RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 HTR4Q13639 388 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 SLC17A1Q14916 467 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 OR2L13Q8N349 312 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 NXPE3Q969Y0 559 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 DUSP22Q9NRW4 184 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 CXXC1Q9P0U4 656 aaPredicted RBP12.07□□□□□ -0.48
HLCS-201ENST00000336648 A0A1B0GVG6 124 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 ADH4P08319 380 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 BMP1P13497 986 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 CLEC9AQ6UXN8 241 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 ZNF534Q76KX8 674 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 ISL2Q96A47 359 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 TMEM18Q96B42 140 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 FAM3DQ96BQ1 224 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 BARHL1Q9BZE3 327 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 LYRM4Q9HD34 91 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 OBP2AQ9NY56 170 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 DNMT3BQ9UBC3 853 aaKnown RBP12.07□□□□□ -0.48
HLCS-201ENST00000336648 A0A1B0GWA3 101 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 SOCS6O14544 535 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 RAB5AP20339 215 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 ADPRMQ3LIE5 342 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 H3F3CQ6NXT2 135 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 MRPL22Q9NWU5 206 aaKnown RBP12.07□□□□□ -0.48
HLCS-201ENST00000336648 CLCF1Q9UBD9 225 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 SIGLEC6O43699 453 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 CNMDO75829 334 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 RAF1P04049 648 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 GLB1P16278 677 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 MAOBP27338 520 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 CARD18P57730 90 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 TMEM52BQ4KMG9 183 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 ESPNLQ6ZVH7 1005 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 MEX3DQ86XN8 651 aaKnown RBP12.07□□□□□ -0.48
HLCS-201ENST00000336648 SLC35G3Q8N808 338 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 TMEM102Q8N9M5 508 aaPredicted RBP12.07□□□□□ -0.48
HLCS-201ENST00000336648 PKMYT1Q99640 499 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 OR51B6Q9H340 312 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 GAREM1Q9H706 876 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 KCND3Q9UK17 655 aa12.07□□□□□ -0.48
HLCS-201ENST00000336648 GPR55Q9Y2T6 319 aaPredicted RBP12.07□□□□□ -0.48
HLCS-201ENST00000336648 HSPB2A8KAH6 182 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 KLRC4-KLRK1H3BQV0 150 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 TCAPO15273 167 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 PVRP15151 417 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 SPI1P17947 270 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 NTF3P20783 257 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 DTYMKP23919 212 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 PSMB5P28074 263 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 SLC5A2P31639 672 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 RPS23P62266 143 aaKnown RBP12.06□□□□□ -0.48
HLCS-201ENST00000336648 HSPB2Q16082 182 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 IAH1Q2TAA2 248 aaPredicted RBP12.06□□□□□ -0.48
HLCS-201ENST00000336648 SYT9Q86SS6 491 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 OR5B3Q8NH48 314 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 C12orf57Q99622 126 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 KNDC1Q76NI1 1749 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 PRAMEF4O60810 478 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 NXPH2O95156 264 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 KIR2DL3P43628 341 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 CDK5Q00535 292 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 IHHQ14623 411 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 SLC48A1Q6P1K1 146 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 ZNF845Q96IR2 970 aaPredicted RBP12.06□□□□□ -0.48
HLCS-201ENST00000336648 ULBP3Q9BZM4 244 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 TM7SF3Q9NS93 570 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 NDRG4Q9ULP0 352 aaKnown RBP12.06□□□□□ -0.48
HLCS-201ENST00000336648 HRH3Q9Y5N1 445 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 TLCD2A6NGC4 264 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 TMEM127O75204 238 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 HEXAP06865 529 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 MPPED2Q15777 294 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 TMUB2Q71RG4 321 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 LAX1Q8IWV1 398 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 LRRC18Q8N456 261 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 M1APQ8TC57 530 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 C20orf24Q9BUV8 137 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 MED16Q9Y2X0 877 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 HS3ST3A1Q9Y663 406 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 ZFP92A6NM28 416 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 GSTP1P09211 210 aaKnown RBP12.06□□□□□ -0.48
HLCS-201ENST00000336648 MAP2K6P52564 334 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 H3F3AP84243 136 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 TMEM64Q6YI46 380 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 SLC35D2Q76EJ3 337 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 DOK3Q7L591 496 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 OR6K3Q8NGY3 331 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 PCNPQ8WW12 178 aaKnown RBP12.06□□□□□ -0.48
HLCS-201ENST00000336648 UTP4Q969X6 686 aaKnown RBP12.06□□□□□ -0.48
HLCS-201ENST00000336648 BCO1Q9HAY6 547 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 GALNT9Q9HCQ5 603 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 TMEM129A0AVI4 362 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 CSO75390 466 aaKnown RBP12.06□□□□□ -0.48
HLCS-201ENST00000336648 OR8U8P0C7N1 319 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 GPX2P18283 190 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 GCAP28676 217 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 UBE2G1P62253 170 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 RAB1AP62820 205 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 TBC1D28Q2M2D7 210 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 GDF7Q7Z4P5 450 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms