RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 PIP5KL1Q5T9C9 394 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 PSRC1Q6PGN9 363 aaPredicted RBP3.81□□□□□ -1.8
NEDD4-201ENST00000338963 Q6ZRG5 221 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 VASH2Q86V25 355 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 DND1Q8IYX4 353 aaKnown RBP3.81□□□□□ -1.8
NEDD4-201ENST00000338963 FAM89BQ8N5H3 189 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 KREMEN2Q8NCW0 462 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 GPR150Q8NGU9 434 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 SFXN5Q8TD22 340 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 TOMM40LQ969M1 308 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 WDR89Q96FK6 387 aaPredicted RBP3.81□□□□□ -1.8
NEDD4-201ENST00000338963 VAMP8Q9BV40 100 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 CHRNA9Q9UGM1 479 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 PCTPQ9UKL6 214 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 PPT2Q9UMR5 302 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 HDGFL3Q9Y3E1 203 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 PSME4Q14997 1843 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 A0A1B0GTI1 187 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 SLC33A1O00400 549 aaPredicted RBP3.81□□□□□ -1.8
NEDD4-201ENST00000338963 TRAF3IP2O43734 574 aaPredicted RBP3.81□□□□□ -1.8
NEDD4-201ENST00000338963 HIST1H2BKO60814 126 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 HPRT1P00492 218 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 HBE1P02100 147 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 BCHEP06276 602 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 HIST1H2BJP06899 126 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 CD37P11049 281 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 NME2P22392 152 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 HIST1H2BOP23527 126 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 S100GP29377 79 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 BRS3P32247 399 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 HIST1H2BBP33778 126 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 FAM3BP58499 235 aaPredicted RBP3.81□□□□□ -1.8
NEDD4-201ENST00000338963 HIST1H2BDP58876 126 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 HIST1H2BCP62807 126 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 ZNF154Q13106 437 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 HIST2H2BEQ16778 126 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 CDO1Q16878 200 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 FBLN7Q53RD9 439 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.81□□□□□ -1.8
NEDD4-201ENST00000338963 CLEC18BQ6UXF7 455 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 TMEM156Q8N614 296 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 HIST1H2BHQ93079 126 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 TMEM169Q96HH4 297 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 AKR1E2Q96JD6 320 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 HIST1H2BNQ99877 126 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 HIST1H2BMQ99879 126 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 SLC17A5Q9NRA2 495 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 P4HTMQ9NXG6 502 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 FBXO4Q9UKT5 387 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 ARL5AQ9Y689 179 aa3.81□□□□□ -1.8
NEDD4-201ENST00000338963 MYO5AQ9Y4I1 1855 aaKnown RBP3.8□□□□□ -1.8
NEDD4-201ENST00000338963 LDB2O43679 373 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 CST3P01034 146 aaPredicted RBP3.8□□□□□ -1.8
NEDD4-201ENST00000338963 H1F0P07305 194 aaKnown RBP3.8□□□□□ -1.8
NEDD4-201ENST00000338963 COX7A2P14406 83 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 CELP19835 753 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 HNRNPA2B1P22626 353 aaKnown RBP3.8□□□□□ -1.8
NEDD4-201ENST00000338963 NMBRP28336 390 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 TNFAIP1Q13829 316 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 ODF4Q2M2E3 257 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 KCTD11Q693B1 232 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 USP17L6PQ6QN14 398 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 SLC35E3Q7Z769 313 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 LHFPL4Q7Z7J7 247 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 LAS2Q8IYD9 372 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 TSTD1Q8NFU3 115 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 SLC2A12Q8TD20 617 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 UBTD2Q8WUN7 234 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 DCUN1D4Q92564 292 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 PPCDCQ96CD2 204 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 IMP4Q96G21 291 aaKnown RBP3.8□□□□□ -1.8
NEDD4-201ENST00000338963 ELOVL1Q9BW60 279 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 RERGLQ9H628 205 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 SRD5A3Q9H8P0 318 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 WFDC1Q9HC57 220 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 SMPXQ9UHP9 88 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 SCML2Q9UQR0 700 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 OR5H14A6NHG9 310 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 MOXD2PA6NHM9 499 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 C9JVG2 144 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 TLX2O43763 284 aaPredicted RBP3.8□□□□□ -1.8
NEDD4-201ENST00000338963 SEC11BP0C7V7 166 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 HOXA13P31271 388 aaPredicted RBP3.8□□□□□ -1.8
NEDD4-201ENST00000338963 TAGLN2P37802 199 aaKnown RBP3.8□□□□□ -1.8
NEDD4-201ENST00000338963 COMPP49747 757 aaPredicted RBP3.8□□□□□ -1.8
NEDD4-201ENST00000338963 FAM3AP98173 230 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 RBPJQ06330 500 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 RING1Q06587 406 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 SPANXN4Q5MJ08 99 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 OR2G6Q5TZ20 316 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 ZNF585AQ6P3V2 769 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 SLC39A11Q8N1S5 342 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 OR5A2Q8NGI9 324 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 OR52I1Q8NGK6 324 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 ARRDC2Q8TBH0 407 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 SFRP2Q96HF1 295 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 FAAP24Q9BTP7 215 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 ADAT1Q9BUB4 502 aaKnown RBP3.8□□□□□ -1.8
NEDD4-201ENST00000338963 SLC5A7Q9GZV3 580 aa3.8□□□□□ -1.8
NEDD4-201ENST00000338963 APOBEC3GQ9HC16 384 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms