RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 LMO1P25800 156 aa7□□□□□ -1.29
CCR9-201ENST00000355983 ADH6P28332 368 aa7□□□□□ -1.29
CCR9-201ENST00000355983 SNCAP37840 140 aa7□□□□□ -1.29
CCR9-201ENST00000355983 CRMP1Q14194 572 aa7□□□□□ -1.29
CCR9-201ENST00000355983 USF2Q15853 346 aaPredicted RBP7□□□□□ -1.29
CCR9-201ENST00000355983 ACTBL2Q562R1 376 aa7□□□□□ -1.29
CCR9-201ENST00000355983 C10orf120Q5SQS8 335 aa7□□□□□ -1.29
CCR9-201ENST00000355983 PHF19Q5T6S3 580 aa7□□□□□ -1.29
CCR9-201ENST00000355983 BIVMQ86UB2 503 aa7□□□□□ -1.29
CCR9-201ENST00000355983 TRAPPC5Q8IUR0 188 aa7□□□□□ -1.29
CCR9-201ENST00000355983 LRRC18Q8N456 261 aa7□□□□□ -1.29
CCR9-201ENST00000355983 OR4K15Q8NH41 348 aa7□□□□□ -1.29
CCR9-201ENST00000355983 DCUN1D4Q92564 292 aa7□□□□□ -1.29
CCR9-201ENST00000355983 RCC1LQ96I51 464 aaKnown RBP7□□□□□ -1.29
CCR9-201ENST00000355983 GJD4Q96KN9 370 aaPredicted RBP7□□□□□ -1.29
CCR9-201ENST00000355983 IP6K3Q96PC2 410 aa7□□□□□ -1.29
CCR9-201ENST00000355983 PRRT1Q99946 306 aa7□□□□□ -1.29
CCR9-201ENST00000355983 OPN3Q9H1Y3 402 aaPredicted RBP7□□□□□ -1.29
CCR9-201ENST00000355983 MED20Q9H944 212 aa7□□□□□ -1.29
CCR9-201ENST00000355983 SIDT1Q9NXL6 827 aaKnown RBP7□□□□□ -1.29
CCR9-201ENST00000355983 ADAM29Q9UKF5 820 aa7□□□□□ -1.29
CCR9-201ENST00000355983 DYRK1BQ9Y463 629 aa7□□□□□ -1.29
CCR9-201ENST00000355983 ZFP37Q9Y6Q3 630 aaPredicted RBP7□□□□□ -1.29
CCR9-201ENST00000355983 NUP210LQ5VU65 1888 aa7□□□□□ -1.29
CCR9-201ENST00000355983 TSPAN11A1L157 253 aa7□□□□□ -1.29
CCR9-201ENST00000355983 ZC3H12DA2A288 527 aaKnown RBP7□□□□□ -1.29
CCR9-201ENST00000355983 C9J4A7 227 aa7□□□□□ -1.29
CCR9-201ENST00000355983 CDC42EP2O14613 210 aa7□□□□□ -1.29
CCR9-201ENST00000355983 HOXA2O43364 376 aa7□□□□□ -1.29
CCR9-201ENST00000355983 OR2C1O95371 312 aa7□□□□□ -1.29
CCR9-201ENST00000355983 CLDN7O95471 211 aa7□□□□□ -1.29
CCR9-201ENST00000355983 MMP3P08254 477 aa7□□□□□ -1.29
CCR9-201ENST00000355983 TEAD1P28347 426 aa7□□□□□ -1.29
CCR9-201ENST00000355983 TAS2R31P59538 309 aa7□□□□□ -1.29
CCR9-201ENST00000355983 RHOAP61586 193 aa7□□□□□ -1.29
CCR9-201ENST00000355983 RPS23P62266 143 aaKnown RBP7□□□□□ -1.29
CCR9-201ENST00000355983 DLK1P80370 383 aa7□□□□□ -1.29
CCR9-201ENST00000355983 FAM3AP98173 230 aa7□□□□□ -1.29
CCR9-201ENST00000355983 SLBPQ14493 270 aaKnown RBP eCLIP7□□□□□ -1.29
CCR9-201ENST00000355983 SLC10A1Q14973 349 aa7□□□□□ -1.29
CCR9-201ENST00000355983 NR0B2Q15466 257 aa7□□□□□ -1.29
CCR9-201ENST00000355983 OR7A5Q15622 319 aa7□□□□□ -1.29
CCR9-201ENST00000355983 Q499Y3 187 aa7□□□□□ -1.29
CCR9-201ENST00000355983 NBPF12Q5TAG4 269 aaPredicted RBP7□□□□□ -1.29
CCR9-201ENST00000355983 TMEM268Q5VZI3 342 aa7□□□□□ -1.29
CCR9-201ENST00000355983 SKA2Q8WVK7 121 aaPredicted RBP7□□□□□ -1.29
CCR9-201ENST00000355983 SECTM1Q8WVN6 248 aa7□□□□□ -1.29
CCR9-201ENST00000355983 ISOC2Q96AB3 205 aa7□□□□□ -1.29
CCR9-201ENST00000355983 CNN2Q99439 309 aaKnown RBP7□□□□□ -1.29
CCR9-201ENST00000355983 DDA1Q9BW61 102 aa7□□□□□ -1.29
CCR9-201ENST00000355983 SLC5A7Q9GZV3 580 aa7□□□□□ -1.29
CCR9-201ENST00000355983 SERTAD3Q9UJW9 196 aa7□□□□□ -1.29
CCR9-201ENST00000355983 MMACHCQ9Y4U1 282 aa7□□□□□ -1.29
CCR9-201ENST00000355983 DENND4CQ5VZ89 1909 aa7□□□□□ -1.29
CCR9-201ENST00000355983 TRBV5-7A0A0A0MS05 114 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 A0A1W2PPK0 400 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 CPSF4LA6NMK7 179 aaKnown RBP6.99□□□□□ -1.29
CCR9-201ENST00000355983 CDC40O60508 579 aaKnown RBP eCLIP6.99□□□□□ -1.29
CCR9-201ENST00000355983 HIST1H2BKO60814 126 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 CST4P01036 141 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 TGFB1P01137 390 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 PMP2P02689 132 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 HIST1H2BJP06899 126 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 PET100P0DJ07 73 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 PTHLHP12272 177 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 DAOP14920 347 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 HIST1H2BOP23527 126 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 IL2RGP31785 369 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 GRK4P32298 578 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 HIST1H2BBP33778 126 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 HIST1H2BDP58876 126 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 STXBP1P61764 594 aaKnown RBP6.99□□□□□ -1.29
CCR9-201ENST00000355983 HIST1H2BCP62807 126 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 UBE2V2Q15819 145 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 HIST2H2BEQ16778 126 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 AARDQ4LEZ3 155 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 TP53I3Q53FA7 332 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.99□□□□□ -1.29
CCR9-201ENST00000355983 STPG1Q5TH74 334 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 RNF219Q5W0B1 726 aaPredicted RBP6.99□□□□□ -1.29
CCR9-201ENST00000355983 ZNF385CQ66K41 422 aaPredicted RBP6.99□□□□□ -1.29
CCR9-201ENST00000355983 ZNF585AQ6P3V2 769 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 ARHGAP11AQ6P4F7 1023 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 NXPE4Q6UWF7 544 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 TPRG1Q6ZUI0 275 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 MEX3DQ86XN8 651 aaKnown RBP6.99□□□□□ -1.29
CCR9-201ENST00000355983 TRAM1L1Q8N609 369 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 ZSCAN4Q8NAM6 433 aaPredicted RBP6.99□□□□□ -1.29
CCR9-201ENST00000355983 ZNF417Q8TAU3 575 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 GPR148Q8TDV2 347 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 HIST1H2BHQ93079 126 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 MR1Q95460 341 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 ZNF385AQ96PM9 386 aaKnown RBP6.99□□□□□ -1.29
CCR9-201ENST00000355983 HIST1H2BNQ99877 126 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 HIST1H2BMQ99879 126 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 LGR4Q9BXB1 951 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 OR51V1Q9H2C8 321 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 EPHX3Q9H6B9 360 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 FBXL21Q9UKT6 434 aa6.99□□□□□ -1.29
CCR9-201ENST00000355983 PRG3Q9Y2Y8 225 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms