RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 ZNF615Q8N8J6 731 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 OR10K1Q8NGX5 313 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 BRIX1Q8TDN6 353 aaKnown RBP7.49□□□□□ -1.21
HPS4-201ENST00000336873 DAZLQ92904 295 aaKnown RBP7.49□□□□□ -1.21
HPS4-201ENST00000336873 ZDHHC12Q96GR4 267 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 RBM24Q9BX46 236 aaKnown RBP7.49□□□□□ -1.21
HPS4-201ENST00000336873 SELENOIQ9C0D9 397 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 ZNF576Q9H609 170 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 MCCC2Q9HCC0 563 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 PARPBPQ9NWS1 579 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 SLCO1C1Q9NYB5 712 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 TAS2R3Q9NYW6 316 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 KLHL13Q9P2N7 655 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 BAIAP2Q9UQB8 552 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 SPENQ96T58 3664 aaKnown RBP7.49□□□□□ -1.21
HPS4-201ENST00000336873 DSPPQ9NZW4 1301 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 MASP2O00187 686 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 BHLHE40O14503 412 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 SUSD5O60279 629 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 FRKP42685 505 aaPredicted RBP7.48□□□□□ -1.21
HPS4-201ENST00000336873 SELENOPP49908 381 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 NANOS3P60323 173 aaKnown RBP7.48□□□□□ -1.21
HPS4-201ENST00000336873 RPL22L1Q6P5R6 122 aaKnown RBP7.48□□□□□ -1.21
HPS4-201ENST00000336873 Q6ZTK2 550 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 STX12Q86Y82 276 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 RNF113BQ8IZP6 322 aaKnown RBP7.48□□□□□ -1.21
HPS4-201ENST00000336873 OR4K17Q8NGC6 315 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 ST8SIA2Q92186 375 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 SMIM19Q96E16 107 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 MS4A3Q96HJ5 214 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 KLHL15Q96M94 604 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 SFXN2Q96NB2 322 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 RBP7Q96R05 134 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 GDF15Q99988 308 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 KLHDC3Q9BQ90 382 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 SLA2Q9H6Q3 261 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 B9D1Q9UPM9 204 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 ENTPD2Q9Y5L3 495 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 FANCMQ8IYD8 2048 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 KIR2DS5A0A0G2JLQ3 304 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 A0A0G2JNG1 304 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 OR5K4A6NMS3 321 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 IFITM5A6NNB3 132 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 KIR2DS3K7RE56 304 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 IFNGR1P15260 489 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 DRD1P21728 446 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 CDAP32320 146 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 EEF1A1P68104 462 aaKnown RBP7.48□□□□□ -1.21
HPS4-201ENST00000336873 BAMBIQ13145 260 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 CBFBQ13951 182 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 KIR2DS5Q14953 304 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 INPP5JQ15735 1006 aaPredicted RBP7.48□□□□□ -1.21
HPS4-201ENST00000336873 PRTGQ2VWP7 1150 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 TMEM201Q5SNT2 666 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 RAET1LQ5VY80 246 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 WBP2NLQ6ICG8 309 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 KCTD18Q6PI47 426 aaPredicted RBP7.48□□□□□ -1.21
HPS4-201ENST00000336873 TMEM205Q6UW68 189 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 IDO2Q6ZQW0 420 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 DCXRQ7Z4W1 244 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 SLC51BQ86UW2 128 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 ZNF584Q8IVC4 421 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 ZNF680Q8NEM1 530 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 OR11H7Q8NGC8 314 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 FGGYQ96C11 551 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 C10orf90Q96M02 699 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 MENTQ9BUN1 341 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 LRRC61Q9BV99 259 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 PITHD1Q9GZP4 211 aaPredicted RBP7.48□□□□□ -1.21
HPS4-201ENST00000336873 MFFQ9GZY8 342 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 SLC6A15Q9H2J7 730 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 EMC7Q9NPA0 242 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 CYSLTR2Q9NS75 346 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 DNAJB12Q9NXW2 375 aaKnown RBP7.48□□□□□ -1.21
HPS4-201ENST00000336873 PRR13Q9NZ81 148 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 ELF5Q9UKW6 265 aaPredicted RBP7.48□□□□□ -1.21
HPS4-201ENST00000336873 PLCL2Q9UPR0 1127 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 DOCK10Q96BY6 2186 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 ZFHX2Q9C0A1 2572 aaPredicted RBP7.48□□□□□ -1.21
HPS4-201ENST00000336873 IGHV3-15A0A0B4J1V0 119 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 A0A0B4J2E0 115 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 A0A1B0GX12 115 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 C2CD4DB7Z1M9 353 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 PGCP20142 388 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 RBMS1P29558 406 aaKnown RBP7.48□□□□□ -1.21
HPS4-201ENST00000336873 SRYQ05066 204 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 ALKBH1Q13686 389 aaKnown RBP7.48□□□□□ -1.21
HPS4-201ENST00000336873 SLC9A3R2Q15599 337 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 RAB11BQ15907 218 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 Q499Y3 187 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 AWAT2Q6E213 333 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 OR52W1Q6IF63 320 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 STAC2Q6ZMT1 411 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 ZNF704Q6ZNC4 412 aaPredicted RBP7.48□□□□□ -1.21
HPS4-201ENST00000336873 MAMDC2Q7Z304 686 aaPredicted RBP7.48□□□□□ -1.21
HPS4-201ENST00000336873 TMEM17Q86X19 198 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 OR6V1Q8N148 313 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 SLC22A18ASQ8N1D0 253 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 NUDCD2Q8WVJ2 157 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 PPP1R3EQ9H7J1 279 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms