RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 HCRTR1O43613 425 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 LILRB3O75022 631 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 TGM6O95932 706 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 COX15Q7KZN9 410 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 CBLN2Q8IUK8 224 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 CCDC36Q8IYA8 594 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 ZNF248Q8NDW4 579 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 TMED6Q8WW62 240 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 TAS2R4Q9NYW5 299 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 MPDZO75970 2070 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 GLCEO94923 617 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 AKR7A3O95154 331 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 GABRA1P14867 456 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 HTRA4P83105 476 aaPredicted RBP12.87□□□□□ -0.35
PCDH8-201ENST00000338862 ANKRD33Q7Z3H0 272 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 BPIFCQ8NFQ6 507 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 OR5D18Q8NGL1 313 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 ZNF417Q8TAU3 575 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 MIB2Q96AX9 1013 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 KLHL15Q96M94 604 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 DPYSL5Q9BPU6 564 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 TIMM29Q9BSF4 260 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 ACKR4Q9NPB9 350 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 GGT3PA6NGU5 568 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 C2orf74A8MZ97 194 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 ALOX12BO75342 701 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 OR4E1P0C645 316 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 RD3LP0DJH9 198 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 EXOSC6Q5RKV6 272 aaKnown RBP12.86□□□□□ -0.35
PCDH8-201ENST00000338862 CARD17Q5XLA6 110 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 ZNF626Q68DY1 528 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 USP53Q70EK8 1073 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 MRGPREQ86SM8 312 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 OR2G2Q8NGZ5 317 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 LHFPL5Q8TAF8 219 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 FGF11Q92914 225 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 HGDQ93099 445 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 MENTQ9BUN1 341 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 SERINC4A6NH21 518 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 H3BML4 177 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 KNG1P01042 644 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 ADRA2CP18825 462 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 S1PR1P21453 382 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 BAMBIQ13145 260 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 GPM6BQ13491 265 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 RIN1Q13671 783 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 PXKQ7Z7A4 578 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 CMIPQ8IY22 773 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 GVQW1Q8N7I0 195 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 ZSCAN1Q8NBB4 408 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 OR14A16Q8NHC5 309 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 KTI12Q96EK9 354 aaPredicted RBP12.86□□□□□ -0.35
PCDH8-201ENST00000338862 C10orf90Q96M02 699 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 OR2A5Q96R48 311 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 TEX101Q9BY14 249 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 KIR3DX1Q9H7L2 352 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 STEAP1Q9UHE8 339 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 KCNMB2Q9Y691 235 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 ANKRD20A5PA0PJZ0 165 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 PRR32B1ATL7 298 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 MPZL1O95297 269 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 IGKV1D-16P01601 117 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 ST6GAL1P15907 406 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 C1orf189Q5VU69 101 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 FCRL6Q6DN72 434 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 DPY19L2P2Q6ZN68 376 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 GPAT4Q86UL3 456 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 CDH26Q8IXH8 852 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 GABRG1Q8N1C3 465 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 GPR119Q8TDV5 335 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 PPP1R1CQ8WVI7 109 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 TGM7Q96PF1 710 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 OR11A1Q9GZK7 315 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 APMAPQ9HDC9 416 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 EPHA6Q9UF33 1036 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 MRM2Q9UI43 246 aaKnown RBP12.86□□□□□ -0.35
PCDH8-201ENST00000338862 ENTPD2Q9Y5L3 495 aa12.86□□□□□ -0.35
PCDH8-201ENST00000338862 NOTCH4Q99466 2003 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 C17orf105B2RV13 164 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 SLC33A1O00400 549 aaPredicted RBP12.85□□□□□ -0.35
PCDH8-201ENST00000338862 KLF4O43474 513 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 PMP2P02689 132 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 CD14P08571 375 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 NR0B1P51843 470 aaKnown RBP12.85□□□□□ -0.35
PCDH8-201ENST00000338862 FOXL2P58012 376 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 RPL18Q07020 188 aaKnown RBP12.85□□□□□ -0.35
PCDH8-201ENST00000338862 SWI5Q1ZZU3 235 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 Q6ZSR6 202 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 NPEPL1Q8NDH3 523 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 OR10H5Q8NGA6 315 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 C16orf52Q8NHV5 167 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 MAFIPQ8WZ33 124 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 AMELYQ99218 206 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 HDAC8Q9BY41 377 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 NKX6-2Q9C056 277 aaPredicted RBP12.85□□□□□ -0.35
PCDH8-201ENST00000338862 SELENOIQ9C0D9 397 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 CHMP1AQ9HD42 196 aaPredicted RBP12.85□□□□□ -0.35
PCDH8-201ENST00000338862 DNAJB12Q9NXW2 375 aaKnown RBP12.85□□□□□ -0.35
PCDH8-201ENST00000338862 PIPOXQ9P0Z9 390 aa12.85□□□□□ -0.35
PCDH8-201ENST00000338862 CPNE7Q9UBL6 633 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms