RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 DIO1P49895 249 aa9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 NANOS3P60323 173 aaKnown RBP9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 RAB2AP61019 212 aa9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 AIMP2Q13155 320 aaKnown RBP9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 ATXN7L3Q14CW9 347 aaPredicted RBP9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 TOMM20Q15388 145 aa9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 OR1Q1Q15612 314 aa9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 EXOSC6Q5RKV6 272 aaKnown RBP9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 TMEM205Q6UW68 189 aa9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 ZNF619Q8N2I2 560 aa9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 GALNT16Q8N428 558 aa9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 RNF166Q96A37 237 aaPredicted RBP9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 ZBTB8AQ96BR9 441 aa9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 SMIM8Q96KF7 97 aa9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 OCSTAMPQ9BR26 566 aa9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 ZNF426Q9BUY5 554 aa9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 GGACTQ9BVM4 153 aa9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 LGR4Q9BXB1 951 aa9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 ZNF350Q9GZX5 532 aa9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 CHRDQ9H2X0 955 aa9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 MEPEQ9NQ76 525 aaPredicted RBP9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 SLC17A5Q9NRA2 495 aa9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 HCFC1R1Q9NWW0 138 aa9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 LPAR3Q9UBY5 353 aa9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 PCDHGA1Q9Y5H4 931 aa9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 POMT1Q9Y6A1 747 aa9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 C9orf170A2RU37 121 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 RNASEK-C17orf49H0YIS7 233 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 ZNF208O43345 1280 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 CD5P06127 495 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 GUSBP08236 651 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 NID1P14543 1247 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 CPT2P23786 658 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 AVPR2P30518 371 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 PPICP45877 212 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 RAB5CP51148 216 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 METAP1P53582 386 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 RBM39Q14498 530 aaKnown RBP9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 NR0B2Q15466 257 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 HMGN3Q15651 99 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 SGCAQ16586 387 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 ZNF750Q32MQ0 723 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 SLC35D3Q5M8T2 416 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 ZNF684Q5T5D7 378 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 PRAMEF17Q5VTA0 474 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 YOD1Q5VVQ6 348 aaPredicted RBP9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 MTSS1LQ765P7 747 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 TMED4Q7Z7H5 227 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 LYG2Q86SG7 212 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 ETFBKMTQ8IXQ9 262 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 OR4K17Q8NGC6 315 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 OR52E2Q8NGJ4 325 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 DVL3Q92997 716 aaPredicted RBP9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 INSM2Q96T92 566 aaPredicted RBP9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 STACQ99469 402 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 SDF2Q99470 211 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 WDR77Q9BQA1 342 aaPredicted RBP9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 ZNF559Q9BR84 538 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 CYTL1Q9NRR1 136 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 DUSP22Q9NRW4 184 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 CHRNA9Q9UGM1 479 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 ZNF107Q9UII5 783 aaPredicted RBP9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 TIMM10BQ9Y5J6 103 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 NUMA1Q14980 2115 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 TRAV18A0A075B6X5 111 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 A0A087WV62 115 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 CPED1A4D0V7 1026 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 C4orf51C9J302 202 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 CCSO14618 274 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 GPR37O15354 613 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 P2RX6O15547 441 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 DNAJB6O75190 326 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 IL2RAP01589 272 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 HNRNPA1P09651 372 aaKnown RBP eCLIP9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 ZNF735P0CB33 412 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 C8orf89P0DMQ9 161 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 LAMP2P13473 410 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 PGAM2P15259 253 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 ZBTB25P24278 435 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 SLC6A9P48067 706 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 PON3Q15166 354 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 MLF2Q15773 248 aaPredicted RBP9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 KLHL26Q53HC5 615 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 C9orf152Q5JTZ5 239 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 OR52W1Q6IF63 320 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 SLC29A4Q7RTT9 530 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 SLC16A11Q8NCK7 471 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 OR2L3Q8NG85 312 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 OR10R2Q8NGX6 335 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 OR8S1Q8NH09 359 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 OR51A7Q8NH64 312 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 NT5CQ8TCD5 201 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 CDS1Q92903 461 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 ARMC5Q96C12 935 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 FBXO17Q96EF6 278 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 CPNE2Q96FN4 548 aaPredicted RBP9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 SEC22AQ96IW7 307 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 MESP1Q9BRJ9 268 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 LAT2Q9GZY6 243 aa9.37□□□□□ -0.91
CHRNA1-202ENST00000348749 TSPAN10Q9H1Z9 355 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms