222 304 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 FABP9Q0Z7S8 132 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 MOGAT2Q3SYC2 334 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 CT45A2Q5DJT8 189 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 CT45A1Q5HYN5 189 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 LANCL3Q6ZV70 420 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 OR5AP2Q8NGF4 316 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 OR51A2Q8NGJ7 313 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 CT45A3Q8NHU0 189 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 SLC6A18Q96N87 628 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 OPALINQ96PE5 141 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 RHOFQ9HBH0 211 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 CREBZFQ9NS37 354 aa12.36□□□□□ -0.43
CCDC144A-203ENST00000360495 A0A1W2PPQ1 181 aa12.35□□□□□ -0.43
CCDC144A-203ENST00000360495 GLCEO94923 617 aa12.35□□□□□ -0.43
CCDC144A-203ENST00000360495 OR4E1P0C645 316 aa12.35□□□□□ -0.43
CCDC144A-203ENST00000360495 MPGP29372 298 aa12.35□□□□□ -0.43
CCDC144A-203ENST00000360495 ZNF133P52736 654 aaPredicted RBP12.35□□□□□ -0.43
CCDC144A-203ENST00000360495 UQCC3Q6UW78 93 aa12.35□□□□□ -0.43
CCDC144A-203ENST00000360495 CPXM2Q8N436 756 aa12.35□□□□□ -0.43
CCDC144A-203ENST00000360495 FAM26EQ8N5C1 309 aa12.35□□□□□ -0.43
CCDC144A-203ENST00000360495 TMEM99Q8N816 258 aa12.35□□□□□ -0.43
CCDC144A-203ENST00000360495 AKR1E2Q96JD6 320 aa12.35□□□□□ -0.43
CCDC144A-203ENST00000360495 MED18Q9BUE0 208 aa12.35□□□□□ -0.43
CCDC144A-203ENST00000360495 VAMP8Q9BV40 100 aa12.35□□□□□ -0.43
CCDC144A-203ENST00000360495 HEYLQ9NQ87 328 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms