RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 WDR76Q9H967 626 aa12.12□□□□□ -0.47
HOXA1-202ENST00000355633 ISG20L2Q9H9L3 353 aaKnown RBP12.12□□□□□ -0.47
HOXA1-202ENST00000355633 SPRR3Q9UBC9 169 aa12.12□□□□□ -0.47
HOXA1-202ENST00000355633 COPS3Q9UNS2 423 aa12.12□□□□□ -0.47
HOXA1-202ENST00000355633 ZNF407Q9C0G0 2248 aa12.12□□□□□ -0.47
HOXA1-202ENST00000355633 ZNF716A6NP11 495 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 CENPBD1B2RD01 187 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 K7EM74 188 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 SYNGR4O95473 234 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 IGHG3P01860 377 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 NR2C1P13056 603 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 ACTA2P62736 377 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 ACTG2P63267 376 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 ACSM1Q08AH1 577 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 RASGEF1BQ0VAM2 473 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 SSX1Q16384 188 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 TBR1Q16650 682 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 CHMP1BQ7LBR1 199 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 CDC20BQ86Y33 519 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 RBMXL3Q8N7X1 1067 aaKnown RBP12.11□□□□□ -0.47
HOXA1-202ENST00000355633 ZIC4Q8N9L1 334 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 NSMAFQ92636 917 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 C4orf36Q96KX1 117 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 OR2M2Q96R28 347 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 MNTQ99583 582 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 YIPF3Q9GZM5 350 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 FLVCR1Q9Y5Y0 555 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 ACACAQ13085 2346 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 J3QLW9 94 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 LALBAP00709 142 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 MT-ND5P03915 603 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 CPN1P15169 458 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 CPEP16870 476 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 ZNF19P17023 458 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 GADD45AP24522 165 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 PTGS2P35354 604 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 C3AR1Q16581 482 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 HIST3H3Q16695 136 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 LIPKQ5VXJ0 399 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 DPY19L4Q7Z388 723 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 KLBQ86Z14 1044 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 ABHD3Q8WU67 409 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 SNX33Q8WV41 574 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 UFD1Q92890 307 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 PNPLA2Q96AD5 504 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 WDYHV1Q96HA8 205 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 BCL7BQ9BQE9 202 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 MRPL22Q9NWU5 206 aaKnown RBP12.11□□□□□ -0.47
HOXA1-202ENST00000355633 BABAM2Q9NXR7 383 aa12.11□□□□□ -0.47
HOXA1-202ENST00000355633 MCTS1Q9ULC4 181 aaKnown RBP12.11□□□□□ -0.47
HOXA1-202ENST00000355633 URB1O60287 2271 aaKnown RBP12.11□□□□□ -0.47
HOXA1-202ENST00000355633 DNAJC13O75165 2243 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 PNMA8CA0A1B0GUJ8 204 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 CSNK1A1P48729 337 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 OR12D2P58182 307 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 ADAM8P78325 824 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 BDH1Q02338 343 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 CTF1Q16619 201 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 CDONQ4KMG0 1287 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.1□□□□□ -0.47
HOXA1-202ENST00000355633 ATCAYQ86WG3 371 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 PHC2Q8IXK0 858 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 SYS1Q8N2H4 156 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 SLC26A10Q8NG04 563 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 OR6N1Q8NGY5 312 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 EXTL1Q92935 676 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 MCHR2Q969V1 340 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 ZNF775Q96BV0 537 aaPredicted RBP12.1□□□□□ -0.47
HOXA1-202ENST00000355633 ABHD17AQ96GS6 310 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 PRRG4Q9BZD6 226 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 TRIM36Q9NQ86 728 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 GLTPQ9NZD2 209 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 KLHL9Q9P2J3 617 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 LAMP5Q9UJQ1 280 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 CAMK2AQ9UQM7 478 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 RCE1Q9Y256 329 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 B3GNT3Q9Y2A9 372 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 TMEM14AQ9Y6G1 99 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 CFAP47Q6ZTR5 3102 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 ZNF593O00488 134 aaPredicted RBP12.1□□□□□ -0.47
HOXA1-202ENST00000355633 AIREO43918 545 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 ZNF432O94892 652 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 ATE1O95260 518 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 MPZL1O95297 269 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 QDPRP09417 244 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 SPARCP09486 303 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 ZNF823P16415 610 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 RPS27P42677 84 aaKnown RBP12.1□□□□□ -0.47
HOXA1-202ENST00000355633 CAPZA2P47755 286 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 SELENOPP49908 381 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 LSM3P62310 102 aaKnown RBP12.1□□□□□ -0.47
HOXA1-202ENST00000355633 TPBGQ13641 420 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 MEP1BQ16820 701 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 TIMM50Q3ZCQ8 353 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 TP53I3Q53FA7 332 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 OTPQ5XKR4 325 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 SLC25A47Q6Q0C1 308 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 C19orf48Q6RUI8 117 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 GLB1L2Q8IW92 636 aa12.1□□□□□ -0.47
HOXA1-202ENST00000355633 TMEM123Q8N131 208 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms