RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 URM1Q9BTM9 101 aaKnown RBP11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 BANF2Q9H503 90 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 POMT2Q9UKY4 750 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 MEGF11A6BM72 1044 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 HEXBP07686 556 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 UBBP0CG47 229 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 UBCP0CG48 685 aaKnown RBP11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 CAPZA1P52907 286 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 CLDN6P56747 220 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 FUT5Q11128 374 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 CAMK2DQ13557 499 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 SLC36A2Q495M3 483 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 OR11H4Q8NGC9 324 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 OR51T1Q8NGJ9 327 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 GPR119Q8TDV5 335 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 SCARB1Q8WTV0 552 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 ARL11Q969Q4 196 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 HHIPQ96QV1 700 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 PPP4R1LQ9P1A2 415 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 ADRB1P08588 477 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 ANKRD34CP0C6C1 535 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 BDH1Q02338 343 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 DYRK1AQ13627 763 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 PXKQ7Z7A4 578 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 SLC51BQ86UW2 128 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 ELP5Q8TE02 316 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 CXorf58Q96LI9 332 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 NECAB3Q96P71 396 aaPredicted RBP11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 OR5B2Q96R09 309 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 SIGLEC11Q96RL6 698 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 ZNF416Q9BWM5 594 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 RBM24Q9BX46 236 aaKnown RBP11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 RPS10P5Q9NQ39 176 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 BRINP1O60477 761 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 GALR3O60755 368 aaPredicted RBP11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 LDOC1O95751 146 aaPredicted RBP11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 CFDP00746 253 aaPredicted RBP11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 GIPP09681 153 aaPredicted RBP11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 TMIGD3P0DMS9 266 aaPredicted RBP11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 TSFMP43897 325 aaKnown RBP11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 WDR88Q6ZMY6 472 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 SLC16A9Q7RTY1 509 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 GKN2Q86XP6 184 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 FAM160A2Q8N612 972 aaPredicted RBP11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 OR2G2Q8NGZ5 317 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 ZDHHC12Q96GR4 267 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 TEX101Q9BY14 249 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 RGCCQ9H4X1 137 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 ZNF768Q9H5H4 540 aaKnown RBP11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 SLCO1C1Q9NYB5 712 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 OR5V1Q9UGF6 321 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 HRH3Q9Y5N1 445 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 HRKO00198 91 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 CBR1P16152 277 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 HOXB9P17482 250 aaPredicted RBP11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 NME2P22392 152 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 GABRR1P24046 479 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 SERTAD2Q14140 314 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 DCXRQ7Z4W1 244 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 C19orf47Q8N9M1 422 aaKnown RBP11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 TMED6Q8WW62 240 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 CNTNAP3BQ96NU0 1288 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 PRRG4Q9BZD6 226 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 TINAGL1Q9GZM7 467 aaPredicted RBP11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 ALKBH4Q9NXW9 302 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 DSPPQ9NZW4 1301 aa11.33□□□□□ -0.6
SNRNP48-201ENST00000342415 CHD5Q8TDI0 1954 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 IGKV1-8A0A0C4DH67 115 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 TMEM229AB2RXF0 380 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 HCRTR1O43613 425 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 SUSD5O60279 629 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 TRAPPC6AO75865 159 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 IL32P24001 234 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 AVPR2P30518 371 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 VWA2Q5GFL6 755 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 CBLN3Q6UW01 205 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 FAM219AQ8IW50 185 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 BCORP1Q8N888 145 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 OR10AC1Q8NH08 325 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 MAFIPQ8WZ33 124 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 MRI1Q9BV20 369 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 EXOGQ9Y2C4 368 aaKnown RBP11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 BRCA1P38398 1863 aaKnown RBP11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 MEIKINA0A087WXM9 373 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 PHYHO14832 338 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 SEC14L5O43304 696 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 SNRNP70P08621 437 aaKnown RBP11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 SERPINA2P20848 420 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 CRABP1P29762 137 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 NUDT1P36639 197 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 PPT1P50897 306 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 MLC1Q15049 377 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 EBPQ15125 230 aaKnown RBP11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 TMEM196Q5HYL7 178 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 BATF2Q8N1L9 274 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 SLC2A12Q8TD20 617 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 FGF14Q92915 247 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 LINC00052Q96N35 136 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 SCGB3A2Q96PL1 93 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms