RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 CBLN3Q6UW01 205 aa16.85■□□□□ 0.29
SNX11-201ENST00000359238 GSG1LQ6UXU4 331 aa16.85■□□□□ 0.29
SNX11-201ENST00000359238 PPP1R3BQ86XI6 285 aa16.85■□□□□ 0.29
SNX11-201ENST00000359238 PIGXQ8TBF5 258 aa16.85■□□□□ 0.29
SNX11-201ENST00000359238 ANKRD19PQ9H560 264 aa16.85■□□□□ 0.29
SNX11-201ENST00000359238 CACYBPQ9HB71 228 aaKnown RBP16.85■□□□□ 0.29
SNX11-201ENST00000359238 TAS2R5Q9NYW4 299 aa16.85■□□□□ 0.29
SNX11-201ENST00000359238 RCE1Q9Y256 329 aa16.85■□□□□ 0.29
SNX11-201ENST00000359238 SLC6A5Q9Y345 797 aa16.85■□□□□ 0.29
SNX11-201ENST00000359238 H7C2Y5 167 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 GMFGO60234 142 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 AQP8O94778 261 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 TBXA2RP21731 343 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 SLC25A25Q6KCM7 469 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 KIRREL2Q6UWL6 708 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 DBX2Q6ZNG2 339 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 NR4A3Q92570 626 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 HINT3Q9NQE9 182 aaKnown RBP16.84■□□□□ 0.29
SNX11-201ENST00000359238 EXOSC3Q9NQT5 275 aaKnown RBP16.84■□□□□ 0.29
SNX11-201ENST00000359238 ZNF69Q9UC07 566 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 A0A0B4J2E0 115 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 A0A1B0GW55 424 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 A0A1B0GX12 115 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 SNRPGP15A8MWD9 76 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 CDX4O14627 284 aaPredicted RBP16.84■□□□□ 0.29
SNX11-201ENST00000359238 CREBL2O60519 120 aaPredicted RBP16.84■□□□□ 0.29
SNX11-201ENST00000359238 IL5P05113 134 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 ZNF883P0CG24 379 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 DUX4L2P0CJ85 424 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 DUX4L3P0CJ86 424 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 DUX4L4P0CJ87 422 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 DUX4L5P0CJ88 424 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 DUX4L6P0CJ89 424 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 DUX4L7P0CJ90 424 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 CCL4P13236 92 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 ATF1P18846 271 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 TMEM255AQ5JRV8 349 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 ZNF626Q68DY1 528 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 MTFR2Q6P444 385 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 CPOQ8IVL8 374 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 GID4Q8IVV7 300 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 OR8K3Q8NH51 312 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 TMEM239Q8WW34 195 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 SAMD8Q96LT4 415 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 SLC19A3Q9BZV2 496 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 NKX6-2Q9C056 277 aaPredicted RBP16.84■□□□□ 0.29
SNX11-201ENST00000359238 ARL6Q9H0F7 186 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 DNTTIP1Q9H147 329 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 GPN1Q9HCN4 374 aaPredicted RBP16.84■□□□□ 0.29
SNX11-201ENST00000359238 MKKSQ9NPJ1 570 aaPredicted RBP16.84■□□□□ 0.29
SNX11-201ENST00000359238 DUX4Q9UBX2 424 aa16.84■□□□□ 0.29
SNX11-201ENST00000359238 ARPC5O15511 151 aa16.83■□□□□ 0.28
SNX11-201ENST00000359238 FLRT2O43155 660 aa16.83■□□□□ 0.28
SNX11-201ENST00000359238 ZNF354AO60765 605 aaPredicted RBP16.83■□□□□ 0.28
SNX11-201ENST00000359238 ZNF28P17035 718 aa16.83■□□□□ 0.28
SNX11-201ENST00000359238 FPR3P25089 353 aa16.83■□□□□ 0.28
SNX11-201ENST00000359238 AP3S2P59780 193 aa16.83■□□□□ 0.28
SNX11-201ENST00000359238 DEFA5Q01523 94 aa16.83■□□□□ 0.28
SNX11-201ENST00000359238 EBPQ15125 230 aaKnown RBP16.83■□□□□ 0.28
SNX11-201ENST00000359238 NKAIN1Q4KMZ8 207 aa16.83■□□□□ 0.28
SNX11-201ENST00000359238 THSD4Q6ZMP0 1018 aa16.83■□□□□ 0.28
SNX11-201ENST00000359238 ZNF620Q6ZNG0 422 aa16.83■□□□□ 0.28
SNX11-201ENST00000359238 ESPNLQ6ZVH7 1005 aa16.83■□□□□ 0.28
SNX11-201ENST00000359238 TMEM99Q8N816 258 aa16.83■□□□□ 0.28
SNX11-201ENST00000359238 ADOQ96SZ5 270 aa16.83■□□□□ 0.28
SNX11-201ENST00000359238 UTP23Q9BRU9 249 aaKnown RBP16.83■□□□□ 0.28
SNX11-201ENST00000359238 NOX3Q9HBY0 568 aa16.83■□□□□ 0.28
SNX11-201ENST00000359238 POLE3Q9NRF9 147 aa16.83■□□□□ 0.28
SNX11-201ENST00000359238 COL27A1Q8IZC6 1860 aaPredicted RBP16.83■□□□□ 0.28
SNX11-201ENST00000359238 TRAV1-2A0A0B4J238 106 aa16.82■□□□□ 0.28
SNX11-201ENST00000359238 GATBO75879 557 aaKnown RBP16.82■□□□□ 0.28
SNX11-201ENST00000359238 APOC1P02654 83 aa16.82■□□□□ 0.28
SNX11-201ENST00000359238 MT-ND5P03915 603 aa16.82■□□□□ 0.28
SNX11-201ENST00000359238 EPXP11678 715 aa16.82■□□□□ 0.28
SNX11-201ENST00000359238 PAICSP22234 425 aaKnown RBP16.82■□□□□ 0.28
SNX11-201ENST00000359238 GALNSP34059 522 aa16.82■□□□□ 0.28
SNX11-201ENST00000359238 CLDN6P56747 220 aa16.82■□□□□ 0.28
SNX11-201ENST00000359238 TAS2R43P59537 309 aa16.82■□□□□ 0.28
SNX11-201ENST00000359238 ELAVL1Q15717 326 aaKnown RBP16.82■□□□□ 0.28
SNX11-201ENST00000359238 ZNF660Q6AZW8 331 aaPredicted RBP16.82■□□□□ 0.28
SNX11-201ENST00000359238 OR13C2Q8NGS9 318 aa16.82■□□□□ 0.28
SNX11-201ENST00000359238 THEM6Q8WUY1 208 aa16.82■□□□□ 0.28
SNX11-201ENST00000359238 PNPLA2Q96AD5 504 aa16.82■□□□□ 0.28
SNX11-201ENST00000359238 CMTM3Q96MX0 182 aa16.82■□□□□ 0.28
SNX11-201ENST00000359238 SLC25A32Q9H2D1 315 aa16.82■□□□□ 0.28
SNX11-201ENST00000359238 MRPL15Q9P015 296 aaKnown RBP16.82■□□□□ 0.28
SNX11-201ENST00000359238 PCDHGA9Q9Y5G4 932 aaKnown RBP16.82■□□□□ 0.28
SNX11-201ENST00000359238 DAPL1A0PJW8 107 aa16.82■□□□□ 0.28
SNX11-201ENST00000359238 PQLC2LA1A4F0 135 aa16.82■□□□□ 0.28
SNX11-201ENST00000359238 E9PI62 339 aa16.82■□□□□ 0.28
SNX11-201ENST00000359238 ACP1P24666 158 aa16.82■□□□□ 0.28
SNX11-201ENST00000359238 CD96P40200 585 aa16.82■□□□□ 0.28
SNX11-201ENST00000359238 ZFP36L1Q07352 338 aaKnown RBP16.82■□□□□ 0.28
SNX11-201ENST00000359238 SLC3A1Q07837 685 aa16.82■□□□□ 0.28
SNX11-201ENST00000359238 ACSM3Q53FZ2 586 aa16.82■□□□□ 0.28
SNX11-201ENST00000359238 ZNF385CQ66K41 422 aaPredicted RBP16.82■□□□□ 0.28
SNX11-201ENST00000359238 WDR89Q96FK6 387 aaPredicted RBP16.82■□□□□ 0.28
SNX11-201ENST00000359238 INPP5EQ9NRR6 644 aa16.82■□□□□ 0.28
SNX11-201ENST00000359238 TRAV27A0A087WT01 109 aa16.81■□□□□ 0.28
SNX11-201ENST00000359238 A0A0B4J203 849 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms