RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 COMMD4Q9H0A8 199 aa17.45■□□□□ 0.38
COL9A3-201ENST00000343916 MRPL22Q9NWU5 206 aaKnown RBP17.45■□□□□ 0.38
COL9A3-201ENST00000343916 STMN3Q9NZ72 180 aa17.45■□□□□ 0.38
COL9A3-201ENST00000343916 ZNF222Q9UK12 451 aa17.45■□□□□ 0.38
COL9A3-201ENST00000343916 TMEM14AQ9Y6G1 99 aa17.45■□□□□ 0.38
COL9A3-201ENST00000343916 ADAMTS20P59510 1910 aa17.45■□□□□ 0.38
COL9A3-201ENST00000343916 A0A1W2PPC1 479 aa17.44■□□□□ 0.38
COL9A3-201ENST00000343916 WNT11O96014 354 aa17.44■□□□□ 0.38
COL9A3-201ENST00000343916 SPARCP09486 303 aa17.44■□□□□ 0.38
COL9A3-201ENST00000343916 CDK2P24941 298 aa17.44■□□□□ 0.38
COL9A3-201ENST00000343916 PTH2RP49190 550 aa17.44■□□□□ 0.38
COL9A3-201ENST00000343916 C9orf62Q8N4C0 152 aa17.44■□□□□ 0.38
COL9A3-201ENST00000343916 CMTM3Q96MX0 182 aa17.44■□□□□ 0.38
COL9A3-201ENST00000343916 FOXJ3Q9UPW0 622 aa17.44■□□□□ 0.38
COL9A3-201ENST00000343916 CPED1A4D0V7 1026 aa17.44■□□□□ 0.38
COL9A3-201ENST00000343916 OR6C76A6NM76 312 aa17.44■□□□□ 0.38
COL9A3-201ENST00000343916 ANXA2P2A6NMY6 339 aa17.44■□□□□ 0.38
COL9A3-201ENST00000343916 ZNF254O75437 659 aa17.44■□□□□ 0.38
COL9A3-201ENST00000343916 DXOO77932 396 aaKnown RBP17.44■□□□□ 0.38
COL9A3-201ENST00000343916 OR6A2O95222 327 aa17.44■□□□□ 0.38
COL9A3-201ENST00000343916 ANXA2P07355 339 aaKnown RBP17.44■□□□□ 0.38
COL9A3-201ENST00000343916 STOMP27105 288 aa17.44■□□□□ 0.38
COL9A3-201ENST00000343916 TMEM69Q5SWH9 247 aa17.44■□□□□ 0.38
COL9A3-201ENST00000343916 TSSK4Q6SA08 328 aa17.44■□□□□ 0.38
COL9A3-201ENST00000343916 MDGA2Q7Z553 956 aa17.44■□□□□ 0.38
COL9A3-201ENST00000343916 DND1Q8IYX4 353 aaKnown RBP17.44■□□□□ 0.38
COL9A3-201ENST00000343916 ANGPTL6Q8NI99 470 aa17.44■□□□□ 0.38
COL9A3-201ENST00000343916 GIMAP1Q8WWP7 306 aa17.44■□□□□ 0.38
COL9A3-201ENST00000343916 S100A16Q96FQ6 103 aaKnown RBP17.44■□□□□ 0.38
COL9A3-201ENST00000343916 ARL5BQ96KC2 179 aa17.44■□□□□ 0.38
COL9A3-201ENST00000343916 OR51J1Q9H342 316 aa17.44■□□□□ 0.38
COL9A3-201ENST00000343916 FLVCR2Q9UPI3 526 aa17.44■□□□□ 0.38
COL9A3-201ENST00000343916 SLC22A13Q9Y226 551 aa17.44■□□□□ 0.38
COL9A3-201ENST00000343916 FKBP7Q9Y680 259 aa17.44■□□□□ 0.38
COL9A3-201ENST00000343916 TMEM212A6NML5 194 aa17.43■□□□□ 0.38
COL9A3-201ENST00000343916 PLPP3O14495 311 aa17.43■□□□□ 0.38
COL9A3-201ENST00000343916 MPZL1O95297 269 aa17.43■□□□□ 0.38
COL9A3-201ENST00000343916 PI4KAP42356 2102 aa17.43■□□□□ 0.38
COL9A3-201ENST00000343916 GSG1Q2KHT4 349 aa17.43■□□□□ 0.38
COL9A3-201ENST00000343916 RHBDD2Q6NTF9 364 aa17.43■□□□□ 0.38
COL9A3-201ENST00000343916 FAAP20Q6NZ36 180 aa17.43■□□□□ 0.38
COL9A3-201ENST00000343916 KMT5CQ86Y97 462 aa17.43■□□□□ 0.38
COL9A3-201ENST00000343916 OR8H1Q8NGG4 311 aa17.43■□□□□ 0.38
COL9A3-201ENST00000343916 PIGKQ92643 395 aa17.43■□□□□ 0.38
COL9A3-201ENST00000343916 HLA-CQ95604 372 aa17.43■□□□□ 0.38
COL9A3-201ENST00000343916 SHDQ96IW2 340 aa17.43■□□□□ 0.38
COL9A3-201ENST00000343916 C4orf45Q96LM5 186 aa17.43■□□□□ 0.38
COL9A3-201ENST00000343916 DCBLD2Q96PD2 775 aa17.43■□□□□ 0.38
COL9A3-201ENST00000343916 TXNIPQ9H3M7 391 aa17.43■□□□□ 0.38
COL9A3-201ENST00000343916 FSCN3Q9NQT6 498 aa17.43■□□□□ 0.38
COL9A3-201ENST00000343916 WNT16Q9UBV4 365 aa17.43■□□□□ 0.38
COL9A3-201ENST00000343916 SUSD2Q9UGT4 822 aa17.43■□□□□ 0.38
COL9A3-201ENST00000343916 VDAC3Q9Y277 283 aa17.43■□□□□ 0.38
COL9A3-201ENST00000343916 K7ESF4 209 aa17.43■□□□□ 0.38
COL9A3-201ENST00000343916 AHSA1O95433 338 aa17.43■□□□□ 0.38
COL9A3-201ENST00000343916 PNPP00491 289 aa17.43■□□□□ 0.38
COL9A3-201ENST00000343916 H2AFB2P0C5Z0 115 aa17.43■□□□□ 0.38
COL9A3-201ENST00000343916 ADAM8P78325 824 aa17.43■□□□□ 0.38
COL9A3-201ENST00000343916 DYRK1AQ13627 763 aa17.43■□□□□ 0.38
COL9A3-201ENST00000343916 SLC22A10Q63ZE4 541 aa17.43■□□□□ 0.38
COL9A3-201ENST00000343916 GLB1L2Q8IW92 636 aa17.43■□□□□ 0.38
COL9A3-201ENST00000343916 CCDC28AQ8IWP9 274 aa17.43■□□□□ 0.38
COL9A3-201ENST00000343916 GPR148Q8TDV2 347 aa17.43■□□□□ 0.38
COL9A3-201ENST00000343916 OR6C1Q96RD1 312 aa17.43■□□□□ 0.38
COL9A3-201ENST00000343916 CDX2Q99626 313 aaPredicted RBP17.43■□□□□ 0.38
COL9A3-201ENST00000343916 CCKBRP32239 447 aa17.42■□□□□ 0.38
COL9A3-201ENST00000343916 ST3GAL2Q16842 350 aa17.42■□□□□ 0.38
COL9A3-201ENST00000343916 WDR45BQ5MNZ6 344 aa17.42■□□□□ 0.38
COL9A3-201ENST00000343916 GUSBP11Q6P575 273 aa17.42■□□□□ 0.38
COL9A3-201ENST00000343916 TSEN15Q8WW01 171 aaKnown RBP17.42■□□□□ 0.38
COL9A3-201ENST00000343916 HAVCR1Q96D42 359 aa17.42■□□□□ 0.38
COL9A3-201ENST00000343916 HYLS1Q96M11 299 aa17.42■□□□□ 0.38
COL9A3-201ENST00000343916 OR8B4Q96RC9 309 aa17.42■□□□□ 0.38
COL9A3-201ENST00000343916 HRASLSQ9HDD0 168 aa17.42■□□□□ 0.38
COL9A3-201ENST00000343916 COPZ2Q9P299 210 aa17.42■□□□□ 0.38
COL9A3-201ENST00000343916 IGLV1-36A0A0B4J1U3 117 aa17.42■□□□□ 0.38
COL9A3-201ENST00000343916 SLC22A23A1A5C7 686 aa17.42■□□□□ 0.38
COL9A3-201ENST00000343916 GABARAPH6UMI1 98 aa17.42■□□□□ 0.38
COL9A3-201ENST00000343916 FBXO45P0C2W1 286 aa17.42■□□□□ 0.38
COL9A3-201ENST00000343916 CXCL12P48061 93 aa17.42■□□□□ 0.38
COL9A3-201ENST00000343916 CCR9P51686 369 aa17.42■□□□□ 0.38
COL9A3-201ENST00000343916 ART1P52961 327 aa17.42■□□□□ 0.38
COL9A3-201ENST00000343916 OR7E24Q6IFN5 339 aa17.42■□□□□ 0.38
COL9A3-201ENST00000343916 ARSKQ6UWY0 536 aa17.42■□□□□ 0.38
COL9A3-201ENST00000343916 ANKRD37Q7Z713 158 aa17.42■□□□□ 0.38
COL9A3-201ENST00000343916 WDFY1Q8IWB7 410 aa17.42■□□□□ 0.38
COL9A3-201ENST00000343916 MNTQ99583 582 aa17.42■□□□□ 0.38
COL9A3-201ENST00000343916 C20orf85Q9H1P6 137 aa17.42■□□□□ 0.38
COL9A3-201ENST00000343916 MED11Q9P086 117 aa17.42■□□□□ 0.38
COL9A3-201ENST00000343916 KLHL9Q9P2J3 617 aa17.42■□□□□ 0.38
COL9A3-201ENST00000343916 CPAMD8Q8IZJ3 1885 aa17.41■□□□□ 0.38
COL9A3-201ENST00000343916 TRBV5-7A0A0A0MS05 114 aa17.41■□□□□ 0.38
COL9A3-201ENST00000343916 LEUTXA8MZ59 168 aa17.41■□□□□ 0.38
COL9A3-201ENST00000343916 SHISA8B8ZZ34 492 aa17.41■□□□□ 0.38
COL9A3-201ENST00000343916 CALCBP10092 127 aa17.41■□□□□ 0.38
COL9A3-201ENST00000343916 ARRB1P49407 418 aaPredicted RBP17.41■□□□□ 0.38
COL9A3-201ENST00000343916 RASGEF1BQ0VAM2 473 aa17.41■□□□□ 0.38
COL9A3-201ENST00000343916 SLC17A1Q14916 467 aa17.41■□□□□ 0.38
COL9A3-201ENST00000343916 TMEM71Q6P5X7 295 aa17.41■□□□□ 0.38
COL9A3-201ENST00000343916 BTN2A1Q7KYR7 527 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms