RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 FANCFQ9NPI8 374 aa16.46■□□□□ 0.22
CCDC43-201ENST00000315286 EXTL2Q9UBQ6 330 aa16.46■□□□□ 0.22
CCDC43-201ENST00000315286 AHCTF1Q8WYP5 2266 aa16.45■□□□□ 0.22
CCDC43-201ENST00000315286 A0A1W2PNU3 283 aaPredicted RBP16.45■□□□□ 0.22
CCDC43-201ENST00000315286 C9orf172C9J069 976 aa16.45■□□□□ 0.22
CCDC43-201ENST00000315286 G3V3Y1 287 aa16.45■□□□□ 0.22
CCDC43-201ENST00000315286 SEC14L5O43304 696 aa16.45■□□□□ 0.22
CCDC43-201ENST00000315286 FZD7O75084 574 aa16.45■□□□□ 0.22
CCDC43-201ENST00000315286 EIF4EP06730 217 aaKnown RBP16.45■□□□□ 0.22
CCDC43-201ENST00000315286 EPXP11678 715 aa16.45■□□□□ 0.22
CCDC43-201ENST00000315286 ATF1P18846 271 aa16.45■□□□□ 0.22
CCDC43-201ENST00000315286 EIF1P41567 113 aaKnown RBP16.45■□□□□ 0.22
CCDC43-201ENST00000315286 RFX2P48378 723 aa16.45■□□□□ 0.22
CCDC43-201ENST00000315286 GLO1Q04760 184 aa16.45■□□□□ 0.22
CCDC43-201ENST00000315286 Q0VFX4 171 aa16.45■□□□□ 0.22
CCDC43-201ENST00000315286 ZNF468Q5VIY5 522 aaPredicted RBP16.45■□□□□ 0.22
CCDC43-201ENST00000315286 NHLRC1Q6VVB1 395 aa16.45■□□□□ 0.22
CCDC43-201ENST00000315286 SPATC1Q76KD6 591 aa16.45■□□□□ 0.22
CCDC43-201ENST00000315286 Q8N402 240 aa16.45■□□□□ 0.22
CCDC43-201ENST00000315286 TRMT10AQ8TBZ6 339 aaKnown RBP16.45■□□□□ 0.22
CCDC43-201ENST00000315286 PAQR8Q8TEZ7 354 aa16.45■□□□□ 0.22
CCDC43-201ENST00000315286 GNRHR2Q96P88 292 aa16.45■□□□□ 0.22
CCDC43-201ENST00000315286 DERL3Q96Q80 235 aa16.45■□□□□ 0.22
CCDC43-201ENST00000315286 OR8B4Q96RC9 309 aa16.45■□□□□ 0.22
CCDC43-201ENST00000315286 EMC6Q9BV81 110 aa16.45■□□□□ 0.22
CCDC43-201ENST00000315286 MFRPQ9BY79 579 aa16.45■□□□□ 0.22
CCDC43-201ENST00000315286 SPRY4Q9C004 299 aa16.45■□□□□ 0.22
CCDC43-201ENST00000315286 ELOVL3Q9HB03 270 aa16.45■□□□□ 0.22
CCDC43-201ENST00000315286 SH2D2AQ9NP31 389 aa16.45■□□□□ 0.22
CCDC43-201ENST00000315286 CYSLTR2Q9NS75 346 aa16.45■□□□□ 0.22
CCDC43-201ENST00000315286 FARSAQ9Y285 508 aaKnown RBP16.45■□□□□ 0.22
CCDC43-201ENST00000315286 FREM2Q5SZK8 3169 aa16.45■□□□□ 0.22
CCDC43-201ENST00000315286 IGKV1D-43A0A0B4J1Z2 117 aa16.44■□□□□ 0.22
CCDC43-201ENST00000315286 A0A1W2PNV4 684 aa16.44■□□□□ 0.22
CCDC43-201ENST00000315286 OR4C45A6NMZ5 311 aa16.44■□□□□ 0.22
CCDC43-201ENST00000315286 PTBP1P26599 531 aaKnown RBP eCLIP16.44■□□□□ 0.22
CCDC43-201ENST00000315286 ADH6P28332 368 aa16.44■□□□□ 0.22
CCDC43-201ENST00000315286 SFTPDP35247 375 aa16.44■□□□□ 0.22
CCDC43-201ENST00000315286 SLC22A10Q63ZE4 541 aa16.44■□□□□ 0.22
CCDC43-201ENST00000315286 SLC18B1Q6NT16 456 aa16.44■□□□□ 0.22
CCDC43-201ENST00000315286 LRRC28Q86X40 367 aaPredicted RBP16.44■□□□□ 0.22
CCDC43-201ENST00000315286 ARMC10Q8N2F6 343 aa16.44■□□□□ 0.22
CCDC43-201ENST00000315286 DTX3Q8N9I9 347 aa16.44■□□□□ 0.22
CCDC43-201ENST00000315286 NEDD4LQ96PU5 975 aa16.44■□□□□ 0.22
CCDC43-201ENST00000315286 DDA1Q9BW61 102 aa16.44■□□□□ 0.22
CCDC43-201ENST00000315286 HPF1Q9NWY4 346 aa16.44■□□□□ 0.22
CCDC43-201ENST00000315286 RPH3AQ9Y2J0 694 aaPredicted RBP16.44■□□□□ 0.22
CCDC43-201ENST00000315286 A0A0B4J203 849 aa16.44■□□□□ 0.22
CCDC43-201ENST00000315286 CENPBD1B2RD01 187 aa16.44■□□□□ 0.22
CCDC43-201ENST00000315286 PTGS2P35354 604 aa16.44■□□□□ 0.22
CCDC43-201ENST00000315286 P2RY4P51582 365 aa16.44■□□□□ 0.22
CCDC43-201ENST00000315286 BIDP55957 195 aa16.44■□□□□ 0.22
CCDC43-201ENST00000315286 OR2B6P58173 313 aa16.44■□□□□ 0.22
CCDC43-201ENST00000315286 CD300CQ08708 224 aa16.44■□□□□ 0.22
CCDC43-201ENST00000315286 RIN1Q13671 783 aa16.44■□□□□ 0.22
CCDC43-201ENST00000315286 SLC17A1Q14916 467 aa16.44■□□□□ 0.22
CCDC43-201ENST00000315286 TMEM176BQ3YBM2 270 aaPredicted RBP16.44■□□□□ 0.22
CCDC43-201ENST00000315286 PRSS35Q8N3Z0 413 aa16.44■□□□□ 0.22
CCDC43-201ENST00000315286 CELF2-AS1Q8N7Q2 184 aa16.44■□□□□ 0.22
CCDC43-201ENST00000315286 OR4M1Q8NGD0 313 aa16.44■□□□□ 0.22
CCDC43-201ENST00000315286 OR5H6Q8NGV6 325 aa16.44■□□□□ 0.22
CCDC43-201ENST00000315286 ASB17Q8WXJ9 295 aa16.44■□□□□ 0.22
CCDC43-201ENST00000315286 ZBTB8AQ96BR9 441 aa16.44■□□□□ 0.22
CCDC43-201ENST00000315286 NTNG2Q96CW9 530 aa16.44■□□□□ 0.22
CCDC43-201ENST00000315286 SLC25A18Q9H1K4 315 aa16.44■□□□□ 0.22
CCDC43-201ENST00000315286 A0A1B0GVC2 190 aa16.43■□□□□ 0.22
CCDC43-201ENST00000315286 A6NIN4 97 aa16.43■□□□□ 0.22
CCDC43-201ENST00000315286 RAB40ALP0C0E4 278 aa16.43■□□□□ 0.22
CCDC43-201ENST00000315286 NPR2P20594 1047 aa16.43■□□□□ 0.22
CCDC43-201ENST00000315286 SELENBP1Q13228 472 aa16.43■□□□□ 0.22
CCDC43-201ENST00000315286 ASAH1Q13510 395 aa16.43■□□□□ 0.22
CCDC43-201ENST00000315286 SSPNQ14714 243 aa16.43■□□□□ 0.22
CCDC43-201ENST00000315286 CDCP2Q5VXM1 449 aa16.43■□□□□ 0.22
CCDC43-201ENST00000315286 MDGA2Q7Z553 956 aa16.43■□□□□ 0.22
CCDC43-201ENST00000315286 ZNF679Q8IYX0 411 aa16.43■□□□□ 0.22
CCDC43-201ENST00000315286 RDH10Q8IZV5 341 aa16.43■□□□□ 0.22
CCDC43-201ENST00000315286 SLC26A10Q8NG04 563 aa16.43■□□□□ 0.22
CCDC43-201ENST00000315286 LIN37Q96GY3 246 aaPredicted RBP16.43■□□□□ 0.22
CCDC43-201ENST00000315286 GFI1Q99684 422 aa16.43■□□□□ 0.22
CCDC43-201ENST00000315286 CNTRLQ7Z7A1 2325 aa16.43■□□□□ 0.22
CCDC43-201ENST00000315286 A0A0G2JMP0 313 aa16.42■□□□□ 0.22
CCDC43-201ENST00000315286 A0A0X1KG70 313 aa16.42■□□□□ 0.22
CCDC43-201ENST00000315286 HSPB2A8KAH6 182 aa16.42■□□□□ 0.22
CCDC43-201ENST00000315286 ZNF814B7Z6K7 855 aa16.42■□□□□ 0.22
CCDC43-201ENST00000315286 SNRPBP14678 240 aaKnown RBP16.42■□□□□ 0.22
CCDC43-201ENST00000315286 DPP4P27487 766 aa16.42■□□□□ 0.22
CCDC43-201ENST00000315286 EIF2B1Q14232 305 aaKnown RBP16.42■□□□□ 0.22
CCDC43-201ENST00000315286 HSPB2Q16082 182 aa16.42■□□□□ 0.22
CCDC43-201ENST00000315286 Q499Y3 187 aa16.42■□□□□ 0.22
CCDC43-201ENST00000315286 FAM205BPQ63HN1 556 aa16.42■□□□□ 0.22
CCDC43-201ENST00000315286 DNM1P34Q6PK57 102 aa16.42■□□□□ 0.22
CCDC43-201ENST00000315286 DND1Q8IYX4 353 aaKnown RBP16.42■□□□□ 0.22
CCDC43-201ENST00000315286 OR4M2Q8NGB6 313 aa16.42■□□□□ 0.22
CCDC43-201ENST00000315286 SLC25A43Q8WUT9 341 aaPredicted RBP16.42■□□□□ 0.22
CCDC43-201ENST00000315286 JSRP1Q96MG2 331 aaPredicted RBP16.42■□□□□ 0.22
CCDC43-201ENST00000315286 DCBLD2Q96PD2 775 aa16.42■□□□□ 0.22
CCDC43-201ENST00000315286 ABHD6Q9BV23 337 aa16.42■□□□□ 0.22
CCDC43-201ENST00000315286 ANKRD10Q9NXR5 420 aa16.42■□□□□ 0.22
CCDC43-201ENST00000315286 FOXJ2Q9P0K8 574 aa16.42■□□□□ 0.22
CCDC43-201ENST00000315286 CACNA1HO95180 2353 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms