RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 RXFP3Q9NSD7 469 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 WBP1LQ9NX94 342 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 DPP7Q9UHL4 492 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 C4orf47A7E2U8 309 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 APEHP13798 732 aaKnown RBP11.59□□□□□ -0.55
CCDC60-201ENST00000327554 RCC1P18754 421 aaPredicted RBP11.59□□□□□ -0.55
CCDC60-201ENST00000327554 F2RL1P55085 397 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 PNLIPRP3Q17RR3 467 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 RNF212Q495C1 297 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 GXYLT1Q4G148 440 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 FIGNL1Q6PIW4 674 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 DRAM2Q6UX65 266 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 ETV3LQ6ZN32 361 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 LYG2Q86SG7 212 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 ZAR1Q86SH2 424 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 OR4K17Q8NGC6 315 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 ARRDC3Q96B67 414 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 FAM3DQ96BQ1 224 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 COX14Q96I36 57 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 CLCC1Q96S66 551 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 ALG12Q9BV10 488 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 ATG5Q9H1Y0 275 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 SEC61A2Q9H9S3 476 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 RPH3AQ9Y2J0 694 aaPredicted RBP11.59□□□□□ -0.55
CCDC60-201ENST00000327554 PCDHGA1Q9Y5H4 931 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 TTLL8A6PVC2 850 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 C1QTNF3-AMACRE9PGA6 284 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 IL2RAP01589 272 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 IGHV2-5P01817 119 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 FBXO45P0C2W1 286 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 SELPP16109 830 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 RPL4P36578 427 aaKnown RBP11.59□□□□□ -0.55
CCDC60-201ENST00000327554 TSFMP43897 325 aaKnown RBP11.59□□□□□ -0.55
CCDC60-201ENST00000327554 BTN3A2P78410 334 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 DMWDQ09019 674 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 AIMP2Q13155 320 aaKnown RBP11.59□□□□□ -0.55
CCDC60-201ENST00000327554 PPP1R1AQ13522 171 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 ALG10BQ5I7T1 473 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 FHL5Q5TD97 284 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 LINC00114Q6XXX2 140 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 DPY19L2P2Q6ZN68 376 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 SLC29A4Q7RTT9 530 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 SLC25A42Q86VD7 318 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 BPIFB2Q8N4F0 458 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 MITD1Q8WV92 249 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 MCHR2Q969V1 340 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 ZNF285Q96NJ3 590 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 LAT2Q9GZY6 243 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 ADAP2Q9NPF8 381 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 PRMT8Q9NR22 394 aaPredicted RBP11.59□□□□□ -0.55
CCDC60-201ENST00000327554 SLC17A5Q9NRA2 495 aa11.59□□□□□ -0.55
CCDC60-201ENST00000327554 A0A0B4J2A0 478 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 LOC100289279A0A1B0GTE1 492 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 NARSO43776 548 aaKnown RBP11.58□□□□□ -0.56
CCDC60-201ENST00000327554 CLN5O75503 358 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 DCNP07585 359 aaKnown RBP11.58□□□□□ -0.56
CCDC60-201ENST00000327554 SFTA3P0C7M3 94 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 SLC35G4P0C7Q5 338 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 ZNF28P17035 718 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 AVPR2P30518 371 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 ACAA2P42765 397 aaKnown RBP11.58□□□□□ -0.56
CCDC60-201ENST00000327554 PPICP45877 212 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 CAV2P51636 162 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 ELAVL1Q15717 326 aaKnown RBP11.58□□□□□ -0.56
CCDC60-201ENST00000327554 SCGB2B2Q4G0G5 96 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 FAM166AQ6J272 317 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 RHOUQ7L0Q8 258 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 SLC16A9Q7RTY1 509 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 LILRB2Q8N423 598 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 COX18Q8N8Q8 333 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 OR2G2Q8NGZ5 317 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 NUDCD2Q8WVJ2 157 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 FOXRED1Q96CU9 486 aaPredicted RBP11.58□□□□□ -0.56
CCDC60-201ENST00000327554 RRNAD1Q96FB5 475 aaKnown RBP11.58□□□□□ -0.56
CCDC60-201ENST00000327554 NKX3-1Q99801 234 aaPredicted RBP11.58□□□□□ -0.56
CCDC60-201ENST00000327554 ULBP3Q9BZM4 244 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 CST11Q9H112 138 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 LPAR3Q9UBY5 353 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 SHPKQ9UHJ6 478 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 FBXL21Q9UKT6 434 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 TRBV6-7A0A0A0MS04 114 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 WRBO00258 174 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 SLC17A2O00624 439 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 ARPC3O15145 178 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 TXNL1O43396 289 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 DOK2O60496 412 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 CRHP06850 196 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 OR8U8P0C7N1 319 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 RAB28P51157 221 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 RAB11BQ15907 218 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 LY6G5CQ5SRR4 150 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 ZNF561Q8N587 486 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 MRGPRFQ96AM1 343 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 MRPL38Q96DV4 380 aaKnown RBP11.58□□□□□ -0.56
CCDC60-201ENST00000327554 ADAD1Q96M93 576 aaKnown RBP11.58□□□□□ -0.56
CCDC60-201ENST00000327554 INSM2Q96T92 566 aaPredicted RBP11.58□□□□□ -0.56
CCDC60-201ENST00000327554 TEX101Q9BY14 249 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 SPHK2Q9NRA0 654 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 MSRAQ9UJ68 235 aa11.58□□□□□ -0.56
CCDC60-201ENST00000327554 C19orf53Q9UNZ5 99 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms