RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 SDR9C7Q8NEX9 313 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 OR8K3Q8NH51 312 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 OR5AK2Q8NH90 309 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 RGP1Q92546 391 aaPredicted RBP14.42□□□□□ -0.1
HMGA1-202ENST00000347617 SMAD5Q99717 465 aaKnown RBP14.42□□□□□ -0.1
HMGA1-202ENST00000347617 FANCFQ9NPI8 374 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 MOKQ9UQ07 419 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 TRBV5-7A0A0A0MS05 114 aa14.41□□□□□ -0.1
HMGA1-202ENST00000347617 SCAMP1O15126 338 aa14.41□□□□□ -0.1
HMGA1-202ENST00000347617 FGF16O43320 207 aa14.41□□□□□ -0.1
HMGA1-202ENST00000347617 ZFPL1O95159 310 aa14.41□□□□□ -0.1
HMGA1-202ENST00000347617 OR4E1P0C645 316 aa14.41□□□□□ -0.1
HMGA1-202ENST00000347617 HIST1H1CP16403 213 aaKnown RBP14.41□□□□□ -0.1
HMGA1-202ENST00000347617 HCCSP53701 268 aa14.41□□□□□ -0.1
HMGA1-202ENST00000347617 OC90Q02509 493 aaPredicted RBP14.41□□□□□ -0.1
HMGA1-202ENST00000347617 FHL1Q13642 323 aa14.41□□□□□ -0.1
HMGA1-202ENST00000347617 PRRT3Q5FWE3 981 aa14.41□□□□□ -0.1
HMGA1-202ENST00000347617 ELP2Q6IA86 826 aa14.41□□□□□ -0.1
HMGA1-202ENST00000347617 C11orf87Q6NUJ2 197 aa14.41□□□□□ -0.1
HMGA1-202ENST00000347617 STEAP1BQ6NZ63 245 aa14.41□□□□□ -0.1
HMGA1-202ENST00000347617 TMPRSS12Q86WS5 348 aa14.41□□□□□ -0.1
HMGA1-202ENST00000347617 ARL14Q8N4G2 192 aa14.41□□□□□ -0.1
HMGA1-202ENST00000347617 COX18Q8N8Q8 333 aa14.41□□□□□ -0.1
HMGA1-202ENST00000347617 DMBX1Q8NFW5 382 aa14.41□□□□□ -0.1
HMGA1-202ENST00000347617 OR4D10Q8NGI6 311 aa14.41□□□□□ -0.1
HMGA1-202ENST00000347617 OR51S1Q8NGJ8 323 aa14.41□□□□□ -0.1
HMGA1-202ENST00000347617 OR4K13Q8NH42 304 aa14.41□□□□□ -0.1
HMGA1-202ENST00000347617 NT5CQ8TCD5 201 aa14.41□□□□□ -0.1
HMGA1-202ENST00000347617 FOXQ1Q9C009 403 aa14.41□□□□□ -0.1
HMGA1-202ENST00000347617 TMEM185BQ9H7F4 350 aa14.41□□□□□ -0.1
HMGA1-202ENST00000347617 APOBEC3BQ9UH17 382 aaKnown RBP14.41□□□□□ -0.1
HMGA1-202ENST00000347617 A0A1B0GWA3 101 aa14.4□□□□□ -0.1
HMGA1-202ENST00000347617 A0A1W2PS29 197 aa14.4□□□□□ -0.1
HMGA1-202ENST00000347617 TMEM82A0PJX8 343 aa14.4□□□□□ -0.1
HMGA1-202ENST00000347617 OR5H14A6NHG9 310 aa14.4□□□□□ -0.1
HMGA1-202ENST00000347617 P2RX6O15547 441 aa14.4□□□□□ -0.1
HMGA1-202ENST00000347617 SPI1P17947 270 aa14.4□□□□□ -0.1
HMGA1-202ENST00000347617 PTNP21246 168 aa14.4□□□□□ -0.1
HMGA1-202ENST00000347617 CSRP1P21291 193 aaKnown RBP14.4□□□□□ -0.1
HMGA1-202ENST00000347617 CD38P28907 300 aa14.4□□□□□ -0.1
HMGA1-202ENST00000347617 GPR143P51810 404 aa14.4□□□□□ -0.1
HMGA1-202ENST00000347617 SLC25A1P53007 311 aa14.4□□□□□ -0.1
HMGA1-202ENST00000347617 CLDN12P56749 244 aa14.4□□□□□ -0.1
HMGA1-202ENST00000347617 GPR18Q14330 331 aa14.4□□□□□ -0.1
HMGA1-202ENST00000347617 LY6G6FQ5SQ64 297 aa14.4□□□□□ -0.1
HMGA1-202ENST00000347617 MANEAQ5SRI9 462 aa14.4□□□□□ -0.1
HMGA1-202ENST00000347617 ZNF813Q6ZN06 617 aa14.4□□□□□ -0.1
HMGA1-202ENST00000347617 SLC16A9Q7RTY1 509 aa14.4□□□□□ -0.1
HMGA1-202ENST00000347617 TAF8Q7Z7C8 310 aa14.4□□□□□ -0.1
HMGA1-202ENST00000347617 C7orf57Q8NEG2 295 aa14.4□□□□□ -0.1
HMGA1-202ENST00000347617 STEAP2Q8NFT2 490 aa14.4□□□□□ -0.1
HMGA1-202ENST00000347617 RLN3Q8WXF3 142 aa14.4□□□□□ -0.1
HMGA1-202ENST00000347617 ARL11Q969Q4 196 aa14.4□□□□□ -0.1
HMGA1-202ENST00000347617 TM4SF19Q96DZ7 209 aa14.4□□□□□ -0.1
HMGA1-202ENST00000347617 TPSD1Q9BZJ3 242 aa14.4□□□□□ -0.1
HMGA1-202ENST00000347617 FAM117AQ9C073 453 aa14.4□□□□□ -0.1
HMGA1-202ENST00000347617 UCK1Q9HA47 277 aa14.4□□□□□ -0.1
HMGA1-202ENST00000347617 MKKSQ9NPJ1 570 aaPredicted RBP14.4□□□□□ -0.1
HMGA1-202ENST00000347617 RXFP3Q9NSD7 469 aa14.4□□□□□ -0.1
HMGA1-202ENST00000347617 ZFP57Q9NU63 452 aa14.4□□□□□ -0.1
HMGA1-202ENST00000347617 ZNF629Q9UEG4 869 aaPredicted RBP14.4□□□□□ -0.1
HMGA1-202ENST00000347617 UNC80Q8N2C7 3258 aa14.4□□□□□ -0.1
HMGA1-202ENST00000347617 C2orf74A8MZ97 194 aa14.39□□□□□ -0.11
HMGA1-202ENST00000347617 S100A8P05109 93 aa14.39□□□□□ -0.11
HMGA1-202ENST00000347617 ACHEP22303 614 aa14.39□□□□□ -0.11
HMGA1-202ENST00000347617 ELOCQ15369 112 aa14.39□□□□□ -0.11
HMGA1-202ENST00000347617 ZNF528Q3MIS6 628 aa14.39□□□□□ -0.11
HMGA1-202ENST00000347617 AVPI1Q5T686 147 aa14.39□□□□□ -0.11
HMGA1-202ENST00000347617 FHL5Q5TD97 284 aa14.39□□□□□ -0.11
HMGA1-202ENST00000347617 TMEM205Q6UW68 189 aa14.39□□□□□ -0.11
HMGA1-202ENST00000347617 LINC00114Q6XXX2 140 aa14.39□□□□□ -0.11
HMGA1-202ENST00000347617 Q7L0L9 218 aa14.39□□□□□ -0.11
HMGA1-202ENST00000347617 FAM122BQ7Z309 247 aa14.39□□□□□ -0.11
HMGA1-202ENST00000347617 LDLRAD3Q86YD5 345 aa14.39□□□□□ -0.11
HMGA1-202ENST00000347617 PUSL1Q8N0Z8 303 aaKnown RBP14.39□□□□□ -0.11
HMGA1-202ENST00000347617 CLEC1AQ8NC01 280 aa14.39□□□□□ -0.11
HMGA1-202ENST00000347617 NPEPL1Q8NDH3 523 aa14.39□□□□□ -0.11
HMGA1-202ENST00000347617 STOML3Q8TAV4 291 aa14.39□□□□□ -0.11
HMGA1-202ENST00000347617 GPR148Q8TDV2 347 aa14.39□□□□□ -0.11
HMGA1-202ENST00000347617 GPX8Q8TED1 209 aa14.39□□□□□ -0.11
HMGA1-202ENST00000347617 CCDC74AQ96AQ1 378 aa14.39□□□□□ -0.11
HMGA1-202ENST00000347617 CCNL2Q96S94 520 aaPredicted RBP14.39□□□□□ -0.11
HMGA1-202ENST00000347617 SERINC2Q96SA4 455 aa14.39□□□□□ -0.11
HMGA1-202ENST00000347617 VRK1Q99986 396 aaPredicted RBP14.39□□□□□ -0.11
HMGA1-202ENST00000347617 ZNF471Q9BX82 626 aaPredicted RBP14.39□□□□□ -0.11
HMGA1-202ENST00000347617 TTTY10Q9BZA0 68 aa14.39□□□□□ -0.11
HMGA1-202ENST00000347617 COMMD4Q9H0A8 199 aa14.39□□□□□ -0.11
HMGA1-202ENST00000347617 IER3IP1Q9Y5U9 82 aa14.39□□□□□ -0.11
HMGA1-202ENST00000347617 CENPVL1A0A0U1RR11 272 aa14.39□□□□□ -0.11
HMGA1-202ENST00000347617 RNF222A6NCQ9 220 aa14.39□□□□□ -0.11
HMGA1-202ENST00000347617 OR6C74A6NCV1 312 aa14.39□□□□□ -0.11
HMGA1-202ENST00000347617 TMEM212A6NML5 194 aa14.39□□□□□ -0.11
HMGA1-202ENST00000347617 MAGEB4O15481 346 aaPredicted RBP14.39□□□□□ -0.11
HMGA1-202ENST00000347617 BRINP1O60477 761 aa14.39□□□□□ -0.11
HMGA1-202ENST00000347617 CTAG2O75638 210 aa14.39□□□□□ -0.11
HMGA1-202ENST00000347617 CPMP14384 443 aa14.39□□□□□ -0.11
HMGA1-202ENST00000347617 NME1P15531 152 aaKnown RBP14.39□□□□□ -0.11
HMGA1-202ENST00000347617 ADRA2CP18825 462 aa14.39□□□□□ -0.11
HMGA1-202ENST00000347617 LUMP51884 338 aaPredicted RBP14.39□□□□□ -0.11
HMGA1-202ENST00000347617 NANOS3P60323 173 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms