RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 PM20D2Q8IYS1 436 aa17.04■□□□□ 0.32
PSPC1-201ENST00000338910 CDK20Q8IZL9 346 aa17.04■□□□□ 0.32
PSPC1-201ENST00000338910 MUC20Q8N307 709 aaPredicted RBP17.04■□□□□ 0.32
PSPC1-201ENST00000338910 RCBTB1Q8NDN9 531 aa17.04■□□□□ 0.32
PSPC1-201ENST00000338910 OR10K1Q8NGX5 313 aa17.04■□□□□ 0.32
PSPC1-201ENST00000338910 VSTM2LQ96N03 204 aa17.04■□□□□ 0.32
PSPC1-201ENST00000338910 PTCHD1Q96NR3 888 aa17.04■□□□□ 0.32
PSPC1-201ENST00000338910 DUSP15Q9H1R2 295 aaPredicted RBP17.04■□□□□ 0.32
PSPC1-201ENST00000338910 MEPEQ9NQ76 525 aaPredicted RBP17.04■□□□□ 0.32
PSPC1-201ENST00000338910 GNG8Q9UK08 70 aa17.04■□□□□ 0.32
PSPC1-201ENST00000338910 ERVK-19Q9WJR5 959 aa17.04■□□□□ 0.32
PSPC1-201ENST00000338910 V9GY05 133 aa17.04■□□□□ 0.32
PSPC1-201ENST00000338910 UNC13CQ8NB66 2214 aa17.03■□□□□ 0.32
PSPC1-201ENST00000338910 ARID1BQ8NFD5 2236 aaPredicted RBP17.03■□□□□ 0.32
PSPC1-201ENST00000338910 A0A1B0GW55 424 aa17.03■□□□□ 0.32
PSPC1-201ENST00000338910 ADAM11O75078 769 aa17.03■□□□□ 0.32
PSPC1-201ENST00000338910 IFI6P09912 130 aa17.03■□□□□ 0.32
PSPC1-201ENST00000338910 DUX4L2P0CJ85 424 aa17.03■□□□□ 0.32
PSPC1-201ENST00000338910 DUX4L3P0CJ86 424 aa17.03■□□□□ 0.32
PSPC1-201ENST00000338910 DUX4L4P0CJ87 422 aa17.03■□□□□ 0.32
PSPC1-201ENST00000338910 DUX4L5P0CJ88 424 aa17.03■□□□□ 0.32
PSPC1-201ENST00000338910 DUX4L6P0CJ89 424 aa17.03■□□□□ 0.32
PSPC1-201ENST00000338910 DUX4L7P0CJ90 424 aa17.03■□□□□ 0.32
PSPC1-201ENST00000338910 MYF5P13349 255 aa17.03■□□□□ 0.32
PSPC1-201ENST00000338910 TAS2R20P59543 309 aa17.03■□□□□ 0.32
PSPC1-201ENST00000338910 MC2RQ01718 297 aa17.03■□□□□ 0.32
PSPC1-201ENST00000338910 MPPED2Q15777 294 aa17.03■□□□□ 0.32
PSPC1-201ENST00000338910 AMZ1Q400G9 498 aa17.03■□□□□ 0.32
PSPC1-201ENST00000338910 SNX33Q8WV41 574 aa17.03■□□□□ 0.32
PSPC1-201ENST00000338910 NSMAFQ92636 917 aa17.03■□□□□ 0.32
PSPC1-201ENST00000338910 HOXB13Q92826 284 aaPredicted RBP17.03■□□□□ 0.32
PSPC1-201ENST00000338910 ZNF285Q96NJ3 590 aa17.03■□□□□ 0.32
PSPC1-201ENST00000338910 LMF2Q9BU23 707 aaKnown RBP17.03■□□□□ 0.32
PSPC1-201ENST00000338910 RASL12Q9NYN1 266 aa17.03■□□□□ 0.32
PSPC1-201ENST00000338910 DUX4Q9UBX2 424 aa17.03■□□□□ 0.32
PSPC1-201ENST00000338910 WDFY4Q6ZS81 3184 aa17.03■□□□□ 0.32
PSPC1-201ENST00000338910 CACNA1EQ15878 2313 aa17.03■□□□□ 0.32
PSPC1-201ENST00000338910 TMEM272A0A1B0GTI8 110 aa17.02■□□□□ 0.32
PSPC1-201ENST00000338910 FOSL1P15407 271 aa17.02■□□□□ 0.32
PSPC1-201ENST00000338910 CD1CP29017 333 aa17.02■□□□□ 0.32
PSPC1-201ENST00000338910 CD96P40200 585 aa17.02■□□□□ 0.32
PSPC1-201ENST00000338910 PSMB10P40306 273 aa17.02■□□□□ 0.32
PSPC1-201ENST00000338910 NAA10P41227 235 aaPredicted RBP17.02■□□□□ 0.32
PSPC1-201ENST00000338910 NPSR1Q6W5P4 371 aa17.02■□□□□ 0.32
PSPC1-201ENST00000338910 MAMSTRQ6ZN01 415 aa17.02■□□□□ 0.32
PSPC1-201ENST00000338910 SLC25A45Q8N413 288 aa17.02■□□□□ 0.32
PSPC1-201ENST00000338910 MIB2Q96AX9 1013 aa17.02■□□□□ 0.32
PSPC1-201ENST00000338910 ZDHHC12Q96GR4 267 aa17.02■□□□□ 0.32
PSPC1-201ENST00000338910 CNN2Q99439 309 aaKnown RBP17.02■□□□□ 0.32
PSPC1-201ENST00000338910 SEMA4CQ9C0C4 833 aa17.02■□□□□ 0.32
PSPC1-201ENST00000338910 POLE3Q9NRF9 147 aa17.02■□□□□ 0.32
PSPC1-201ENST00000338910 MED31Q9Y3C7 131 aa17.02■□□□□ 0.32
PSPC1-201ENST00000338910 CALCBP10092 127 aa17.02■□□□□ 0.32
PSPC1-201ENST00000338910 ADH7P40394 386 aa17.02■□□□□ 0.32
PSPC1-201ENST00000338910 MAGEB1P43366 347 aa17.02■□□□□ 0.32
PSPC1-201ENST00000338910 ARHGDIBP52566 201 aa17.02■□□□□ 0.32
PSPC1-201ENST00000338910 SLC35F2Q8IXU6 374 aa17.02■□□□□ 0.32
PSPC1-201ENST00000338910 POMGNT2Q8NAT1 580 aa17.02■□□□□ 0.32
PSPC1-201ENST00000338910 BPIFCQ8NFQ6 507 aa17.02■□□□□ 0.32
PSPC1-201ENST00000338910 MRI1Q9BV20 369 aa17.02■□□□□ 0.32
PSPC1-201ENST00000338910 TMEM27Q9HBJ8 222 aa17.02■□□□□ 0.32
PSPC1-201ENST00000338910 TP53BP1Q12888 1972 aaPredicted RBP17.02■□□□□ 0.31
PSPC1-201ENST00000338910 C19orf67A6NJJ6 358 aa17.01■□□□□ 0.31
PSPC1-201ENST00000338910 EIF4E2O60573 245 aaKnown RBP17.01■□□□□ 0.31
PSPC1-201ENST00000338910 GPR3P46089 330 aa17.01■□□□□ 0.31
PSPC1-201ENST00000338910 IGLV3-21P80748 117 aaPredicted RBP17.01■□□□□ 0.31
PSPC1-201ENST00000338910 SORDQ00796 357 aa17.01■□□□□ 0.31
PSPC1-201ENST00000338910 PRAMEF17Q5VTA0 474 aa17.01■□□□□ 0.31
PSPC1-201ENST00000338910 TTLL10Q6ZVT0 673 aa17.01■□□□□ 0.31
PSPC1-201ENST00000338910 OR4C16Q8NGL9 310 aa17.01■□□□□ 0.31
PSPC1-201ENST00000338910 C16orf52Q8NHV5 167 aa17.01■□□□□ 0.31
PSPC1-201ENST00000338910 RPS4Y2Q8TD47 263 aa17.01■□□□□ 0.31
PSPC1-201ENST00000338910 C15orf40Q8WUR7 153 aa17.01■□□□□ 0.31
PSPC1-201ENST00000338910 PMM1Q92871 262 aa17.01■□□□□ 0.31
PSPC1-201ENST00000338910 NCDNQ9UBB6 729 aa17.01■□□□□ 0.31
PSPC1-201ENST00000338910 NDRG3Q9UGV2 375 aa17.01■□□□□ 0.31
PSPC1-201ENST00000338910 IFNGP01579 166 aa17.01■□□□□ 0.31
PSPC1-201ENST00000338910 RLN1P04808 185 aa17.01■□□□□ 0.31
PSPC1-201ENST00000338910 UBBP0CG47 229 aa17.01■□□□□ 0.31
PSPC1-201ENST00000338910 UBCP0CG48 685 aaKnown RBP17.01■□□□□ 0.31
PSPC1-201ENST00000338910 OR1D4P47884 311 aa17.01■□□□□ 0.31
PSPC1-201ENST00000338910 RPS27AP62979 156 aaKnown RBP17.01■□□□□ 0.31
PSPC1-201ENST00000338910 UBA52P62987 128 aaKnown RBP17.01■□□□□ 0.31
PSPC1-201ENST00000338910 LGALS3BPQ08380 585 aa17.01■□□□□ 0.31
PSPC1-201ENST00000338910 GGTLC2Q14390 218 aa17.01■□□□□ 0.31
PSPC1-201ENST00000338910 ARHGAP11AQ6P4F7 1023 aa17.01■□□□□ 0.31
PSPC1-201ENST00000338910 MOB3CQ70IA8 216 aa17.01■□□□□ 0.31
PSPC1-201ENST00000338910 TMEM17Q86X19 198 aa17.01■□□□□ 0.31
PSPC1-201ENST00000338910 OR51L1Q8NGJ5 315 aa17.01■□□□□ 0.31
PSPC1-201ENST00000338910 OR10A5Q9H207 317 aa17.01■□□□□ 0.31
PSPC1-201ENST00000338910 TAS2R3Q9NYW6 316 aa17.01■□□□□ 0.31
PSPC1-201ENST00000338910 FLRT3Q9NZU0 649 aa17.01■□□□□ 0.31
PSPC1-201ENST00000338910 SEC16AO15027 2179 aa17.01■□□□□ 0.31
PSPC1-201ENST00000338910 H7C2Y5 167 aa17■□□□□ 0.31
PSPC1-201ENST00000338910 PDGFBP01127 241 aaPredicted RBP17■□□□□ 0.31
PSPC1-201ENST00000338910 CT45A8P0DMV1 189 aa17■□□□□ 0.31
PSPC1-201ENST00000338910 CT45A9P0DMV2 189 aa17■□□□□ 0.31
PSPC1-201ENST00000338910 MGMTP16455 207 aa17■□□□□ 0.31
PSPC1-201ENST00000338910 FAUP35544 74 aaKnown RBP17■□□□□ 0.31
PSPC1-201ENST00000338910 RPL35P42766 123 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms