RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 WNT2BQ93097 391 aa10.14□□□□□ -0.79
PTPN7-201ENST00000309017 KIAA1549LQ6ZVL6 1849 aa10.14□□□□□ -0.79
PTPN7-201ENST00000309017 C11orf98E9PRG8 122 aa10.14□□□□□ -0.79
PTPN7-201ENST00000309017 ZNF432O94892 652 aa10.14□□□□□ -0.79
PTPN7-201ENST00000309017 CD2P06729 351 aa10.14□□□□□ -0.79
PTPN7-201ENST00000309017 MAOBP27338 520 aa10.14□□□□□ -0.79
PTPN7-201ENST00000309017 SEC13P55735 322 aa10.14□□□□□ -0.79
PTPN7-201ENST00000309017 CDNFQ49AH0 187 aa10.14□□□□□ -0.79
PTPN7-201ENST00000309017 SLC43A2Q8N370 569 aa10.14□□□□□ -0.79
PTPN7-201ENST00000309017 ZNF563Q8TA94 476 aa10.14□□□□□ -0.79
PTPN7-201ENST00000309017 PPP1R1CQ8WVI7 109 aa10.14□□□□□ -0.79
PTPN7-201ENST00000309017 CPNE2Q96FN4 548 aaPredicted RBP10.14□□□□□ -0.79
PTPN7-201ENST00000309017 SPACA7Q96KW9 195 aa10.14□□□□□ -0.79
PTPN7-201ENST00000309017 ZFYVE21Q9BQ24 234 aa10.14□□□□□ -0.79
PTPN7-201ENST00000309017 UTP23Q9BRU9 249 aaKnown RBP10.14□□□□□ -0.79
PTPN7-201ENST00000309017 SLC17A9Q9BYT1 436 aa10.14□□□□□ -0.79
PTPN7-201ENST00000309017 PIGMQ9H3S5 423 aa10.14□□□□□ -0.79
PTPN7-201ENST00000309017 MBD2Q9UBB5 411 aa10.14□□□□□ -0.79
PTPN7-201ENST00000309017 PURGQ9UJV8 347 aaKnown RBP10.14□□□□□ -0.79
PTPN7-201ENST00000309017 A0A087WV62 115 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 ATG12O94817 140 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 EML2O95834 649 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 CD1AP06126 327 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 NOGQ13253 232 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 CSRP2Q16527 193 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 PRICKLE4Q2TBC4 344 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 ZCCHC12Q6PEW1 402 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 RHOUQ7L0Q8 258 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 ZFP82Q8N141 532 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 PHOSPHO1Q8TCT1 267 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 TSACCQ96A04 125 aaPredicted RBP10.13□□□□□ -0.79
PTPN7-201ENST00000309017 ELF4Q99607 663 aaPredicted RBP10.13□□□□□ -0.79
PTPN7-201ENST00000309017 APOOQ9BUR5 198 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 SYT4Q9H2B2 425 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 LRIT1Q9P2V4 623 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 CUL9Q8IWT3 2517 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 CCDC85CA6NKD9 419 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 TMEM212A6NML5 194 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 ZNF705EA8MWA4 302 aaPredicted RBP10.13□□□□□ -0.79
PTPN7-201ENST00000309017 XKRYO14609 159 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 CD14P08571 375 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 BDKRB2P30411 391 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 SRSF5Q13243 272 aaKnown RBP10.13□□□□□ -0.79
PTPN7-201ENST00000309017 DEFB110Q30KQ9 67 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 SLC39A5Q6ZMH5 540 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 RAB11FIP2Q7L804 512 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 LRRTM1Q86UE6 522 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 ZNF584Q8IVC4 421 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 EIF4E3Q8N5X7 224 aaKnown RBP10.13□□□□□ -0.79
PTPN7-201ENST00000309017 CCL4L1Q8NHW4 92 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 OR2A5Q96R48 311 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 TMEM231Q9H6L2 316 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 WDR76Q9H967 626 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 ELOVL3Q9HB03 270 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 DHDHQ9UQ10 334 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 ERVK-19Q9WJR5 959 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 TTC28Q96AY4 2481 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 LOC100289279A0A1B0GTE1 492 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 FITM1A5D6W6 292 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 ARPC3O15145 178 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 NDUFA2O43678 99 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 SLC25A12O75746 678 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 FARS2O95363 451 aaKnown RBP10.13□□□□□ -0.79
PTPN7-201ENST00000309017 NUDT14O95848 222 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 PLGP00747 810 aaPredicted RBP10.13□□□□□ -0.79
PTPN7-201ENST00000309017 ITGA5P08648 1049 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 SPARCP09486 303 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 MST1P26927 711 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 RPS21P63220 83 aaKnown RBP10.13□□□□□ -0.79
PTPN7-201ENST00000309017 CXADRP78310 365 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 PLAURQ03405 335 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 OR7A5Q15622 319 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 KLHL26Q53HC5 615 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 PAN3Q58A45 887 aaKnown RBP10.13□□□□□ -0.79
PTPN7-201ENST00000309017 NKAIN2Q5VXU1 208 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 OR10K2Q6IF99 312 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 C3orf33Q6P1S2 294 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 GALNT16Q8N428 558 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 INTS14Q96SY0 518 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 CGGBP1Q9UFW8 167 aaPredicted RBP10.13□□□□□ -0.79
PTPN7-201ENST00000309017 SLC22A13Q9Y226 551 aa10.13□□□□□ -0.79
PTPN7-201ENST00000309017 NOTCH4Q99466 2003 aa10.12□□□□□ -0.79
PTPN7-201ENST00000309017 TRAV14DV4A0A0A6YYC5 116 aa10.12□□□□□ -0.79
PTPN7-201ENST00000309017 BCL2L11O43521 198 aa10.12□□□□□ -0.79
PTPN7-201ENST00000309017 OR2F2O95006 317 aa10.12□□□□□ -0.79
PTPN7-201ENST00000309017 KAT7O95251 611 aa10.12□□□□□ -0.79
PTPN7-201ENST00000309017 WNT11O96014 354 aa10.12□□□□□ -0.79
PTPN7-201ENST00000309017 AKR1C4P17516 323 aa10.12□□□□□ -0.79
PTPN7-201ENST00000309017 DNASE1L1P49184 302 aa10.12□□□□□ -0.79
PTPN7-201ENST00000309017 ATP1B3P54709 279 aa10.12□□□□□ -0.79
PTPN7-201ENST00000309017 DHRS2Q13268 280 aa10.12□□□□□ -0.79
PTPN7-201ENST00000309017 OR2F1Q13607 317 aa10.12□□□□□ -0.79
PTPN7-201ENST00000309017 FHL5Q5TD97 284 aa10.12□□□□□ -0.79
PTPN7-201ENST00000309017 C11orf87Q6NUJ2 197 aa10.12□□□□□ -0.79
PTPN7-201ENST00000309017 CSNK1A1LQ8N752 337 aa10.12□□□□□ -0.79
PTPN7-201ENST00000309017 SLC25A21Q9BQT8 299 aaPredicted RBP10.12□□□□□ -0.79
PTPN7-201ENST00000309017 TMEM106CQ9BVX2 250 aa10.12□□□□□ -0.79
PTPN7-201ENST00000309017 WDR13Q9H1Z4 485 aa10.12□□□□□ -0.79
PTPN7-201ENST00000309017 KIR3DX1Q9H7L2 352 aa10.12□□□□□ -0.79
PTPN7-201ENST00000309017 NDRG3Q9UGV2 375 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms