RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 KCNQ1P51787 676 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 WDR5P61964 334 aaKnown RBP16.35■□□□□ 0.21
SMAD4-201ENST00000342988 TRA2BP62995 288 aaKnown RBP16.35■□□□□ 0.21
SMAD4-201ENST00000342988 NCR3LG1Q68D85 454 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 FIGLAQ6QHK4 219 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 PDZD3Q86UT5 571 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 MFSD4AQ8N468 514 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 CYB561A3Q8NBI2 242 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 OR51A4Q8NGJ6 313 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 SMIM7Q9BQ49 75 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 SLC25A32Q9H2D1 315 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 CA12O43570 354 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 TBX18O95935 607 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 ZNF691Q5VV52 312 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 UTP23Q9BRU9 249 aaKnown RBP16.35■□□□□ 0.21
SMAD4-201ENST00000342988 FZD1Q9UP38 647 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 PIK3C2BO00750 1634 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 EIF1BO60739 113 aaKnown RBP16.35■□□□□ 0.21
SMAD4-201ENST00000342988 LYZL6O75951 148 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 GJA4P35212 333 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 PHLDA2Q53GA4 152 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 PTRH2Q9Y3E5 179 aaKnown RBP16.35■□□□□ 0.21
SMAD4-201ENST00000342988 TARBP1Q13395 1621 aaKnown RBP16.35■□□□□ 0.21
SMAD4-201ENST00000342988 TMEM238LA0A1B0GVL6 79 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 PRAMEF25A6NGN4 478 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 IGLON5A6NGN9 336 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 A6NJY4 79 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 VEZF1Q14119 521 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 PRAMEF5Q5TYX0 476 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 PRAMEF6Q5VXH4 476 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 RHOFQ9HBH0 211 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 WNT6Q9Y6F9 365 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 AGLP35573 1532 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 LEFTY2O00292 366 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 SH2D1BO14796 132 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 ELNP15502 786 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 DACT2Q5SW24 774 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 OR14A16Q8NHC5 309 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 PHYHIPQ92561 330 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 AMBRA1Q9C0C7 1298 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 TOLLIPQ9H0E2 274 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 NOCTQ9UK39 431 aaKnown RBP16.34■□□□□ 0.21
SMAD4-201ENST00000342988 SOWAHBA6NEL2 793 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 NKX2-1P43699 371 aaPredicted RBP16.34■□□□□ 0.21
SMAD4-201ENST00000342988 GATMP50440 423 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 GPM6AP51674 278 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 POU3F1Q03052 451 aaPredicted RBP16.34■□□□□ 0.21
SMAD4-201ENST00000342988 MBTPS1Q14703 1052 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 WDR74Q6RFH5 385 aaPredicted RBP16.34■□□□□ 0.21
SMAD4-201ENST00000342988 NKX2-4Q9H2Z4 354 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 OSGIN1Q9UJX0 560 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 PADI1Q9ULC6 663 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 MRPS28Q9Y2Q9 187 aaKnown RBP16.34■□□□□ 0.21
SMAD4-201ENST00000342988 YKT6O15498 198 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 CD1DP15813 335 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 NPAS1Q99742 590 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 RBFOX1Q9NWB1 397 aaKnown RBP16.34■□□□□ 0.21
SMAD4-201ENST00000342988 EIF1P41567 113 aaKnown RBP16.34■□□□□ 0.21
SMAD4-201ENST00000342988 KIR2DS3Q14952 304 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 TTC32Q5I0X7 151 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 TMEM139Q8IV31 216 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 DYNC2LI1Q8TCX1 351 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 LCORQ96JN0 433 aaPredicted RBP16.34■□□□□ 0.21
SMAD4-201ENST00000342988 ZDHHC5Q9C0B5 715 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 OR1A1Q9P1Q5 309 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 GPR25O00155 361 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 TOX3O15405 576 aaPredicted RBP16.34■□□□□ 0.21
SMAD4-201ENST00000342988 DNPH1O43598 174 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 PLEKHA2Q9HB19 425 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 KIF13BQ9NQT8 1826 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 OR5AL1P0C617 328 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 FKBP2P26885 142 aaKnown RBP16.34■□□□□ 0.21
SMAD4-201ENST00000342988 ACVR1CQ8NER5 493 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 ACVRL1P37023 503 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 ARSDP51689 593 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 OR4A4PQ8NGN8 299 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 CLEC4CQ8WTT0 213 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 BRI3BPQ8WY22 251 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 LRIT1Q9P2V4 623 aa16.34■□□□□ 0.21
SMAD4-201ENST00000342988 CST2P09228 141 aa16.33■□□□□ 0.21
SMAD4-201ENST00000342988 B3GNT9Q6UX72 402 aa16.33■□□□□ 0.21
SMAD4-201ENST00000342988 MRAP2Q96G30 205 aa16.33■□□□□ 0.21
SMAD4-201ENST00000342988 COMMD5Q9GZQ3 224 aa16.33■□□□□ 0.21
SMAD4-201ENST00000342988 DIP2BQ9P265 1576 aa16.33■□□□□ 0.21
SMAD4-201ENST00000342988 ZNF320A2RRD8 509 aa16.33■□□□□ 0.21
SMAD4-201ENST00000342988 DCTP40126 519 aa16.33■□□□□ 0.21
SMAD4-201ENST00000342988 AKR1C3P42330 323 aa16.33■□□□□ 0.21
SMAD4-201ENST00000342988 PAX5Q02548 391 aa16.33■□□□□ 0.21
SMAD4-201ENST00000342988 OR8G1Q15617 311 aa16.33■□□□□ 0.21
SMAD4-201ENST00000342988 NAXDQ8IW45 347 aa16.33■□□□□ 0.21
SMAD4-201ENST00000342988 NAT6Q93015 286 aa16.33■□□□□ 0.21
SMAD4-201ENST00000342988 ZNF845Q96IR2 970 aaPredicted RBP16.33■□□□□ 0.21
SMAD4-201ENST00000342988 ING1Q9UK53 422 aaPredicted RBP16.33■□□□□ 0.21
SMAD4-201ENST00000342988 INSL5Q9Y5Q6 135 aa16.33■□□□□ 0.21
SMAD4-201ENST00000342988 TECPR2O15040 1411 aa16.33■□□□□ 0.21
SMAD4-201ENST00000342988 HENMT1Q5T8I9 393 aaKnown RBP16.33■□□□□ 0.2
SMAD4-201ENST00000342988 OR10P1Q8NGE3 313 aa16.33■□□□□ 0.2
SMAD4-201ENST00000342988 OR1L3Q8NH93 324 aa16.33■□□□□ 0.2
SMAD4-201ENST00000342988 MRPS16Q9Y3D3 137 aaKnown RBP16.33■□□□□ 0.2
SMAD4-201ENST00000342988 TRAPPC1Q9Y5R8 145 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms