RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 HACD4Q5VWC8 232 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 CARD17Q5XLA6 110 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 OR52W1Q6IF63 320 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 PAPD4Q6PIY7 484 aaKnown RBP6.89□□□□□ -1.31
CDHR3-201ENST00000317716 LCTLQ6UWM7 567 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 MARCH3Q86UD3 253 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 COMTD1Q86VU5 262 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 OR4K17Q8NGC6 315 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 SFT2D1Q8WV19 159 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 FAM3DQ96BQ1 224 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 AKR1E2Q96JD6 320 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 FAM71F1Q96KD3 344 aaPredicted RBP6.89□□□□□ -1.31
CDHR3-201ENST00000317716 ZFP57Q9NU63 452 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 MRPS33Q9Y291 106 aaKnown RBP6.89□□□□□ -1.31
CDHR3-201ENST00000317716 RHBDD3Q9Y3P4 386 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 C7orf66A4D0T2 115 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 SULT1C2O00338 296 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 MAN2B1O00754 1011 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 TNRC18O15417 2968 aaPredicted RBP6.89□□□□□ -1.31
CDHR3-201ENST00000317716 SLC16A7O60669 478 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 ARG1P05089 322 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 BSGP35613 385 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 ARRB1P49407 418 aaPredicted RBP6.89□□□□□ -1.31
CDHR3-201ENST00000317716 CAV2P51636 162 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 C1orf61Q13536 156 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 DHCR24Q15392 516 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 Q499Y3 187 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 SLC22A6Q4U2R8 563 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 TMEM255AQ5JRV8 349 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 AWAT2Q6E213 333 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 TANGO2Q6ICL3 276 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 PTCRAQ6ISU1 281 aaPredicted RBP6.89□□□□□ -1.31
CDHR3-201ENST00000317716 SLC35F3Q8IY50 421 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 TCEAL8Q8IYN2 117 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 ZNF619Q8N2I2 560 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 OR52E1Q8NGJ3 308 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 PTP4A1Q93096 173 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 TSACCQ96A04 125 aaPredicted RBP6.89□□□□□ -1.31
CDHR3-201ENST00000317716 DTD2Q96FN9 168 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 SLC41A2Q96JW4 573 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 INSM2Q96T92 566 aaPredicted RBP6.89□□□□□ -1.31
CDHR3-201ENST00000317716 GAREM1Q9H706 876 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 UNKLQ9H9P5 680 aaKnown RBP6.89□□□□□ -1.31
CDHR3-201ENST00000317716 SPACA1Q9HBV2 294 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 ISYNA1Q9NPH2 558 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 CARNS1A5YM72 827 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 RDH16O75452 317 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 NFATC1O95644 943 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 ERCC1P07992 297 aaPredicted RBP6.89□□□□□ -1.31
CDHR3-201ENST00000317716 OR2T7P0C7T2 308 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 G0S2P27469 103 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 SERPINF1P36955 418 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 CSNK1G2P78368 415 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 RPL13AP3Q6NVV1 102 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 CLEC9AQ6UXN8 241 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 NR2C2APQ86WQ0 139 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 LINC00346Q8IVM7 164 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 PUSL1Q8N0Z8 303 aaKnown RBP6.89□□□□□ -1.31
CDHR3-201ENST00000317716 OR52R1Q8NGF1 315 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 OR2AJ1Q8NGZ0 328 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 OR2T27Q8NH04 317 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 OR14A16Q8NHC5 309 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 RGP1Q92546 391 aaPredicted RBP6.89□□□□□ -1.31
CDHR3-201ENST00000317716 SMIM19Q96E16 107 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 HHIPQ96QV1 700 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 TBL1XR1Q9BZK7 514 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 NDRG3Q9UGV2 375 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 OPN4Q9UHM6 478 aa6.89□□□□□ -1.31
CDHR3-201ENST00000317716 TMEM189-UBE2V1I3L0A0 370 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 SDCBPO00560 298 aaPredicted RBP6.88□□□□□ -1.31
CDHR3-201ENST00000317716 SCDO00767 359 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 SRPX2O60687 465 aaPredicted RBP6.88□□□□□ -1.31
CDHR3-201ENST00000317716 SEMA7AO75326 666 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 NXPH3O95157 252 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 ZFPL1O95159 310 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 SEMG1P04279 462 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 ZNF44P15621 663 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 HSD11B1P28845 292 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 ZP1P60852 638 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 CSNK2A1P68400 391 aaPredicted RBP6.88□□□□□ -1.31
CDHR3-201ENST00000317716 NKX6-1P78426 367 aaPredicted RBP6.88□□□□□ -1.31
CDHR3-201ENST00000317716 S100A12P80511 92 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 PRDX1Q06830 199 aaKnown RBP6.88□□□□□ -1.31
CDHR3-201ENST00000317716 RHEBQ15382 184 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 MEP1BQ16820 701 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 ZNF770Q6IQ21 691 aaPredicted RBP6.88□□□□□ -1.31
CDHR3-201ENST00000317716 ERN2Q76MJ5 926 aaKnown RBP6.88□□□□□ -1.31
CDHR3-201ENST00000317716 PLPP6Q8IY26 295 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 GABRG1Q8N1C3 465 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 CSNK2A3Q8NEV1 391 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 VN1R2Q8NFZ6 395 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 OR11G2Q8NGC1 345 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 OR51Q1Q8NH59 317 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 ZNF417Q8TAU3 575 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 RNF141Q8WVD5 230 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 ATOH1Q92858 354 aaPredicted RBP6.88□□□□□ -1.31
CDHR3-201ENST00000317716 HLA-CQ95604 372 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 CMBLQ96DG6 245 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 ZDHHC5Q9C0B5 715 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 PRSS16Q9NQE7 514 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms