RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 MRPL24Q96A35 216 aaKnown RBP17.07■□□□□ 0.32
PDZRN3-202ENST00000308537 C7orf34Q96L11 122 aa17.07■□□□□ 0.32
PDZRN3-202ENST00000308537 FAM107BQ9H098 131 aa17.07■□□□□ 0.32
PDZRN3-202ENST00000308537 TRAV27A0A087WT01 109 aa17.06■□□□□ 0.32
PDZRN3-202ENST00000308537 KIAA1324LA8MWY0 1029 aaPredicted RBP17.06■□□□□ 0.32
PDZRN3-202ENST00000308537 CDC42EP2O14613 210 aa17.06■□□□□ 0.32
PDZRN3-202ENST00000308537 TLX2O43763 284 aaPredicted RBP17.06■□□□□ 0.32
PDZRN3-202ENST00000308537 CLRN1P58418 232 aa17.06■□□□□ 0.32
PDZRN3-202ENST00000308537 GNGT1P63211 74 aa17.06■□□□□ 0.32
PDZRN3-202ENST00000308537 TRAM2Q15035 370 aa17.06■□□□□ 0.32
PDZRN3-202ENST00000308537 ALG10Q5BKT4 473 aa17.06■□□□□ 0.32
PDZRN3-202ENST00000308537 SLC25A47Q6Q0C1 308 aa17.06■□□□□ 0.32
PDZRN3-202ENST00000308537 FAM156AQ8NDB6 213 aa17.06■□□□□ 0.32
PDZRN3-202ENST00000308537 ZNF519Q8TB69 540 aa17.06■□□□□ 0.32
PDZRN3-202ENST00000308537 ACOT11Q8WXI4 607 aaPredicted RBP17.06■□□□□ 0.32
PDZRN3-202ENST00000308537 CMTM5Q96DZ9 223 aa17.06■□□□□ 0.32
PDZRN3-202ENST00000308537 VRK1Q99986 396 aaPredicted RBP17.06■□□□□ 0.32
PDZRN3-202ENST00000308537 KCTD14Q9BQ13 255 aaPredicted RBP17.06■□□□□ 0.32
PDZRN3-202ENST00000308537 SMURF2Q9HAU4 748 aa17.06■□□□□ 0.32
PDZRN3-202ENST00000308537 MYEF2Q9P2K5 600 aaKnown RBP17.06■□□□□ 0.32
PDZRN3-202ENST00000308537 ENPP4Q9Y6X5 453 aa17.06■□□□□ 0.32
PDZRN3-202ENST00000308537 FBN1P35555 2871 aaKnown RBP17.05■□□□□ 0.32
PDZRN3-202ENST00000308537 MCIDASD6RGH6 385 aa17.05■□□□□ 0.32
PDZRN3-202ENST00000308537 MGRN1O60291 552 aa17.05■□□□□ 0.32
PDZRN3-202ENST00000308537 RAB36O95755 333 aa17.05■□□□□ 0.32
PDZRN3-202ENST00000308537 EVX1P49640 407 aa17.05■□□□□ 0.32
PDZRN3-202ENST00000308537 MRPS34P82930 218 aaKnown RBP17.05■□□□□ 0.32
PDZRN3-202ENST00000308537 C6orf52Q5T4I8 152 aa17.05■□□□□ 0.32
PDZRN3-202ENST00000308537 MBOAT2Q6ZWT7 520 aa17.05■□□□□ 0.32
PDZRN3-202ENST00000308537 PIGWQ7Z7B1 504 aa17.05■□□□□ 0.32
PDZRN3-202ENST00000308537 IGFN1Q86VF2 1251 aa17.05■□□□□ 0.32
PDZRN3-202ENST00000308537 LRP11Q86VZ4 500 aa17.05■□□□□ 0.32
PDZRN3-202ENST00000308537 RNF113BQ8IZP6 322 aaKnown RBP17.05■□□□□ 0.32
PDZRN3-202ENST00000308537 OR13C2Q8NGS9 318 aa17.05■□□□□ 0.32
PDZRN3-202ENST00000308537 SLC7A13Q8TCU3 470 aa17.05■□□□□ 0.32
PDZRN3-202ENST00000308537 TSPAN32Q96QS1 320 aa17.05■□□□□ 0.32
PDZRN3-202ENST00000308537 FUZQ9BT04 418 aa17.05■□□□□ 0.32
PDZRN3-202ENST00000308537 FNDC11Q9BVV2 318 aa17.05■□□□□ 0.32
PDZRN3-202ENST00000308537 NMNAT1Q9HAN9 279 aaPredicted RBP17.05■□□□□ 0.32
PDZRN3-202ENST00000308537 SPAG4Q9NPE6 437 aa17.05■□□□□ 0.32
PDZRN3-202ENST00000308537 NDUFAF4Q9P032 175 aa17.05■□□□□ 0.32
PDZRN3-202ENST00000308537 EGFL7Q9UHF1 273 aa17.05■□□□□ 0.32
PDZRN3-202ENST00000308537 ZNF346Q9UL40 294 aaKnown RBP17.05■□□□□ 0.32
PDZRN3-202ENST00000308537 FKBP7Q9Y680 259 aa17.05■□□□□ 0.32
PDZRN3-202ENST00000308537 NDUFAB1O14561 156 aa17.04■□□□□ 0.32
PDZRN3-202ENST00000308537 SEMG1P04279 462 aa17.04■□□□□ 0.32
PDZRN3-202ENST00000308537 CDAP32320 146 aa17.04■□□□□ 0.32
PDZRN3-202ENST00000308537 NR4A2P43354 598 aa17.04■□□□□ 0.32
PDZRN3-202ENST00000308537 PDLIM4P50479 330 aa17.04■□□□□ 0.32
PDZRN3-202ENST00000308537 RPL27P61353 136 aaKnown RBP17.04■□□□□ 0.32
PDZRN3-202ENST00000308537 PPP2R2BQ00005 443 aa17.04■□□□□ 0.32
PDZRN3-202ENST00000308537 FOXL2NBQ6ZUU3 175 aa17.04■□□□□ 0.32
PDZRN3-202ENST00000308537 TMPRSS11FQ6ZWK6 438 aa17.04■□□□□ 0.32
PDZRN3-202ENST00000308537 RNF148Q8N7C7 305 aa17.04■□□□□ 0.32
PDZRN3-202ENST00000308537 OR51A7Q8NH64 312 aa17.04■□□□□ 0.32
PDZRN3-202ENST00000308537 DHRS1Q96LJ7 313 aa17.04■□□□□ 0.32
PDZRN3-202ENST00000308537 FOXN4Q96NZ1 517 aa17.04■□□□□ 0.32
PDZRN3-202ENST00000308537 ANKRD19PQ9H560 264 aa17.04■□□□□ 0.32
PDZRN3-202ENST00000308537 DCAF13Q9NV06 445 aaKnown RBP17.04■□□□□ 0.32
PDZRN3-202ENST00000308537 FBXL3Q9UKT7 428 aa17.04■□□□□ 0.32
PDZRN3-202ENST00000308537 CMAHPQ9Y471 501 aa17.04■□□□□ 0.32
PDZRN3-202ENST00000308537 MXRA5Q9NR99 2828 aa17.03■□□□□ 0.32
PDZRN3-202ENST00000308537 IGHV4-61A0A0C4DH41 118 aa17.03■□□□□ 0.32
PDZRN3-202ENST00000308537 NDUFS8O00217 210 aa17.03■□□□□ 0.32
PDZRN3-202ENST00000308537 GSTA4O15217 222 aa17.03■□□□□ 0.32
PDZRN3-202ENST00000308537 SNAP29O95721 258 aa17.03■□□□□ 0.32
PDZRN3-202ENST00000308537 IGHV4-31P0DP07 118 aa17.03■□□□□ 0.32
PDZRN3-202ENST00000308537 CCL2P13500 99 aa17.03■□□□□ 0.32
PDZRN3-202ENST00000308537 LIMS1P48059 325 aa17.03■□□□□ 0.32
PDZRN3-202ENST00000308537 CTXN1P60606 82 aa17.03■□□□□ 0.32
PDZRN3-202ENST00000308537 TAF11Q15544 211 aa17.03■□□□□ 0.32
PDZRN3-202ENST00000308537 GLYATQ6IB77 296 aa17.03■□□□□ 0.32
PDZRN3-202ENST00000308537 SLC16A14Q7RTX9 510 aa17.03■□□□□ 0.32
PDZRN3-202ENST00000308537 HDDC2Q7Z4H3 204 aa17.03■□□□□ 0.32
PDZRN3-202ENST00000308537 CPEB3Q8NE35 698 aaKnown RBP17.03■□□□□ 0.32
PDZRN3-202ENST00000308537 SLC30A7Q8NEW0 376 aa17.03■□□□□ 0.32
PDZRN3-202ENST00000308537 FAM162AQ96A26 154 aa17.03■□□□□ 0.32
PDZRN3-202ENST00000308537 ALG12Q9BV10 488 aa17.03■□□□□ 0.32
PDZRN3-202ENST00000308537 SIAEQ9HAT2 523 aa17.03■□□□□ 0.32
PDZRN3-202ENST00000308537 MYOZ1Q9NP98 299 aaPredicted RBP17.03■□□□□ 0.32
PDZRN3-202ENST00000308537 STX18Q9P2W9 335 aaKnown RBP17.03■□□□□ 0.32
PDZRN3-202ENST00000308537 CD300AQ9UGN4 299 aa17.03■□□□□ 0.32
PDZRN3-202ENST00000308537 FBXO9Q9UK97 447 aaPredicted RBP17.03■□□□□ 0.32
PDZRN3-202ENST00000308537 LOC390937A0A1W2PQ73 354 aa17.02■□□□□ 0.32
PDZRN3-202ENST00000308537 SH3PXD2BA1X283 911 aa17.02■□□□□ 0.32
PDZRN3-202ENST00000308537 EFCAB9A8MZ26 197 aa17.02■□□□□ 0.32
PDZRN3-202ENST00000308537 FARS2O95363 451 aaKnown RBP17.02■□□□□ 0.32
PDZRN3-202ENST00000308537 STAMBPO95630 424 aa17.02■□□□□ 0.32
PDZRN3-202ENST00000308537 USF1P22415 310 aaPredicted RBP17.02■□□□□ 0.32
PDZRN3-202ENST00000308537 GIFP27352 417 aa17.02■□□□□ 0.32
PDZRN3-202ENST00000308537 GPR4P46093 362 aa17.02■□□□□ 0.32
PDZRN3-202ENST00000308537 SLC9A3P48764 834 aa17.02■□□□□ 0.32
PDZRN3-202ENST00000308537 ZNF84P51523 738 aa17.02■□□□□ 0.32
PDZRN3-202ENST00000308537 FXYD6P3P58550 94 aa17.02■□□□□ 0.32
PDZRN3-202ENST00000308537 TOP3AQ13472 1001 aaPredicted RBP17.02■□□□□ 0.32
PDZRN3-202ENST00000308537 SEC23BQ15437 767 aa17.02■□□□□ 0.32
PDZRN3-202ENST00000308537 ANKDD1AQ495B1 522 aa17.02■□□□□ 0.32
PDZRN3-202ENST00000308537 FKBP9P1Q75LS8 142 aa17.02■□□□□ 0.32
PDZRN3-202ENST00000308537 FAM122BQ7Z309 247 aa17.02■□□□□ 0.32
PDZRN3-202ENST00000308537 DPPA2Q7Z7J5 298 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms