RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 PRKNO60260 465 aaPredicted RBP12.13□□□□□ -0.47
SCN8A-202ENST00000355133 NDUFB7P17568 137 aa12.13□□□□□ -0.47
SCN8A-202ENST00000355133 APOBEC1P41238 236 aaKnown RBP12.13□□□□□ -0.47
SCN8A-202ENST00000355133 STEAP1BQ6NZ63 245 aa12.13□□□□□ -0.47
SCN8A-202ENST00000355133 ANGPTL5Q86XS5 388 aa12.13□□□□□ -0.47
SCN8A-202ENST00000355133 FAM213BQ8TBF2 198 aa12.13□□□□□ -0.47
SCN8A-202ENST00000355133 GPR173Q9NS66 373 aa12.13□□□□□ -0.47
SCN8A-202ENST00000355133 TOPAZ1Q8N9V7 1692 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 FGF17O60258 216 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 GPX2P18283 190 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 SRMP19623 302 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 PIGAP37287 484 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 HCCSP53701 268 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 SLC10A1Q14973 349 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 SIAH3Q8IW03 269 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 SUMF1Q8NBK3 374 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 UBE2FQ969M7 185 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 BANF2Q9H503 90 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 LOC100289279A0A1B0GTE1 492 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 S100A7P31151 101 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 LPCAT3Q6P1A2 487 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 ADGRE4PQ86SQ3 457 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 UHRF2Q96PU4 802 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 A0A1B0GVG6 124 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 LINC01565O15544 149 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 DEFA4P12838 97 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 ST6GAL1P15907 406 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 SLC19A1P41440 591 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 NPY4RP50391 375 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 BTG2P78543 158 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 ZNF74Q16587 644 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 SLC35D3Q5M8T2 416 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 ZNF468Q5VIY5 522 aaPredicted RBP12.12□□□□□ -0.47
SCN8A-202ENST00000355133 SAXO2Q658L1 398 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 CD300LGQ6UXG3 332 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 OVCH1Q7RTY7 1134 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 LACC1Q8IV20 430 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 OR1N1Q8NGS0 311 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 RNF170Q96K19 258 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 CHRNA9Q9UGM1 479 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 MUTYHQ9UIF7 546 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 GUSBP08236 651 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 CALCBP10092 127 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 ANXA7P20073 488 aaKnown RBP12.12□□□□□ -0.47
SCN8A-202ENST00000355133 NME2P22392 152 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 CCR6P51684 374 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 ZMAT1Q5H9K5 638 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 TMPRSS7Q7RTY8 843 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 CCDC71Q8IV32 467 aaPredicted RBP12.12□□□□□ -0.47
SCN8A-202ENST00000355133 SEMA6DQ8NFY4 1073 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 PDCD1LG2Q9BQ51 273 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 BARHL1Q9BZE3 327 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 RAB22AQ9UL26 194 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 A0A1W2PNR3 127 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 SLC16A6O15403 523 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 IL3RAP26951 378 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 TSLPQ969D9 159 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 GNB4Q9HAV0 340 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 C19orf53Q9UNZ5 99 aaPredicted RBP12.12□□□□□ -0.47
SCN8A-202ENST00000355133 PRELID3BQ9Y3B1 194 aa12.12□□□□□ -0.47
SCN8A-202ENST00000355133 HMGN4O00479 90 aa12.11□□□□□ -0.47
SCN8A-202ENST00000355133 RAB11AP62491 216 aa12.11□□□□□ -0.47
SCN8A-202ENST00000355133 HSF1Q00613 529 aa12.11□□□□□ -0.47
SCN8A-202ENST00000355133 SLC22A25Q6T423 547 aa12.11□□□□□ -0.47
SCN8A-202ENST00000355133 ST7LQ8TDW4 575 aa12.11□□□□□ -0.47
SCN8A-202ENST00000355133 FCRL1Q96LA6 429 aa12.11□□□□□ -0.47
SCN8A-202ENST00000355133 TRIB1Q96RU8 372 aa12.11□□□□□ -0.47
SCN8A-202ENST00000355133 SDF2Q99470 211 aa12.11□□□□□ -0.47
SCN8A-202ENST00000355133 UFSP2Q9NUQ7 469 aa12.11□□□□□ -0.47
SCN8A-202ENST00000355133 NECAP2Q9NVZ3 263 aa12.11□□□□□ -0.47
SCN8A-202ENST00000355133 A0A0D9SG52 128 aa12.11□□□□□ -0.47
SCN8A-202ENST00000355133 ZNF705GA8MUZ8 300 aaPredicted RBP12.11□□□□□ -0.47
SCN8A-202ENST00000355133 GABARAPH6UMI1 98 aa12.11□□□□□ -0.47
SCN8A-202ENST00000355133 UBL3O95164 117 aa12.11□□□□□ -0.47
SCN8A-202ENST00000355133 GABARAPO95166 117 aa12.11□□□□□ -0.47
SCN8A-202ENST00000355133 OLFM2O95897 454 aa12.11□□□□□ -0.47
SCN8A-202ENST00000355133 PRKACAP17612 351 aa12.11□□□□□ -0.47
SCN8A-202ENST00000355133 HABP2Q14520 560 aaPredicted RBP12.11□□□□□ -0.47
SCN8A-202ENST00000355133 KCNJ8Q15842 424 aa12.11□□□□□ -0.47
SCN8A-202ENST00000355133 ARHGAP11BQ3KRB8 267 aa12.11□□□□□ -0.47
SCN8A-202ENST00000355133 RFPL4BQ6ZWI9 263 aa12.11□□□□□ -0.47
SCN8A-202ENST00000355133 CPEB2Q7Z5Q1 589 aaKnown RBP12.11□□□□□ -0.47
SCN8A-202ENST00000355133 PTRH1Q86Y79 214 aaKnown RBP12.11□□□□□ -0.47
SCN8A-202ENST00000355133 ZFP82Q8N141 532 aa12.11□□□□□ -0.47
SCN8A-202ENST00000355133 SMAP2Q8WU79 429 aaPredicted RBP12.11□□□□□ -0.47
SCN8A-202ENST00000355133 SLC25A43Q8WUT9 341 aaPredicted RBP12.11□□□□□ -0.47
SCN8A-202ENST00000355133 KLK4Q9Y5K2 254 aa12.11□□□□□ -0.47
SCN8A-202ENST00000355133 PUS1Q9Y606 427 aaKnown RBP eCLIP12.11□□□□□ -0.47
SCN8A-202ENST00000355133 ACOT8O14734 319 aa12.11□□□□□ -0.47
SCN8A-202ENST00000355133 LCMT2O60294 686 aaKnown RBP12.11□□□□□ -0.47
SCN8A-202ENST00000355133 SNAPINO95295 136 aa12.11□□□□□ -0.47
SCN8A-202ENST00000355133 HBG1P69891 147 aa12.11□□□□□ -0.47
SCN8A-202ENST00000355133 HBG2P69892 147 aa12.11□□□□□ -0.47
SCN8A-202ENST00000355133 HIST2H3PS2Q5TEC6 136 aa12.11□□□□□ -0.47
SCN8A-202ENST00000355133 PCNPQ8WW12 178 aaKnown RBP12.11□□□□□ -0.47
SCN8A-202ENST00000355133 BOD1Q96IK1 185 aa12.11□□□□□ -0.47
SCN8A-202ENST00000355133 MRGPRX1Q96LB2 322 aa12.11□□□□□ -0.47
SCN8A-202ENST00000355133 LGI1O95970 557 aa12.11□□□□□ -0.47
SCN8A-202ENST00000355133 QDPRP09417 244 aa12.11□□□□□ -0.47
SCN8A-202ENST00000355133 PPT1P50897 306 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms