RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 TTRP02766 147 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 ZNF728P0DKX0 622 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 CORO1AP31146 461 aaKnown RBP5.73□□□□□ -1.49
VCAN-203ENST00000343200 SELENOWP63302 87 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 PCBP2Q15366 365 aaKnown RBP eCLIP5.73□□□□□ -1.499e-7■■■□□ 15.9
VCAN-203ENST00000343200 OVCH1Q7RTY7 1134 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 THNSL2Q86YJ6 484 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 RELTQ969Z4 430 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 IER2Q9BTL4 223 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 MRPL17Q9NRX2 175 aaKnown RBP5.73□□□□□ -1.49
VCAN-203ENST00000343200 CNIH4Q9P003 139 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 ELF5Q9UKW6 265 aaPredicted RBP5.73□□□□□ -1.49
VCAN-203ENST00000343200 RAB22AQ9UL26 194 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 HHLA2Q9UM44 414 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 EDDM13A0A1B0GTR0 161 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 A0A1W2PNV4 684 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 A0A1W2PQH9 124 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 GLOD5A6NK44 160 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 OR52A4PA6NMU1 304 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 GLUD1P00367 558 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 ORM1P02763 201 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 ABCD3P28288 659 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 CTU2Q2VPK5 515 aaKnown RBP5.73□□□□□ -1.49
VCAN-203ENST00000343200 FAM26EQ8N5C1 309 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 GLIS3Q8NEA6 775 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 TDP1Q9NUW8 608 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 A0A0G2JMZ2 1700 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 LRRC37A2A6NM11 1700 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 LRRC37AA6NMS7 1700 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 A0A0G2JLW4 131 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 SERTM2A0A1B0GWG4 89 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 A0A1W2PPH5 198 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 SLC17A3O00476 420 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 NUDT21O43809 227 aaKnown RBP5.73□□□□□ -1.49
VCAN-203ENST00000343200 APBA3O96018 575 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 ARG2P78540 354 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 BTG3Q14201 252 aaPredicted RBP5.73□□□□□ -1.49
VCAN-203ENST00000343200 PRAMEF18Q5VWM3 479 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 OR10J5Q8NHC4 309 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 ASB11Q8WXH4 323 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 SAT2Q96F10 170 aaPredicted RBP5.73□□□□□ -1.49
VCAN-203ENST00000343200 TEAD3Q99594 435 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 NMES1Q9C002 83 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 LINC00597Q9H2U6 94 aa5.73□□□□□ -1.49
VCAN-203ENST00000343200 NID2Q14112 1375 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 A6NLC8 198 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 CDRT15L2A8MXV6 281 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 NME4O00746 187 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 UGDHO60701 494 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 RNF144AP50876 292 aaPredicted RBP5.72□□□□□ -1.49
VCAN-203ENST00000343200 SLC14A2Q15849 920 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 MAJINQ3KP22 176 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 RAB6CQ53S08 254 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 MAMDC4Q6UXC1 1216 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 SCGB1D4Q6XE38 83 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 FBXO27Q8NI29 283 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 FCRL5Q96RD9 977 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 GABARAPL1Q9H0R8 117 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 OR51M1Q9H341 326 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 OR14J1Q9UGF5 321 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 RNF24Q9Y225 148 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 UBIAD1Q9Y5Z9 338 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 OR2A25A4D2G3 310 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 RNASET2O00584 256 aaKnown RBP5.72□□□□□ -1.49
VCAN-203ENST00000343200 EMP1P54849 157 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 SLC25A11Q02978 314 aaKnown RBP5.72□□□□□ -1.49
VCAN-203ENST00000343200 NFATC2Q13469 925 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 ADPRMQ3LIE5 342 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 PM20D1Q6GTS8 502 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 PRSS58Q8IYP2 241 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 CLEC1AQ8NC01 280 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 NUP43Q8NFH3 380 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 NUP37Q8NFH4 326 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 NUDCD2Q8WVJ2 157 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 STARD4Q96DR4 205 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 CLEC3AO75596 197 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 CD37P11049 281 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 SLC25A6P12236 298 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 CEBPBP17676 345 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 BTF3P20290 206 aaKnown RBP5.72□□□□□ -1.49
VCAN-203ENST00000343200 FECHP22830 423 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 OPRD1P41143 372 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 NOVA1P51513 510 aaKnown RBP5.72□□□□□ -1.49
VCAN-203ENST00000343200 DIO3P55073 304 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 PPP2CBP62714 309 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 ERASQ7Z444 233 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 OR4K5Q8NGD3 323 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 C19orf43Q9BQ61 176 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 TMEM231Q9H6L2 316 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 CLDN5O00501 218 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 ATXN1LP0C7T5 689 aaKnown RBP5.72□□□□□ -1.49
VCAN-203ENST00000343200 JMJD7P0C870 316 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 CLDN8P56748 225 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 LRRC32Q14392 662 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 IL17AQ16552 155 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 ANGPTL5Q86XS5 388 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.72□□□□□ -1.49
VCAN-203ENST00000343200 SECTM1Q8WVN6 248 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 ABHD6Q9BV23 337 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 DDA1Q9BW61 102 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms