RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 SLC25A43Q8WUT9 341 aaPredicted RBP12.05□□□□□ -0.48
IFT88-202ENST00000351808 MR1Q95460 341 aa12.05□□□□□ -0.48
IFT88-202ENST00000351808 SUSD3Q96L08 255 aa12.05□□□□□ -0.48
IFT88-202ENST00000351808 CDCA3Q99618 268 aaPredicted RBP12.05□□□□□ -0.48
IFT88-202ENST00000351808 SEPT5Q99719 369 aaPredicted RBP12.05□□□□□ -0.48
IFT88-202ENST00000351808 MRI1Q9BV20 369 aa12.05□□□□□ -0.48
IFT88-202ENST00000351808 KATNBL1Q9H079 304 aa12.05□□□□□ -0.48
IFT88-202ENST00000351808 PARP12Q9H0J9 701 aaKnown RBP12.05□□□□□ -0.48
IFT88-202ENST00000351808 OPN3Q9H1Y3 402 aaPredicted RBP12.05□□□□□ -0.48
IFT88-202ENST00000351808 RHBGQ9H310 441 aa12.05□□□□□ -0.48
IFT88-202ENST00000351808 GLIPR2Q9H4G4 154 aa12.05□□□□□ -0.48
IFT88-202ENST00000351808 ZNF281Q9Y2X9 895 aa12.05□□□□□ -0.48
IFT88-202ENST00000351808 MKRN2OSH3BPM6 223 aa12.05□□□□□ -0.48
IFT88-202ENST00000351808 PPP1R2P9O14990 202 aa12.05□□□□□ -0.48
IFT88-202ENST00000351808 OR1F1O43749 312 aa12.05□□□□□ -0.48
IFT88-202ENST00000351808 OR2C1O95371 312 aa12.05□□□□□ -0.48
IFT88-202ENST00000351808 VNN2O95498 520 aa12.05□□□□□ -0.48
IFT88-202ENST00000351808 WNT11O96014 354 aa12.05□□□□□ -0.48
IFT88-202ENST00000351808 HMGN2P05204 90 aaKnown RBP12.05□□□□□ -0.48
IFT88-202ENST00000351808 RAB4AP20338 218 aa12.05□□□□□ -0.48
IFT88-202ENST00000351808 CEACAM6P40199 344 aa12.05□□□□□ -0.48
IFT88-202ENST00000351808 KHKP50053 298 aa12.05□□□□□ -0.48
IFT88-202ENST00000351808 HSD11B2P80365 405 aa12.05□□□□□ -0.48
IFT88-202ENST00000351808 MESTQ5EB52 335 aa12.05□□□□□ -0.48
IFT88-202ENST00000351808 LDLRAD1Q5T700 205 aa12.05□□□□□ -0.48
IFT88-202ENST00000351808 TMEM205Q6UW68 189 aa12.05□□□□□ -0.48
IFT88-202ENST00000351808 GDPD4Q6W3E5 623 aa12.05□□□□□ -0.48
IFT88-202ENST00000351808 ZNF836Q6ZNA1 936 aa12.05□□□□□ -0.48
IFT88-202ENST00000351808 HIST2H3AQ71DI3 136 aa12.05□□□□□ -0.48
IFT88-202ENST00000351808 HIST3H2BBQ8N257 126 aa12.05□□□□□ -0.48
IFT88-202ENST00000351808 PNLDC1Q8NA58 520 aaKnown RBP12.05□□□□□ -0.48
IFT88-202ENST00000351808 OR10AD1Q8NGE0 317 aa12.05□□□□□ -0.48
IFT88-202ENST00000351808 OR13C2Q8NGS9 318 aa12.05□□□□□ -0.48
IFT88-202ENST00000351808 OR51A7Q8NH64 312 aa12.05□□□□□ -0.48
IFT88-202ENST00000351808 SUSD6Q92537 303 aa12.05□□□□□ -0.48
IFT88-202ENST00000351808 PHYHIPQ92561 330 aa12.05□□□□□ -0.48
IFT88-202ENST00000351808 MVB12AQ96EY5 273 aa12.05□□□□□ -0.48
IFT88-202ENST00000351808 RIMS4Q9H426 269 aaPredicted RBP12.05□□□□□ -0.48
IFT88-202ENST00000351808 LMAN1LQ9HAT1 526 aa12.05□□□□□ -0.48
IFT88-202ENST00000351808 AMDHD2Q9Y303 409 aa12.05□□□□□ -0.48
IFT88-202ENST00000351808 H0YIZ8 118 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 ZBTB25P24278 435 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 ZNF674Q2M3X9 581 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 ANKRD16Q6P6B7 361 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 NPSR1Q6W5P4 371 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 SYS1Q8N2H4 156 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 OR2A12Q8NGT7 310 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 OR4C6Q8NH72 309 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 OR5B2Q96R09 309 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 ADAM2Q99965 735 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 CST11Q9H112 138 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 VSIG4Q9Y279 399 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 CACNA1CQ13936 2221 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 TRAV27A0A087WT01 109 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 OR5H15A6NDH6 313 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 OR5H1A6NKK0 313 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 BNIP3LO60238 219 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 GPRIN2O60269 458 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 GJB5O95377 273 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 PLGP00747 810 aaPredicted RBP12.04□□□□□ -0.48
IFT88-202ENST00000351808 GNG10P50151 68 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 TAS2R19P59542 299 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 ACTA2P62736 377 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 ACTG2P63267 376 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 LYG2Q86SG7 212 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 GKN2Q86XP6 184 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 FAM219AQ8IW50 185 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 C2orf73Q8N5S3 287 aaPredicted RBP12.04□□□□□ -0.48
IFT88-202ENST00000351808 OR1J1Q8NGS3 322 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 OR13C8Q8NGS7 320 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 CD300LFQ8TDQ1 290 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 TMEM159Q96B96 161 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 ZNF775Q96BV0 537 aaPredicted RBP12.04□□□□□ -0.48
IFT88-202ENST00000351808 NDUFAF3Q9BU61 184 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 GPR62Q9BZJ7 368 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 MRPS33Q9Y291 106 aaKnown RBP12.04□□□□□ -0.48
IFT88-202ENST00000351808 A0A0G2JN53 185 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 TSPAN11A1L157 253 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 TVP23AA6NH52 213 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 HIST1H2BKO60814 126 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 HIST1H2BJP06899 126 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 QDPRP09417 244 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 IRF1P10914 325 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 ZNF28P17035 718 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 HLA-GP17693 338 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 HIST1H2BOP23527 126 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 VAMP1P23763 118 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 HIST1H2BBP33778 126 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 CLDN2P57739 230 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 HIST1H2BDP58876 126 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 ZNF280AP59817 542 aaPredicted RBP12.04□□□□□ -0.48
IFT88-202ENST00000351808 RPS23P62266 143 aaKnown RBP12.04□□□□□ -0.48
IFT88-202ENST00000351808 HIST1H2BCP62807 126 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 RAP1AP62834 184 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 SKP1P63208 163 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 IL13RA1P78552 427 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 VGLL4Q14135 290 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 HIST2H2BEQ16778 126 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.04□□□□□ -0.48
IFT88-202ENST00000351808 Q6ZRG5 221 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms