RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 THEM4Q5T1C6 240 aa13.29□□□□□ -0.28
UBE3B-201ENST00000340074 SLC25A47Q6Q0C1 308 aa13.29□□□□□ -0.28
UBE3B-201ENST00000340074 SLC22A25Q6T423 547 aa13.29□□□□□ -0.28
UBE3B-201ENST00000340074 MDP1Q86V88 176 aa13.29□□□□□ -0.28
UBE3B-201ENST00000340074 SKA3Q8IX90 412 aa13.29□□□□□ -0.28
UBE3B-201ENST00000340074 NINJ1Q92982 152 aa13.29□□□□□ -0.28
UBE3B-201ENST00000340074 UTP4Q969X6 686 aaKnown RBP13.29□□□□□ -0.28
UBE3B-201ENST00000340074 SAMD8Q96LT4 415 aa13.29□□□□□ -0.28
UBE3B-201ENST00000340074 SLC38A2Q96QD8 506 aa13.29□□□□□ -0.28
UBE3B-201ENST00000340074 RBP7Q96R05 134 aa13.29□□□□□ -0.28
UBE3B-201ENST00000340074 YY1AP1Q9H869 796 aa13.29□□□□□ -0.28
UBE3B-201ENST00000340074 SMURF2Q9HAU4 748 aa13.29□□□□□ -0.28
UBE3B-201ENST00000340074 B3GNT2Q9NY97 397 aa13.29□□□□□ -0.28
UBE3B-201ENST00000340074 ITGB1BP2Q9UKP3 347 aa13.29□□□□□ -0.28
UBE3B-201ENST00000340074 CELSR1Q9NYQ6 3014 aa13.28□□□□□ -0.28
UBE3B-201ENST00000340074 SOCS2O14508 198 aa13.28□□□□□ -0.28
UBE3B-201ENST00000340074 PPP1R3DO95685 299 aa13.28□□□□□ -0.28
UBE3B-201ENST00000340074 IGLV1-44P01699 117 aa13.28□□□□□ -0.28
UBE3B-201ENST00000340074 CELA3BP08861 270 aa13.28□□□□□ -0.28
UBE3B-201ENST00000340074 NR2C1P13056 603 aa13.28□□□□□ -0.28
UBE3B-201ENST00000340074 CBR1P16152 277 aa13.28□□□□□ -0.28
UBE3B-201ENST00000340074 SLC6A6P31641 620 aa13.28□□□□□ -0.28
UBE3B-201ENST00000340074 CDAP32320 146 aa13.28□□□□□ -0.28
UBE3B-201ENST00000340074 IDH3GP51553 393 aaPredicted RBP13.28□□□□□ -0.28
UBE3B-201ENST00000340074 RPS6KA3P51812 740 aa13.28□□□□□ -0.28
UBE3B-201ENST00000340074 KRR1Q13601 381 aaKnown RBP13.28□□□□□ -0.28
UBE3B-201ENST00000340074 CCNIQ14094 377 aa13.28□□□□□ -0.28
UBE3B-201ENST00000340074 GK3PQ14409 553 aa13.28□□□□□ -0.28
UBE3B-201ENST00000340074 GSG1Q2KHT4 349 aa13.28□□□□□ -0.28
UBE3B-201ENST00000340074 ZNF672Q499Z4 452 aaPredicted RBP13.28□□□□□ -0.28
UBE3B-201ENST00000340074 GPR139Q6DWJ6 353 aa13.28□□□□□ -0.28
UBE3B-201ENST00000340074 ZNF620Q6ZNG0 422 aa13.28□□□□□ -0.28
UBE3B-201ENST00000340074 TMEM179BQ7Z7N9 219 aa13.28□□□□□ -0.28
UBE3B-201ENST00000340074 MYPOPQ86VE0 399 aaPredicted RBP13.28□□□□□ -0.28
UBE3B-201ENST00000340074 FAM169BQ8N8A8 192 aa13.28□□□□□ -0.28
UBE3B-201ENST00000340074 OR10G2Q8NGC3 310 aa13.28□□□□□ -0.28
UBE3B-201ENST00000340074 FGFBP3Q8TAT2 258 aa13.28□□□□□ -0.28
UBE3B-201ENST00000340074 FNDC8Q8TC99 324 aa13.28□□□□□ -0.28
UBE3B-201ENST00000340074 GTPBP3Q969Y2 492 aaKnown RBP13.28□□□□□ -0.28
UBE3B-201ENST00000340074 RADILQ96JH8 1075 aa13.28□□□□□ -0.28
UBE3B-201ENST00000340074 SH3GL3Q99963 347 aa13.28□□□□□ -0.28
UBE3B-201ENST00000340074 EGLN3Q9H6Z9 239 aa13.28□□□□□ -0.28
UBE3B-201ENST00000340074 NOX3Q9HBY0 568 aa13.28□□□□□ -0.28
UBE3B-201ENST00000340074 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.28□□□□□ -0.28
UBE3B-201ENST00000340074 UGT2A1Q9Y4X1 527 aa13.28□□□□□ -0.28
UBE3B-201ENST00000340074 MAP1AP78559 2803 aaPredicted RBP13.28□□□□□ -0.28
UBE3B-201ENST00000340074 RTTNQ86VV8 2226 aa13.27□□□□□ -0.29
UBE3B-201ENST00000340074 SLC22A23A1A5C7 686 aa13.27□□□□□ -0.29
UBE3B-201ENST00000340074 PRSS37A4D1T9 235 aa13.27□□□□□ -0.29
UBE3B-201ENST00000340074 TIPRLO75663 272 aa13.27□□□□□ -0.29
UBE3B-201ENST00000340074 CIB2O75838 187 aa13.27□□□□□ -0.29
UBE3B-201ENST00000340074 CECR9P0C854 216 aa13.27□□□□□ -0.29
UBE3B-201ENST00000340074 PATE4P0C8F1 98 aa13.27□□□□□ -0.29
UBE3B-201ENST00000340074 CD53P19397 219 aa13.27□□□□□ -0.29
UBE3B-201ENST00000340074 ARR3P36575 388 aa13.27□□□□□ -0.29
UBE3B-201ENST00000340074 CDH11P55287 796 aa13.27□□□□□ -0.29
UBE3B-201ENST00000340074 NPRL3Q12980 569 aa13.27□□□□□ -0.29
UBE3B-201ENST00000340074 C3orf36Q3SXR2 165 aa13.27□□□□□ -0.29
UBE3B-201ENST00000340074 C20orf204Q6ZNR8 217 aa13.27□□□□□ -0.29
UBE3B-201ENST00000340074 LRRC18Q8N456 261 aa13.27□□□□□ -0.29
UBE3B-201ENST00000340074 GIPC3Q8TF64 312 aa13.27□□□□□ -0.29
UBE3B-201ENST00000340074 NANOS1Q8WY41 292 aaKnown RBP13.27□□□□□ -0.29
UBE3B-201ENST00000340074 FBXW5Q969U6 566 aa13.27□□□□□ -0.29
UBE3B-201ENST00000340074 ERMAPQ96PL5 475 aaPredicted RBP13.27□□□□□ -0.29
UBE3B-201ENST00000340074 IFT27Q9BW83 186 aa13.27□□□□□ -0.29
UBE3B-201ENST00000340074 SEC61A2Q9H9S3 476 aa13.27□□□□□ -0.29
UBE3B-201ENST00000340074 MOV10Q9HCE1 1003 aaKnown RBP13.27□□□□□ -0.29
UBE3B-201ENST00000340074 DNAJB9Q9UBS3 223 aa13.27□□□□□ -0.29
UBE3B-201ENST00000340074 POU2F3Q9UKI9 436 aa13.27□□□□□ -0.29
UBE3B-201ENST00000340074 VPS13CQ709C8 3753 aa13.26□□□□□ -0.29
UBE3B-201ENST00000340074 IMPA2O14732 288 aa13.26□□□□□ -0.29
UBE3B-201ENST00000340074 AHCYL1O43865 530 aa13.26□□□□□ -0.29
UBE3B-201ENST00000340074 ENTPD5O75356 428 aa13.26□□□□□ -0.29
UBE3B-201ENST00000340074 E2F6O75461 281 aa13.26□□□□□ -0.29
UBE3B-201ENST00000340074 UBL3O95164 117 aa13.26□□□□□ -0.29
UBE3B-201ENST00000340074 FARS2O95363 451 aaKnown RBP13.26□□□□□ -0.29
UBE3B-201ENST00000340074 TXNDC12O95881 172 aa13.26□□□□□ -0.29
UBE3B-201ENST00000340074 APEHP13798 732 aaKnown RBP13.26□□□□□ -0.29
UBE3B-201ENST00000340074 CDKN2AP42771 156 aaKnown RBP13.26□□□□□ -0.29
UBE3B-201ENST00000340074 GIPRP48546 466 aa13.26□□□□□ -0.29
UBE3B-201ENST00000340074 PTDSS1P48651 473 aaKnown RBP13.26□□□□□ -0.29
UBE3B-201ENST00000340074 RAB1AP62820 205 aa13.26□□□□□ -0.29
UBE3B-201ENST00000340074 ETFDHQ16134 617 aa13.26□□□□□ -0.29
UBE3B-201ENST00000340074 NRN1LQ496H8 165 aa13.26□□□□□ -0.29
UBE3B-201ENST00000340074 CLEC12AQ5QGZ9 265 aa13.26□□□□□ -0.29
UBE3B-201ENST00000340074 RPL13AP3Q6NVV1 102 aa13.26□□□□□ -0.29
UBE3B-201ENST00000340074 RASSF6Q6ZTQ3 369 aa13.26□□□□□ -0.29
UBE3B-201ENST00000340074 PTCHD4Q6ZW05 846 aa13.26□□□□□ -0.29
UBE3B-201ENST00000340074 HS3ST5Q8IZT8 346 aa13.26□□□□□ -0.29
UBE3B-201ENST00000340074 DEPDC4Q8N2C3 294 aa13.26□□□□□ -0.29
UBE3B-201ENST00000340074 ZNF611Q8N823 705 aa13.26□□□□□ -0.29
UBE3B-201ENST00000340074 NABP1Q96AH0 204 aa13.26□□□□□ -0.29
UBE3B-201ENST00000340074 ZNF75AQ96N20 296 aa13.26□□□□□ -0.29
UBE3B-201ENST00000340074 FEVQ99581 238 aa13.26□□□□□ -0.29
UBE3B-201ENST00000340074 CCL19Q99731 98 aa13.26□□□□□ -0.29
UBE3B-201ENST00000340074 NIPSNAP1Q9BPW8 284 aa13.26□□□□□ -0.29
UBE3B-201ENST00000340074 DGCR6LQ9BY27 220 aa13.26□□□□□ -0.29
UBE3B-201ENST00000340074 PLA2G12AQ9BZM1 189 aa13.26□□□□□ -0.29
UBE3B-201ENST00000340074 SYT4Q9H2B2 425 aa13.26□□□□□ -0.29
UBE3B-201ENST00000340074 DENND2DQ9H6A0 471 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms