RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 VRK2Q86Y07 508 aa12.84□□□□□ -0.35
PDE4D-203ENST00000340635 RPS16P62249 146 aaKnown RBP12.84□□□□□ -0.35
PDE4D-203ENST00000340635 RNF24Q9Y225 148 aa12.84□□□□□ -0.35
PDE4D-203ENST00000340635 ZNF541Q9H0D2 1346 aa12.83□□□□□ -0.35
PDE4D-203ENST00000340635 HCRTO43612 131 aa12.83□□□□□ -0.35
PDE4D-203ENST00000340635 SLC25A6P12236 298 aa12.83□□□□□ -0.35
PDE4D-203ENST00000340635 CPEP16870 476 aa12.83□□□□□ -0.35
PDE4D-203ENST00000340635 S100A11P31949 105 aa12.83□□□□□ -0.35
PDE4D-203ENST00000340635 RPS23P62266 143 aaKnown RBP12.83□□□□□ -0.35
PDE4D-203ENST00000340635 PIWIL3Q7Z3Z3 882 aaKnown RBP12.83□□□□□ -0.35
PDE4D-203ENST00000340635 UBE3DQ7Z6J8 389 aa12.83□□□□□ -0.35
PDE4D-203ENST00000340635 OR8B4Q96RC9 309 aa12.83□□□□□ -0.35
PDE4D-203ENST00000340635 STC2O76061 302 aa12.83□□□□□ -0.36
PDE4D-203ENST00000340635 TNFRSF4P43489 277 aa12.83□□□□□ -0.36
PDE4D-203ENST00000340635 CLDN12P56749 244 aa12.83□□□□□ -0.36
PDE4D-203ENST00000340635 MISPQ8IVT2 679 aa12.83□□□□□ -0.36
PDE4D-203ENST00000340635 ASIC5Q9NY37 505 aa12.83□□□□□ -0.36
PDE4D-203ENST00000340635 ACOD1A6NK06 481 aa12.83□□□□□ -0.36
PDE4D-203ENST00000340635 GPR37O15354 613 aa12.83□□□□□ -0.36
PDE4D-203ENST00000340635 SCRG1O75711 98 aa12.83□□□□□ -0.36
PDE4D-203ENST00000340635 ERV3-1Q14264 604 aa12.83□□□□□ -0.36
PDE4D-203ENST00000340635 IGSF8Q969P0 613 aa12.83□□□□□ -0.36
PDE4D-203ENST00000340635 SLC12A9Q9BXP2 914 aa12.83□□□□□ -0.36
PDE4D-203ENST00000340635 NUDT19A8MXV4 375 aa12.83□□□□□ -0.36
PDE4D-203ENST00000340635 HMGN2P05204 90 aaKnown RBP12.83□□□□□ -0.36
PDE4D-203ENST00000340635 SNRPBP14678 240 aaKnown RBP12.83□□□□□ -0.36
PDE4D-203ENST00000340635 PSMB1P20618 241 aaKnown RBP12.83□□□□□ -0.36
PDE4D-203ENST00000340635 PLXDC2Q6UX71 529 aa12.83□□□□□ -0.36
PDE4D-203ENST00000340635 FYTTD1Q96QD9 318 aaKnown RBP12.83□□□□□ -0.36
PDE4D-203ENST00000340635 ATP23Q9Y6H3 246 aa12.83□□□□□ -0.36
PDE4D-203ENST00000340635 ASCC3Q8N3C0 2202 aaKnown RBP12.83□□□□□ -0.36
PDE4D-203ENST00000340635 TMEM72A0PK05 275 aa12.83□□□□□ -0.36
PDE4D-203ENST00000340635 FGF4P08620 206 aa12.83□□□□□ -0.36
PDE4D-203ENST00000340635 OR8G3PP0DMU2 310 aa12.83□□□□□ -0.36
PDE4D-203ENST00000340635 RTL8AQ9BWD3 113 aa12.83□□□□□ -0.36
PDE4D-203ENST00000340635 AAMDCQ9H7C9 122 aa12.83□□□□□ -0.36
PDE4D-203ENST00000340635 MN1Q10571 1320 aaPredicted RBP12.83□□□□□ -0.36
PDE4D-203ENST00000340635 I6L893 689 aaPredicted RBP12.83□□□□□ -0.36
PDE4D-203ENST00000340635 LINC00696Q6ZRV3 163 aa12.83□□□□□ -0.36
PDE4D-203ENST00000340635 PRSS35Q8N3Z0 413 aa12.83□□□□□ -0.36
PDE4D-203ENST00000340635 PQLC3Q8N755 202 aa12.83□□□□□ -0.36
PDE4D-203ENST00000340635 NKAIN3Q8N8D7 197 aa12.83□□□□□ -0.36
PDE4D-203ENST00000340635 MOKQ9UQ07 419 aa12.83□□□□□ -0.36
PDE4D-203ENST00000340635 TPPP2P59282 170 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 CSNK1G2P78368 415 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 NHLH1Q02575 133 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 NHLH2Q02577 135 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 PDZK1IP1Q13113 114 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 TOR2AQ5JU69 321 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 MRPL2Q5T653 305 aaKnown RBP12.82□□□□□ -0.36
PDE4D-203ENST00000340635 C5orf46Q6UWT4 87 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 BHLHE23Q8NDY6 225 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 OR6K3Q8NGY3 331 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 TMEM208Q9BTX3 173 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 RAB22AQ9UL26 194 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 A3GALT2U3KPV4 340 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 RGPD5Q99666 1765 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 ZNF727A8MUV8 499 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 RD3LP0DJH9 198 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 NKX2-1P43699 371 aaPredicted RBP12.82□□□□□ -0.36
PDE4D-203ENST00000340635 ZNF85Q03923 595 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 MYBPHQ13203 477 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 SPANXN5Q5MJ07 72 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 VGLL2Q8N8G2 317 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 KHSRPQ92945 711 aaKnown RBP eCLIP12.82□□□□□ -0.361e-6■□□□□ 8
PDE4D-203ENST00000340635 CPPED1Q9BRF8 314 aaPredicted RBP12.82□□□□□ -0.36
PDE4D-203ENST00000340635 NKX2-4Q9H2Z4 354 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 LOC100289279A0A1B0GTE1 492 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 PMS2P2O95744 297 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 TPOP07202 933 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 VEZF1Q14119 521 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 THEM4Q5T1C6 240 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 EID2Q8N6I1 236 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 C11orf40Q8WZ69 217 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 GAL3ST2Q9H3Q3 398 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 KLRC4-KLRK1H3BQV0 150 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 ADGRE4PQ86SQ3 457 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 ZFP62Q8NB50 900 aaPredicted RBP12.82□□□□□ -0.36
PDE4D-203ENST00000340635 DVL3Q92997 716 aaPredicted RBP12.82□□□□□ -0.36
PDE4D-203ENST00000340635 TMIGD2Q96BF3 282 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 MOB3AQ96BX8 217 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 DCAF13Q9NV06 445 aaKnown RBP12.82□□□□□ -0.36
PDE4D-203ENST00000340635 IGLV3-22A0A075B6J6 115 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 P2RY10O00398 339 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 GABRB3P28472 473 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 OR5AS1Q8N127 324 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 TMEM123Q8N131 208 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 OR4A4PQ8NGN8 299 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 PKMYT1Q99640 499 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 SCN2AQ99250 2005 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 OR52A4PA6NMU1 304 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 M0QYG6 137 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 CNMDO75829 334 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 CPMP14384 443 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 AKR1C3P42330 323 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 REEP5Q00765 189 aa12.82□□□□□ -0.36
PDE4D-203ENST00000340635 FUBP1Q96AE4 644 aaKnown RBP12.82□□□□□ -0.36
PDE4D-203ENST00000340635 SORBS1Q9BX66 1292 aaKnown RBP12.82□□□□□ -0.36
PDE4D-203ENST00000340635 COMMD5Q9GZQ3 224 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms