RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 CSNK1A1LQ8N752 337 aa21.41■■□□□ 1.02
TSKU-201ENST00000333090 VSTM2LQ96N03 204 aa21.41■■□□□ 1.02
TSKU-201ENST00000333090 LMF1Q96S06 567 aa21.41■■□□□ 1.02
TSKU-201ENST00000333090 NPIPB9F8W1W9 429 aa21.4■■□□□ 1.02
TSKU-201ENST00000333090 SDHAP31040 664 aa21.4■■□□□ 1.02
TSKU-201ENST00000333090 PDSS1Q5T2R2 415 aa21.4■■□□□ 1.02
TSKU-201ENST00000333090 ZNF75AQ96N20 296 aa21.4■■□□□ 1.02
TSKU-201ENST00000333090 PLA2G2FQ9BZM2 168 aa21.4■■□□□ 1.02
TSKU-201ENST00000333090 NKX6-2Q9C056 277 aaPredicted RBP21.4■■□□□ 1.02
TSKU-201ENST00000333090 HPF1Q9NWY4 346 aa21.4■■□□□ 1.02
TSKU-201ENST00000333090 FBXO4Q9UKT5 387 aa21.4■■□□□ 1.02
TSKU-201ENST00000333090 GTF2A1LQ9UNN4 478 aa21.4■■□□□ 1.02
TSKU-201ENST00000333090 OR10H1Q9Y4A9 318 aa21.4■■□□□ 1.02
TSKU-201ENST00000333090 KANTRA0A1W2PQU2 76 aa21.4■■□□□ 1.02
TSKU-201ENST00000333090 EIF4E2O60573 245 aaKnown RBP21.4■■□□□ 1.02
TSKU-201ENST00000333090 SRPX2O60687 465 aaPredicted RBP21.4■■□□□ 1.02
TSKU-201ENST00000333090 RAB3DO95716 219 aa21.4■■□□□ 1.02
TSKU-201ENST00000333090 CA3P07451 260 aa21.4■■□□□ 1.02
TSKU-201ENST00000333090 AGTR1P30556 359 aa21.4■■□□□ 1.02
TSKU-201ENST00000333090 RUNX3Q13761 415 aa21.4■■□□□ 1.02
TSKU-201ENST00000333090 RAB11BQ15907 218 aa21.4■■□□□ 1.02
TSKU-201ENST00000333090 ZNF776Q68DI1 518 aaPredicted RBP21.4■■□□□ 1.02
TSKU-201ENST00000333090 MCHR2Q969V1 340 aa21.4■■□□□ 1.02
TSKU-201ENST00000333090 DNTTIP1Q9H147 329 aa21.4■■□□□ 1.02
TSKU-201ENST00000333090 IGFLR1Q9H665 355 aa21.4■■□□□ 1.02
TSKU-201ENST00000333090 BARX1Q9HBU1 254 aaPredicted RBP21.4■■□□□ 1.02
TSKU-201ENST00000333090 Q9N2J8 555 aa21.4■■□□□ 1.02
TSKU-201ENST00000333090 GRHPRQ9UBQ7 328 aa21.4■■□□□ 1.02
TSKU-201ENST00000333090 UPB1Q9UBR1 384 aa21.4■■□□□ 1.02
TSKU-201ENST00000333090 HIF3AQ9Y2N7 669 aa21.4■■□□□ 1.02
TSKU-201ENST00000333090 A0A0D9SG52 128 aa21.39■■□□□ 1.02
TSKU-201ENST00000333090 OR5H14A6NHG9 310 aa21.39■■□□□ 1.02
TSKU-201ENST00000333090 ATXN7L3Q14CW9 347 aaPredicted RBP21.39■■□□□ 1.02
TSKU-201ENST00000333090 ZNF74Q16587 644 aa21.39■■□□□ 1.02
TSKU-201ENST00000333090 TMEM17Q86X19 198 aa21.39■■□□□ 1.02
TSKU-201ENST00000333090 PLPP7Q8NBV4 271 aa21.39■■□□□ 1.02
TSKU-201ENST00000333090 OR9A4Q8NGU2 314 aa21.39■■□□□ 1.02
TSKU-201ENST00000333090 AMELYQ99218 206 aa21.39■■□□□ 1.02
TSKU-201ENST00000333090 POTEKPQ9BYX7 375 aa21.39■■□□□ 1.02
TSKU-201ENST00000333090 ALX4Q9H161 411 aaPredicted RBP21.39■■□□□ 1.02
TSKU-201ENST00000333090 C1orf198Q9H425 327 aa21.39■■□□□ 1.02
TSKU-201ENST00000333090 ARID1BQ8NFD5 2236 aaPredicted RBP21.39■■□□□ 1.01
TSKU-201ENST00000333090 CACNA1IQ9P0X4 2223 aa21.39■■□□□ 1.01
TSKU-201ENST00000333090 PRKNO60260 465 aaPredicted RBP21.39■■□□□ 1.01
TSKU-201ENST00000333090 ALOX5APP20292 161 aa21.39■■□□□ 1.01
TSKU-201ENST00000333090 ACTBP60709 375 aa21.39■■□□□ 1.01
TSKU-201ENST00000333090 ACTG1P63261 375 aa21.39■■□□□ 1.01
TSKU-201ENST00000333090 WDR38Q5JTN6 314 aa21.39■■□□□ 1.01
TSKU-201ENST00000333090 OR1J2Q8NGS2 313 aa21.39■■□□□ 1.01
TSKU-201ENST00000333090 GPX8Q8TED1 209 aa21.39■■□□□ 1.01
TSKU-201ENST00000333090 ASB13Q8WXK3 278 aa21.39■■□□□ 1.01
TSKU-201ENST00000333090 ATOH1Q92858 354 aaPredicted RBP21.39■■□□□ 1.01
TSKU-201ENST00000333090 TINAGL1Q9GZM7 467 aaPredicted RBP21.39■■□□□ 1.01
TSKU-201ENST00000333090 LOC100289279A0A1B0GTE1 492 aa21.38■■□□□ 1.01
TSKU-201ENST00000333090 AMY2AP04746 511 aa21.38■■□□□ 1.01
TSKU-201ENST00000333090 KIR3DL2P43630 455 aa21.38■■□□□ 1.01
TSKU-201ENST00000333090 ZNF627Q7L945 461 aa21.38■■□□□ 1.01
TSKU-201ENST00000333090 GALNT16Q8N428 558 aa21.38■■□□□ 1.01
TSKU-201ENST00000333090 TMEM185AQ8NFB2 350 aa21.38■■□□□ 1.01
TSKU-201ENST00000333090 CCDC3Q9BQI4 270 aa21.38■■□□□ 1.01
TSKU-201ENST00000333090 PDCD10Q9BUL8 212 aa21.38■■□□□ 1.01
TSKU-201ENST00000333090 ZNF471Q9BX82 626 aaPredicted RBP21.38■■□□□ 1.01
TSKU-201ENST00000333090 PRELID3BQ9Y3B1 194 aa21.38■■□□□ 1.01
TSKU-201ENST00000333090 HCRTR1O43613 425 aa21.38■■□□□ 1.01
TSKU-201ENST00000333090 PLRG1O43660 514 aaKnown RBP21.38■■□□□ 1.01
TSKU-201ENST00000333090 CNR1P21554 472 aa21.38■■□□□ 1.01
TSKU-201ENST00000333090 RAB38P57729 211 aa21.38■■□□□ 1.01
TSKU-201ENST00000333090 TAS2R19P59542 299 aa21.38■■□□□ 1.01
TSKU-201ENST00000333090 DMWDQ09019 674 aa21.38■■□□□ 1.01
TSKU-201ENST00000333090 RASGEF1BQ0VAM2 473 aa21.38■■□□□ 1.01
TSKU-201ENST00000333090 TAF13Q15543 124 aa21.38■■□□□ 1.01
TSKU-201ENST00000333090 JMJD6Q6NYC1 403 aaPredicted RBP21.38■■□□□ 1.01
TSKU-201ENST00000333090 MOB3CQ70IA8 216 aa21.38■■□□□ 1.01
TSKU-201ENST00000333090 PATE1Q8WXA2 126 aa21.38■■□□□ 1.01
TSKU-201ENST00000333090 C4orf45Q96LM5 186 aa21.38■■□□□ 1.01
TSKU-201ENST00000333090 G6PC3Q9BUM1 346 aa21.38■■□□□ 1.01
TSKU-201ENST00000333090 FBXO9Q9UK97 447 aaPredicted RBP21.38■■□□□ 1.01
TSKU-201ENST00000333090 ZNF175Q9Y473 711 aa21.38■■□□□ 1.01
TSKU-201ENST00000333090 OR2W5A6NFC9 320 aa21.37■■□□□ 1.01
TSKU-201ENST00000333090 MESTQ5EB52 335 aa21.37■■□□□ 1.01
TSKU-201ENST00000333090 LRRC75AQ8NAA5 344 aa21.37■■□□□ 1.01
TSKU-201ENST00000333090 BAHD1Q8TBE0 780 aaPredicted RBP21.37■■□□□ 1.01
TSKU-201ENST00000333090 DCBLD2Q96PD2 775 aa21.37■■□□□ 1.01
TSKU-201ENST00000333090 PTDSS2Q9BVG9 487 aa21.37■■□□□ 1.01
TSKU-201ENST00000333090 SLC19A3Q9BZV2 496 aa21.37■■□□□ 1.01
TSKU-201ENST00000333090 SYT4Q9H2B2 425 aa21.37■■□□□ 1.01
TSKU-201ENST00000333090 GPN3Q9UHW5 284 aaPredicted RBP21.37■■□□□ 1.01
TSKU-201ENST00000333090 KCNG2Q9UJ96 466 aa21.37■■□□□ 1.01
TSKU-201ENST00000333090 MPTX1A8MV57 137 aa21.37■■□□□ 1.01
TSKU-201ENST00000333090 CCSO14618 274 aa21.37■■□□□ 1.01
TSKU-201ENST00000333090 FOXS1O43638 330 aa21.37■■□□□ 1.01
TSKU-201ENST00000333090 NR0B2Q15466 257 aa21.37■■□□□ 1.01
TSKU-201ENST00000333090 DEFB110Q30KQ9 67 aa21.37■■□□□ 1.01
TSKU-201ENST00000333090 DNAJA3Q96EY1 480 aa21.37■■□□□ 1.01
TSKU-201ENST00000333090 SEC22AQ96IW7 307 aa21.37■■□□□ 1.01
TSKU-201ENST00000333090 LPAR4Q99677 370 aa21.37■■□□□ 1.01
TSKU-201ENST00000333090 RPP25Q9BUL9 199 aaKnown RBP21.37■■□□□ 1.01
TSKU-201ENST00000333090 ZMAT3Q9HA38 289 aaKnown RBP21.37■■□□□ 1.01
TSKU-201ENST00000333090 SLC17A2O00624 439 aa21.36■■□□□ 1.01
TSKU-201ENST00000333090 CTSBP07858 339 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms