RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 SMIM10L1P0DMW3 83 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 CNR1P21554 472 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 DLSTP36957 453 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 KIR3DL2P43630 455 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 TFF2Q03403 129 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 DHRS2Q13268 280 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 GPR18Q14330 331 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 MEP1BQ16820 701 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 ITPRIPL2Q3MIP1 535 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 ALG10Q5BKT4 473 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 C1QL3Q5VWW1 255 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 C3orf33Q6P1S2 294 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 ANKRD16Q6P6B7 361 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 PM20D2Q8IYS1 436 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 CLEC1AQ8NC01 280 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 PAQR8Q8TEZ7 354 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 PPP1R1CQ8WVI7 109 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 RERGQ96A58 199 aaPredicted RBP9.18□□□□□ -0.94
PTPRA-203ENST00000356147 ANKRD9Q96BM1 317 aaPredicted RBP9.18□□□□□ -0.94
PTPRA-203ENST00000356147 C3orf49Q96BT1 292 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 SMIM10Q96HG1 83 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 CMTM3Q96MX0 182 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 STACQ99469 402 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 MFRPQ9BY79 579 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 NMNAT2Q9BZQ4 307 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 SLC6A15Q9H2J7 730 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 GMEB2Q9UKD1 530 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 SLC17A4Q9Y2C5 497 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 IGKV1D-42A0A075B6H8 117 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 OR6C76A6NM76 312 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 TGFBR3LH3BV60 316 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 H7C2Y5 167 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 TPPPO94811 219 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 WISP1O95388 367 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 APBB3O95704 486 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 PNPP00491 289 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 TACSTD2P09758 323 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 RPA2P15927 270 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 VAMP1P23763 118 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 SKP1P63208 163 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 BTG2P78543 158 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 MANEAQ5SRI9 462 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 ASPHD2Q6ICH7 369 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 RAB12Q6IQ22 244 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 JMJD6Q6NYC1 403 aaPredicted RBP9.18□□□□□ -0.94
PTPRA-203ENST00000356147 ABHD13Q7L211 337 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 LDLRAD3Q86YD5 345 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 SAMD14Q8IZD0 417 aaPredicted RBP9.18□□□□□ -0.94
PTPRA-203ENST00000356147 CMKLR1Q99788 373 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 ACTR10Q9NZ32 417 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 PRR13Q9NZ81 148 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 WDFY3Q8IZQ1 3526 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 A0A087WUJ7 227 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 A0A0A6YYC8 382 aaPredicted RBP9.18□□□□□ -0.94
PTPRA-203ENST00000356147 C13orf42A0A1B0GVH6 325 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 I3L1I5 382 aaPredicted RBP9.18□□□□□ -0.94
PTPRA-203ENST00000356147 NKX2-2O95096 273 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 ABHD16AO95870 558 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 DCNP07585 359 aaKnown RBP9.18□□□□□ -0.94
PTPRA-203ENST00000356147 ADCYAP1P18509 176 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 GJA4P35212 333 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 GRK6P43250 576 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 CAPZA2P47755 286 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 SPOCK1Q08629 439 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 CD226Q15762 336 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 GLYATL3Q5SZD4 288 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 ATPAF1Q5TC12 328 aaPredicted RBP9.18□□□□□ -0.94
PTPRA-203ENST00000356147 OR52W1Q6IF63 320 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 TMEM71Q6P5X7 295 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 HAGHLQ6PII5 290 aaPredicted RBP9.18□□□□□ -0.94
PTPRA-203ENST00000356147 SLC16A9Q7RTY1 509 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 GVQW1Q8N7I0 195 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 ACBD4Q8NC06 268 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 FLVCR1-AS1Q8TAF5 88 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 GPR148Q8TDV2 347 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 ZNF296Q8WUU4 475 aaPredicted RBP9.18□□□□□ -0.94
PTPRA-203ENST00000356147 FAM46BQ96A09 425 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 OR2M4Q96R27 311 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 USB1Q9BQ65 265 aaKnown RBP9.18□□□□□ -0.94
PTPRA-203ENST00000356147 COMMD4Q9H0A8 199 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 ESRP2Q9H6T0 727 aaKnown RBP9.18□□□□□ -0.94
PTPRA-203ENST00000356147 KIR3DX1Q9H7L2 352 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 ELOVL3Q9HB03 270 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 KLF15Q9UIH9 416 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 ETV7Q9Y603 341 aa9.18□□□□□ -0.94
PTPRA-203ENST00000356147 CPED1A4D0V7 1026 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 TMEM200CA6NKL6 621 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 ABCD4O14678 606 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 EIF4E2O60573 245 aaKnown RBP9.17□□□□□ -0.94
PTPRA-203ENST00000356147 LMX1BO60663 402 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 AQP8O94778 261 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 MGMTP16455 207 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 CD34P28906 385 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 MECP2P51608 486 aaKnown RBP9.17□□□□□ -0.94
PTPRA-203ENST00000356147 EIF2B5Q13144 721 aaKnown RBP9.17□□□□□ -0.94
PTPRA-203ENST00000356147 MESTQ5EB52 335 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 PRAMEF17Q5VTA0 474 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 TANGO2Q6ICL3 276 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 LINC00114Q6XXX2 140 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 TMPPEQ6ZT21 453 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms