RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 FAM90A14PP0C7W9 464 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 FAM90A24PP0C7X0 464 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 LTBQ06643 244 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 PHF19Q5T6S3 580 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 MAML2Q8IZL2 1156 aaPredicted RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 LMX1AQ8TE12 382 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 ATP13A2Q9NQ11 1180 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 NME4O00746 187 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 ETV3P41162 512 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 FOLR3P41439 243 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 REEP5Q00765 189 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 ATPAF1Q5TC12 328 aaPredicted RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 NAGSQ8N159 534 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 SCAMP5Q8TAC9 235 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 GAL3ST4Q96RP7 486 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 TCRBV5S1A1TA0A578 114 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 AQP7P3A6NL99 342 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 SLC31A2O15432 143 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 UBE2G2P60604 165 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 HSD17B13Q7Z5P4 300 aaPredicted RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 SCD5Q86SK9 330 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 MFSD4AQ8N468 514 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 KCNA7Q96RP8 456 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 FAM96BQ9Y3D0 163 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 FRG2CA6NGY1 282 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 SIAH2O43255 324 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 PDE6DO43924 150 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 OR12D1P0DN82 309 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 ZNF239Q16600 458 aaKnown RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 NPSR1Q6W5P4 371 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 USP53Q70EK8 1073 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 MRGPREQ86SM8 312 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 NLGN4YQ8NFZ3 816 aaPredicted RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 SLC38A5Q8WUX1 472 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 TMPRSS13Q9BYE2 586 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 ADAM33Q9BZ11 813 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 CSNK1A1P48729 337 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 AGFG1P52594 562 aaKnown RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 ESX1Q8N693 406 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 NFAM1Q8NET5 270 aaPredicted RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 OR6N2Q8NGY6 317 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 LRRC15Q8TF66 581 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 TMEM18Q96B42 140 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 M0R3H8 397 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 AMY2AP04746 511 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 KCNJ10P78508 379 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 ALKBH1Q13686 389 aaKnown RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 DCST2Q5T1A1 773 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 KCTD9Q7L273 389 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 PGBD5Q8N414 524 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 IQCF1Q8N6M8 205 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 C19orf47Q8N9M1 422 aaKnown RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 OR4N2Q8NGD1 307 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 OR8D2Q9GZM6 311 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 B4GALT6Q9UBX8 382 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 ZNF443Q9Y2A4 671 aaPredicted RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 URB1O60287 2271 aaKnown RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 OPN1MWP04001 364 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 OPN1MW2P0DN77 364 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 OPN1MW3P0DN78 364 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 EPXP11678 715 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 ERVPABLB-1P60509 514 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 RAC1P63000 192 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 DCDP81605 110 aaKnown RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 SEMG2Q02383 582 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 DGKZQ13574 1117 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 LY6G5CQ5SRR4 150 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 CPNE8Q86YQ8 564 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 IGDCC3Q8IVU1 814 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 TMEM106AQ96A25 262 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 SLC2A6Q9UGQ3 507 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 GABRQQ9UN88 632 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 C19orf53Q9UNZ5 99 aaPredicted RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 OR2A25A4D2G3 310 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 IFITM5A6NNB3 132 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 HPNP05981 417 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 ADRB1P08588 477 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 ETV5P41161 510 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 PTH2RP49190 550 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 OR10A3P58181 314 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 ZNF616Q08AN1 781 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 PMPCAQ10713 525 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 NHLRC1Q6VVB1 395 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 TMPRSS11FQ6ZWK6 438 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 EIF4E3Q8N5X7 224 aaKnown RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 BPIFCQ8NFQ6 507 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 OR1S2Q8NGQ3 325 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 FBXL20Q96IG2 436 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 TRIB1Q96RU8 372 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 DPCDQ9BVM2 203 aaPredicted RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 RAB33BQ9H082 229 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 SIDT1Q9NXL6 827 aaKnown RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 TREM2Q9NZC2 230 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 WDR90Q96KV7 1748 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 CXorf49A8MYA2 514 aaPredicted RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 DEDDO75618 318 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 DCNP07585 359 aaKnown RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 TNK1Q13470 666 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 FZD2Q14332 565 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 TMEM52BQ4KMG9 183 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms