RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 IL22RA1Q8N6P7 574 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 FAM173AQ9BQD7 235 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 ARRDC5A6NEK1 342 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 EMC4Q5J8M3 183 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 OR13C9Q8NGT0 318 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 OR5K2Q8NHB8 316 aa17.93■□□□□ 0.46
HDAC4-201ENST00000345617 CCNL2Q96S94 520 aaPredicted RBP17.93■□□□□ 0.46
HDAC4-201ENST00000345617 BPIFCQ8NFQ6 507 aa17.92■□□□□ 0.46
HDAC4-201ENST00000345617 GPR55Q9Y2T6 319 aaPredicted RBP17.92■□□□□ 0.46
HDAC4-201ENST00000345617 LRP6O75581 1613 aa17.92■□□□□ 0.46
HDAC4-201ENST00000345617 SLC24A4Q8NFF2 622 aa17.92■□□□□ 0.46
HDAC4-201ENST00000345617 ASB11Q8WXH4 323 aa17.92■□□□□ 0.46
HDAC4-201ENST00000345617 IGSF21Q96ID5 467 aa17.92■□□□□ 0.46
HDAC4-201ENST00000345617 GYPBP06028 91 aa17.92■□□□□ 0.46
HDAC4-201ENST00000345617 DAPP51397 102 aa17.92■□□□□ 0.46
HDAC4-201ENST00000345617 DOC2BQ14184 412 aa17.92■□□□□ 0.46
HDAC4-201ENST00000345617 MOGAT2Q3SYC2 334 aa17.92■□□□□ 0.46
HDAC4-201ENST00000345617 OR4F5Q8NH21 305 aa17.92■□□□□ 0.46
HDAC4-201ENST00000345617 OR4F4Q96R69 305 aa17.92■□□□□ 0.46
HDAC4-201ENST00000345617 FAM166BA8MTA8 275 aa17.92■□□□□ 0.46
HDAC4-201ENST00000345617 I6L893 689 aaPredicted RBP17.92■□□□□ 0.46
HDAC4-201ENST00000345617 ZNF593O00488 134 aaPredicted RBP17.92■□□□□ 0.46
HDAC4-201ENST00000345617 ADAM5Q6NVV9 412 aa17.92■□□□□ 0.46
HDAC4-201ENST00000345617 RNF39Q9H2S5 420 aa17.92■□□□□ 0.46
HDAC4-201ENST00000345617 C5AR2Q9P296 337 aa17.92■□□□□ 0.46
HDAC4-201ENST00000345617 PSMB6P28072 239 aa17.92■□□□□ 0.46
HDAC4-201ENST00000345617 ALKBH1Q13686 389 aaKnown RBP17.92■□□□□ 0.46
HDAC4-201ENST00000345617 EIF1BO60739 113 aaKnown RBP17.92■□□□□ 0.46
HDAC4-201ENST00000345617 BLVRBP30043 206 aaPredicted RBP17.92■□□□□ 0.46
HDAC4-201ENST00000345617 TESK1Q15569 626 aa17.92■□□□□ 0.46
HDAC4-201ENST00000345617 UBQLN3Q9H347 655 aa17.92■□□□□ 0.46
HDAC4-201ENST00000345617 A0A1W2PQU0 124 aa17.92■□□□□ 0.46
HDAC4-201ENST00000345617 FAM183AA6NL82 134 aa17.92■□□□□ 0.46
HDAC4-201ENST00000345617 ZNF724A8MTY0 619 aa17.92■□□□□ 0.46
HDAC4-201ENST00000345617 H2BFWTQ7Z2G1 175 aa17.92■□□□□ 0.46
HDAC4-201ENST00000345617 EMC9Q9Y3B6 208 aa17.92■□□□□ 0.46
HDAC4-201ENST00000345617 GP2P55259 537 aaKnown RBP17.91■□□□□ 0.46
HDAC4-201ENST00000345617 SEH1LQ96EE3 360 aa17.91■□□□□ 0.46
HDAC4-201ENST00000345617 NECTIN4Q96NY8 510 aa17.91■□□□□ 0.46
HDAC4-201ENST00000345617 DDOQ99489 341 aa17.91■□□□□ 0.46
HDAC4-201ENST00000345617 HLA-FP30511 346 aa17.91■□□□□ 0.46
HDAC4-201ENST00000345617 C17orf107Q6ZR85 190 aa17.91■□□□□ 0.46
HDAC4-201ENST00000345617 GABARAPL1Q9H0R8 117 aa17.91■□□□□ 0.46
HDAC4-201ENST00000345617 ENPP1P22413 925 aa17.91■□□□□ 0.46
HDAC4-201ENST00000345617 AOAHP28039 575 aa17.91■□□□□ 0.46
HDAC4-201ENST00000345617 FAM189BP81408 668 aa17.91■□□□□ 0.46
HDAC4-201ENST00000345617 FCGR2AP12318 317 aa17.91■□□□□ 0.46
HDAC4-201ENST00000345617 ZNF26P17031 533 aaPredicted RBP17.91■□□□□ 0.46
HDAC4-201ENST00000345617 CCKARP32238 428 aa17.91■□□□□ 0.46
HDAC4-201ENST00000345617 GABRA4P48169 554 aa17.91■□□□□ 0.46
HDAC4-201ENST00000345617 SPNS1Q9H2V7 528 aa17.91■□□□□ 0.46
HDAC4-201ENST00000345617 EMCNQ9ULC0 261 aa17.91■□□□□ 0.46
HDAC4-201ENST00000345617 CAMTA1Q9Y6Y1 1673 aa17.91■□□□□ 0.46
HDAC4-201ENST00000345617 XCR1P46094 333 aa17.91■□□□□ 0.46
HDAC4-201ENST00000345617 CTU2Q2VPK5 515 aaKnown RBP17.91■□□□□ 0.46
HDAC4-201ENST00000345617 ZNF680Q8NEM1 530 aa17.91■□□□□ 0.46
HDAC4-201ENST00000345617 ACTR3CQ9C0K3 210 aaPredicted RBP17.91■□□□□ 0.46
HDAC4-201ENST00000345617 PLK3Q9H4B4 646 aa17.91■□□□□ 0.46
HDAC4-201ENST00000345617 FKRPQ9H9S5 495 aa17.91■□□□□ 0.46
HDAC4-201ENST00000345617 GOLT1BQ9Y3E0 138 aa17.91■□□□□ 0.46
HDAC4-201ENST00000345617 SNX11Q9Y5W9 270 aa17.91■□□□□ 0.46
HDAC4-201ENST00000345617 HEATR5AQ86XA9 2040 aa17.91■□□□□ 0.46
HDAC4-201ENST00000345617 HIST1H3AP68431 136 aa17.91■□□□□ 0.46
HDAC4-201ENST00000345617 TFAP2EQ6VUC0 442 aa17.91■□□□□ 0.46
HDAC4-201ENST00000345617 NLRC3Q7RTR2 1065 aa17.91■□□□□ 0.46
HDAC4-201ENST00000345617 NAXDQ8IW45 347 aa17.91■□□□□ 0.46
HDAC4-201ENST00000345617 PTBP3O95758 552 aaKnown RBP17.91■□□□□ 0.46
HDAC4-201ENST00000345617 TM4SF1P30408 202 aa17.91■□□□□ 0.46
HDAC4-201ENST00000345617 CD68P34810 354 aaPredicted RBP17.91■□□□□ 0.46
HDAC4-201ENST00000345617 NXF5Q9H1B4 397 aaKnown RBP17.91■□□□□ 0.46
HDAC4-201ENST00000345617 ATRXP46100 2492 aa17.9■□□□□ 0.46
HDAC4-201ENST00000345617 KLF8O95600 359 aaPredicted RBP17.9■□□□□ 0.46
HDAC4-201ENST00000345617 TPPP3Q9BW30 176 aa17.9■□□□□ 0.46
HDAC4-201ENST00000345617 CA12O43570 354 aa17.9■□□□□ 0.46
HDAC4-201ENST00000345617 CDC20BQ86Y33 519 aa17.9■□□□□ 0.46
HDAC4-201ENST00000345617 TMEM151BQ8IW70 566 aa17.9■□□□□ 0.46
HDAC4-201ENST00000345617 OSGIN2Q9Y236 505 aa17.9■□□□□ 0.46
HDAC4-201ENST00000345617 B3GALT5Q9Y2C3 310 aa17.9■□□□□ 0.46
HDAC4-201ENST00000345617 SLC35A2P78381 396 aa17.9■□□□□ 0.46
HDAC4-201ENST00000345617 ZNF90Q03938 601 aa17.9■□□□□ 0.46
HDAC4-201ENST00000345617 PKDCCQ504Y2 493 aa17.9■□□□□ 0.46
HDAC4-201ENST00000345617 ANKRD16Q6P6B7 361 aa17.9■□□□□ 0.46
HDAC4-201ENST00000345617 WDTC1Q8N5D0 677 aa17.9■□□□□ 0.46
HDAC4-201ENST00000345617 CPPED1Q9BRF8 314 aaPredicted RBP17.9■□□□□ 0.46
HDAC4-201ENST00000345617 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.9■□□□□ 0.46
HDAC4-201ENST00000345617 PRICKLE3O43900 615 aaPredicted RBP17.9■□□□□ 0.46
HDAC4-201ENST00000345617 FGF7P21781 194 aa17.9■□□□□ 0.46
HDAC4-201ENST00000345617 FOXA1P55317 472 aa17.9■□□□□ 0.46
HDAC4-201ENST00000345617 TVP23CQ96ET8 276 aa17.9■□□□□ 0.46
HDAC4-201ENST00000345617 M0R143 59 aa17.9■□□□□ 0.46
HDAC4-201ENST00000345617 RTL8BQ17RB0 113 aa17.9■□□□□ 0.46
HDAC4-201ENST00000345617 DGAT2L6Q6ZPD8 337 aa17.9■□□□□ 0.46
HDAC4-201ENST00000345617 TMEM102Q8N9M5 508 aaPredicted RBP17.9■□□□□ 0.46
HDAC4-201ENST00000345617 C2CD4CQ8TF44 421 aa17.9■□□□□ 0.46
HDAC4-201ENST00000345617 DUSP23Q9BVJ7 150 aa17.9■□□□□ 0.46
HDAC4-201ENST00000345617 MED9Q9NWA0 146 aa17.9■□□□□ 0.46
HDAC4-201ENST00000345617 PRAMEF4O60810 478 aa17.9■□□□□ 0.46
HDAC4-201ENST00000345617 OR13C7P0DN81 318 aa17.9■□□□□ 0.46
HDAC4-201ENST00000345617 OR1D4P47884 311 aa17.9■□□□□ 0.46
HDAC4-201ENST00000345617 SLC2A8Q9NY64 477 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms