RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 FAM168AQ92567 244 aa14.08□□□□□ -0.16
LSM1-201ENST00000311351 NMD3Q96D46 503 aaKnown RBP14.08□□□□□ -0.16
LSM1-201ENST00000311351 TSPAN32Q96QS1 320 aa14.08□□□□□ -0.16
LSM1-201ENST00000311351 KCNK17Q96T54 332 aa14.08□□□□□ -0.16
LSM1-201ENST00000311351 NMNAT1Q9HAN9 279 aaPredicted RBP14.08□□□□□ -0.16
LSM1-201ENST00000311351 TAGLN3Q9UI15 199 aa14.08□□□□□ -0.16
LSM1-201ENST00000311351 UGT2A1Q9Y4X1 527 aa14.08□□□□□ -0.16
LSM1-201ENST00000311351 FKBP7Q9Y680 259 aa14.08□□□□□ -0.16
LSM1-201ENST00000311351 YLPM1P49750 1951 aaKnown RBP14.08□□□□□ -0.16
LSM1-201ENST00000311351 CENPBD1B2RD01 187 aa14.07□□□□□ -0.16
LSM1-201ENST00000311351 CDC42EP2O14613 210 aa14.07□□□□□ -0.16
LSM1-201ENST00000311351 DIRAS1O95057 198 aa14.07□□□□□ -0.16
LSM1-201ENST00000311351 FARS2O95363 451 aaKnown RBP14.07□□□□□ -0.16
LSM1-201ENST00000311351 IGHMP01871 453 aa14.07□□□□□ -0.16
LSM1-201ENST00000311351 NR4A1P22736 598 aa14.07□□□□□ -0.16
LSM1-201ENST00000311351 MSX2P35548 267 aaPredicted RBP14.07□□□□□ -0.16
LSM1-201ENST00000311351 PPOXP50336 477 aa14.07□□□□□ -0.16
LSM1-201ENST00000311351 ZNF133P52736 654 aaPredicted RBP14.07□□□□□ -0.16
LSM1-201ENST00000311351 CTXN1P60606 82 aa14.07□□□□□ -0.16
LSM1-201ENST00000311351 RPL27P61353 136 aaKnown RBP14.07□□□□□ -0.16
LSM1-201ENST00000311351 VLDLRP98155 873 aa14.07□□□□□ -0.16
LSM1-201ENST00000311351 FGD3Q5JSP0 725 aa14.07□□□□□ -0.16
LSM1-201ENST00000311351 SLC16A14Q7RTX9 510 aa14.07□□□□□ -0.16
LSM1-201ENST00000311351 OAFQ86UD1 273 aa14.07□□□□□ -0.16
LSM1-201ENST00000311351 CYP4Z1Q86W10 505 aa14.07□□□□□ -0.16
LSM1-201ENST00000311351 PGAM4Q8N0Y7 254 aa14.07□□□□□ -0.16
LSM1-201ENST00000311351 LRRC18Q8N456 261 aa14.07□□□□□ -0.16
LSM1-201ENST00000311351 PAQR4Q8N4S7 273 aaPredicted RBP14.07□□□□□ -0.16
LSM1-201ENST00000311351 SLC7A13Q8TCU3 470 aa14.07□□□□□ -0.16
LSM1-201ENST00000311351 C10orf105Q8TEF2 133 aa14.07□□□□□ -0.16
LSM1-201ENST00000311351 NSMAFQ92636 917 aa14.07□□□□□ -0.16
LSM1-201ENST00000311351 LRRC37BQ96QE4 947 aa14.07□□□□□ -0.16
LSM1-201ENST00000311351 TNFRSF13CQ96RJ3 184 aa14.07□□□□□ -0.16
LSM1-201ENST00000311351 DENND2DQ9H6A0 471 aaPredicted RBP14.07□□□□□ -0.16
LSM1-201ENST00000311351 RNF121Q9H920 327 aa14.07□□□□□ -0.16
LSM1-201ENST00000311351 DCAF13Q9NV06 445 aaKnown RBP14.07□□□□□ -0.16
LSM1-201ENST00000311351 NDUFAF4Q9P032 175 aa14.07□□□□□ -0.16
LSM1-201ENST00000311351 STX18Q9P2W9 335 aaKnown RBP14.07□□□□□ -0.16
LSM1-201ENST00000311351 ZNF346Q9UL40 294 aaKnown RBP14.07□□□□□ -0.16
LSM1-201ENST00000311351 TMEM129A0AVI4 362 aa14.06□□□□□ -0.16
LSM1-201ENST00000311351 SH3PXD2BA1X283 911 aa14.06□□□□□ -0.16
LSM1-201ENST00000311351 HTR3EA5X5Y0 456 aa14.06□□□□□ -0.16
LSM1-201ENST00000311351 DCTN3O75935 186 aa14.06□□□□□ -0.16
LSM1-201ENST00000311351 F12P00748 615 aaPredicted RBP14.06□□□□□ -0.16
LSM1-201ENST00000311351 SERPINA5P05154 406 aa14.06□□□□□ -0.16
LSM1-201ENST00000311351 H1F0P07305 194 aaKnown RBP14.06□□□□□ -0.16
LSM1-201ENST00000311351 IGFBP1P08833 259 aaPredicted RBP14.06□□□□□ -0.16
LSM1-201ENST00000311351 CCL2P13500 99 aa14.06□□□□□ -0.16
LSM1-201ENST00000311351 ZNF26P17031 533 aaPredicted RBP14.06□□□□□ -0.16
LSM1-201ENST00000311351 DSCR9P59020 149 aa14.06□□□□□ -0.16
LSM1-201ENST00000311351 PODNL1Q6PEZ8 512 aa14.06□□□□□ -0.16
LSM1-201ENST00000311351 RNF113BQ8IZP6 322 aaKnown RBP14.06□□□□□ -0.16
LSM1-201ENST00000311351 ZCCHC24Q8N2G6 241 aaKnown RBP14.06□□□□□ -0.16
LSM1-201ENST00000311351 ZNF519Q8TB69 540 aa14.06□□□□□ -0.16
LSM1-201ENST00000311351 NABP1Q96AH0 204 aa14.06□□□□□ -0.16
LSM1-201ENST00000311351 FAM46AQ96IP4 442 aaKnown RBP14.06□□□□□ -0.16
LSM1-201ENST00000311351 C7orf34Q96L11 122 aa14.06□□□□□ -0.16
LSM1-201ENST00000311351 DOK1Q99704 481 aa14.06□□□□□ -0.16
LSM1-201ENST00000311351 MRPL37Q9BZE1 423 aaKnown RBP14.06□□□□□ -0.16
LSM1-201ENST00000311351 ANKRD19PQ9H560 264 aa14.06□□□□□ -0.16
LSM1-201ENST00000311351 DYNLRB1Q9NP97 96 aa14.06□□□□□ -0.16
LSM1-201ENST00000311351 FBXL3Q9UKT7 428 aa14.06□□□□□ -0.16
LSM1-201ENST00000311351 FZR1Q9UM11 496 aa14.06□□□□□ -0.16
LSM1-201ENST00000311351 SAMD4AQ9UPU9 718 aaKnown RBP14.06□□□□□ -0.16
LSM1-201ENST00000311351 CMAHPQ9Y471 501 aa14.06□□□□□ -0.16
LSM1-201ENST00000311351 TRBV4-1A0A0J9YWV2 114 aa14.05□□□□□ -0.16
LSM1-201ENST00000311351 H7C1C5 153 aa14.05□□□□□ -0.16
LSM1-201ENST00000311351 ARPC2O15144 300 aa14.05□□□□□ -0.16
LSM1-201ENST00000311351 ENTPD5O75356 428 aa14.05□□□□□ -0.16
LSM1-201ENST00000311351 GMNNO75496 209 aa14.05□□□□□ -0.16
LSM1-201ENST00000311351 HSD17B1P14061 328 aa14.05□□□□□ -0.16
LSM1-201ENST00000311351 SLC25A16P16260 332 aa14.05□□□□□ -0.16
LSM1-201ENST00000311351 SLC9A3P48764 834 aa14.05□□□□□ -0.16
LSM1-201ENST00000311351 LCN6P62502 163 aa14.05□□□□□ -0.16
LSM1-201ENST00000311351 ERVK-25P63136 954 aa14.05□□□□□ -0.16
LSM1-201ENST00000311351 PPP2R2BQ00005 443 aa14.05□□□□□ -0.16
LSM1-201ENST00000311351 GALK2Q01415 458 aa14.05□□□□□ -0.16
LSM1-201ENST00000311351 TAF11Q15544 211 aa14.05□□□□□ -0.16
LSM1-201ENST00000311351 CARTPTQ16568 116 aa14.05□□□□□ -0.16
LSM1-201ENST00000311351 FXNQ16595 210 aa14.05□□□□□ -0.16
LSM1-201ENST00000311351 SLC36A2Q495M3 483 aa14.05□□□□□ -0.16
LSM1-201ENST00000311351 NRN1LQ496H8 165 aa14.05□□□□□ -0.16
LSM1-201ENST00000311351 GKAP1Q5VSY0 366 aaPredicted RBP14.05□□□□□ -0.16
LSM1-201ENST00000311351 TMEM53Q6P2H8 277 aa14.05□□□□□ -0.16
LSM1-201ENST00000311351 SLC25A47Q6Q0C1 308 aa14.05□□□□□ -0.16
LSM1-201ENST00000311351 SLC30A7Q8NEW0 376 aa14.05□□□□□ -0.16
LSM1-201ENST00000311351 MRPL24Q96A35 216 aaKnown RBP14.05□□□□□ -0.16
LSM1-201ENST00000311351 CDRT15Q96T59 188 aa14.05□□□□□ -0.16
LSM1-201ENST00000311351 SYT3Q9BQG1 590 aa14.05□□□□□ -0.16
LSM1-201ENST00000311351 ALG12Q9BV10 488 aa14.05□□□□□ -0.16
LSM1-201ENST00000311351 OR51B6Q9H340 312 aa14.05□□□□□ -0.16
LSM1-201ENST00000311351 SMURF2Q9HAU4 748 aa14.05□□□□□ -0.16
LSM1-201ENST00000311351 CD300AQ9UGN4 299 aa14.05□□□□□ -0.16
LSM1-201ENST00000311351 MAGEL2Q9UJ55 1249 aa14.05□□□□□ -0.16
LSM1-201ENST00000311351 ADAM18Q9Y3Q7 739 aa14.05□□□□□ -0.16
LSM1-201ENST00000311351 FAM32AQ9Y421 112 aaKnown RBP14.05□□□□□ -0.16
LSM1-201ENST00000311351 A0A1W2PRQ8 180 aa14.04□□□□□ -0.16
LSM1-201ENST00000311351 SEMG1P04279 462 aa14.04□□□□□ -0.16
LSM1-201ENST00000311351 MMP7P09237 267 aaPredicted RBP14.04□□□□□ -0.16
LSM1-201ENST00000311351 CSF3P09919 207 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms