RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 OR2T4Q8NH00 348 aa13.51□□□□□ -0.25
PRPF3-201ENST00000324862 MRPL22Q9NWU5 206 aaKnown RBP13.51□□□□□ -0.25
PRPF3-201ENST00000324862 PRSS50Q9UI38 385 aa13.51□□□□□ -0.25
PRPF3-201ENST00000324862 MAGEA13PA6NCF6 341 aa13.5□□□□□ -0.25
PRPF3-201ENST00000324862 TRIM64A6NGJ6 449 aa13.5□□□□□ -0.25
PRPF3-201ENST00000324862 MAGEB4O15481 346 aaPredicted RBP13.5□□□□□ -0.25
PRPF3-201ENST00000324862 GLCEO94923 617 aa13.5□□□□□ -0.25
PRPF3-201ENST00000324862 HLA-DQA2P01906 255 aa13.5□□□□□ -0.25
PRPF3-201ENST00000324862 ATP6V1E1P36543 226 aa13.5□□□□□ -0.25
PRPF3-201ENST00000324862 CD79BP40259 229 aa13.5□□□□□ -0.25
PRPF3-201ENST00000324862 TEKQ02763 1124 aa13.5□□□□□ -0.25
PRPF3-201ENST00000324862 KCTD21Q4G0X4 260 aa13.5□□□□□ -0.25
PRPF3-201ENST00000324862 NSUN5P2Q63ZY6 315 aa13.5□□□□□ -0.25
PRPF3-201ENST00000324862 CNEP1R1Q8N9A8 125 aa13.5□□□□□ -0.25
PRPF3-201ENST00000324862 RFKQ969G6 155 aa13.5□□□□□ -0.25
PRPF3-201ENST00000324862 ADAD1Q96M93 576 aaKnown RBP13.5□□□□□ -0.25
PRPF3-201ENST00000324862 RBP7Q96R05 134 aa13.5□□□□□ -0.25
PRPF3-201ENST00000324862 CRLF2Q9HC73 371 aa13.5□□□□□ -0.25
PRPF3-201ENST00000324862 SLC7A10Q9NS82 523 aa13.5□□□□□ -0.25
PRPF3-201ENST00000324862 TPRKBQ9Y3C4 175 aa13.5□□□□□ -0.25
PRPF3-201ENST00000324862 SLC22A31A6NKX4 558 aa13.5□□□□□ -0.25
PRPF3-201ENST00000324862 FADS2O95864 444 aaKnown RBP13.5□□□□□ -0.25
PRPF3-201ENST00000324862 PRB1P04280 392 aa13.5□□□□□ -0.25
PRPF3-201ENST00000324862 ERI1Q8IV48 349 aaKnown RBP13.5□□□□□ -0.25
PRPF3-201ENST00000324862 C20orf196Q8IYI0 205 aa13.5□□□□□ -0.25
PRPF3-201ENST00000324862 PHF3Q92576 2039 aaKnown RBP13.5□□□□□ -0.25
PRPF3-201ENST00000324862 TMEM54Q969K7 222 aa13.5□□□□□ -0.25
PRPF3-201ENST00000324862 RBM24Q9BX46 236 aaKnown RBP13.5□□□□□ -0.25
PRPF3-201ENST00000324862 FKBP7Q9Y680 259 aa13.5□□□□□ -0.25
PRPF3-201ENST00000324862 A0A1W2PPL8 197 aa13.49□□□□□ -0.25
PRPF3-201ENST00000324862 FIGNL2A6NMB9 653 aa13.49□□□□□ -0.25
PRPF3-201ENST00000324862 SBK2P0C263 348 aa13.49□□□□□ -0.25
PRPF3-201ENST00000324862 FAM205BPQ63HN1 556 aa13.49□□□□□ -0.25
PRPF3-201ENST00000324862 LHFPL3Q86UP9 236 aa13.49□□□□□ -0.25
PRPF3-201ENST00000324862 STX19Q8N4C7 294 aa13.49□□□□□ -0.25
PRPF3-201ENST00000324862 SIGLEC11Q96RL6 698 aa13.49□□□□□ -0.25
PRPF3-201ENST00000324862 ULBP2Q9BZM5 246 aa13.49□□□□□ -0.25
PRPF3-201ENST00000324862 SEC61A2Q9H9S3 476 aa13.49□□□□□ -0.25
PRPF3-201ENST00000324862 EMC3Q9P0I2 261 aa13.49□□□□□ -0.25
PRPF3-201ENST00000324862 SHANK1Q9Y566 2161 aa13.49□□□□□ -0.25
PRPF3-201ENST00000324862 ZNF724A8MTY0 619 aa13.49□□□□□ -0.25
PRPF3-201ENST00000324862 GPR171O14626 319 aa13.49□□□□□ -0.25
PRPF3-201ENST00000324862 CDK1P06493 297 aa13.49□□□□□ -0.25
PRPF3-201ENST00000324862 FCGR2AP12318 317 aa13.49□□□□□ -0.25
PRPF3-201ENST00000324862 EDN3P14138 238 aa13.49□□□□□ -0.25
PRPF3-201ENST00000324862 KIR2DL2P43627 348 aaPredicted RBP13.49□□□□□ -0.25
PRPF3-201ENST00000324862 MRPL49Q13405 166 aaKnown RBP13.49□□□□□ -0.25
PRPF3-201ENST00000324862 THEM4Q5T1C6 240 aa13.49□□□□□ -0.25
PRPF3-201ENST00000324862 C1orf185Q5T7R7 199 aa13.49□□□□□ -0.25
PRPF3-201ENST00000324862 TMEM154Q6P9G4 183 aa13.49□□□□□ -0.25
PRPF3-201ENST00000324862 SLC25A47Q6Q0C1 308 aa13.49□□□□□ -0.25
PRPF3-201ENST00000324862 SSX6Q7RTT6 188 aa13.49□□□□□ -0.25
PRPF3-201ENST00000324862 SPARTQ8N0X7 666 aa13.49□□□□□ -0.25
PRPF3-201ENST00000324862 WNT2BQ93097 391 aa13.49□□□□□ -0.25
PRPF3-201ENST00000324862 GMPPAQ96IJ6 420 aaPredicted RBP13.49□□□□□ -0.25
PRPF3-201ENST00000324862 EMC7Q9NPA0 242 aa13.49□□□□□ -0.25
PRPF3-201ENST00000324862 WARS2Q9UGM6 360 aaKnown RBP13.49□□□□□ -0.25
PRPF3-201ENST00000324862 BLOC1S6Q9UL45 172 aa13.49□□□□□ -0.25
PRPF3-201ENST00000324862 COPS3Q9UNS2 423 aa13.49□□□□□ -0.25
PRPF3-201ENST00000324862 RCE1Q9Y256 329 aa13.49□□□□□ -0.25
PRPF3-201ENST00000324862 KLHDC2Q9Y2U9 406 aa13.49□□□□□ -0.25
PRPF3-201ENST00000324862 UGT2A1Q9Y4X1 527 aa13.49□□□□□ -0.25
PRPF3-201ENST00000324862 PSMD9O00233 223 aa13.48□□□□□ -0.25
PRPF3-201ENST00000324862 PRRG2O14669 202 aa13.48□□□□□ -0.25
PRPF3-201ENST00000324862 RGS10O43665 173 aa13.48□□□□□ -0.25
PRPF3-201ENST00000324862 WDR1O75083 606 aa13.48□□□□□ -0.25
PRPF3-201ENST00000324862 SLC43A1O75387 559 aa13.48□□□□□ -0.25
PRPF3-201ENST00000324862 ETV1P50549 477 aa13.48□□□□□ -0.25
PRPF3-201ENST00000324862 PER3P56645 1201 aa13.48□□□□□ -0.25
PRPF3-201ENST00000324862 TIGD4Q8IY51 512 aa13.48□□□□□ -0.25
PRPF3-201ENST00000324862 OR10H4Q8NGA5 316 aa13.48□□□□□ -0.25
PRPF3-201ENST00000324862 TMEM45BQ96B21 275 aa13.48□□□□□ -0.25
PRPF3-201ENST00000324862 SNX18Q96RF0 628 aa13.48□□□□□ -0.25
PRPF3-201ENST00000324862 ZNF835Q9Y2P0 537 aa13.48□□□□□ -0.25
PRPF3-201ENST00000324862 CD8B2A6NJW9 211 aa13.48□□□□□ -0.25
PRPF3-201ENST00000324862 C12orf71A8MTZ7 269 aa13.48□□□□□ -0.25
PRPF3-201ENST00000324862 PRR32B1ATL7 298 aa13.48□□□□□ -0.25
PRPF3-201ENST00000324862 J3QRE1 110 aa13.48□□□□□ -0.25
PRPF3-201ENST00000324862 SS18L1O75177 396 aaPredicted RBP13.48□□□□□ -0.25
PRPF3-201ENST00000324862 CRABP1P29762 137 aa13.48□□□□□ -0.25
PRPF3-201ENST00000324862 GUSBP1Q15486 140 aa13.48□□□□□ -0.25
PRPF3-201ENST00000324862 FAM214BQ7L5A3 538 aa13.48□□□□□ -0.25
PRPF3-201ENST00000324862 DPY19L4Q7Z388 723 aa13.48□□□□□ -0.25
PRPF3-201ENST00000324862 LINC00346Q8IVM7 164 aa13.48□□□□□ -0.25
PRPF3-201ENST00000324862 UBE2J2Q8N2K1 259 aa13.48□□□□□ -0.25
PRPF3-201ENST00000324862 APH1AQ96BI3 265 aa13.48□□□□□ -0.25
PRPF3-201ENST00000324862 TTYH2Q9BSA4 534 aa13.48□□□□□ -0.25
PRPF3-201ENST00000324862 YTHDF1Q9BYJ9 559 aaKnown RBP13.48□□□□□ -0.25
PRPF3-201ENST00000324862 RACGAP1Q9H0H5 632 aa13.48□□□□□ -0.25
PRPF3-201ENST00000324862 SLCO5A1Q9H2Y9 848 aa13.48□□□□□ -0.25
PRPF3-201ENST00000324862 MBD3L4A6NDZ8 208 aaPredicted RBP13.47□□□□□ -0.25
PRPF3-201ENST00000324862 MBD3L3A6NE82 208 aaPredicted RBP13.47□□□□□ -0.25
PRPF3-201ENST00000324862 EFCAB10A6NFE3 127 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 MBD3L5A6NJ08 208 aaPredicted RBP13.47□□□□□ -0.25
PRPF3-201ENST00000324862 SNTNA6NMZ2 147 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 KHDRBS3O75525 346 aaKnown RBP13.47□□□□□ -0.25
PRPF3-201ENST00000324862 TNFSF13O75888 250 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 WNT11O96014 354 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 GAAP10253 952 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 GABRA1P14867 456 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms