RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 MAPK11Q15759 364 aa9.9□□□□□ -0.82
SMIM4-201ENST00000307106 SMU1Q2TAY7 513 aa9.9□□□□□ -0.82
SMIM4-201ENST00000307106 SPATA46Q5T0L3 261 aa9.9□□□□□ -0.82
SMIM4-201ENST00000307106 THEM4Q5T1C6 240 aa9.9□□□□□ -0.82
SMIM4-201ENST00000307106 GPR157Q5UAW9 335 aa9.9□□□□□ -0.82
SMIM4-201ENST00000307106 RUSC1-AS1Q66K80 236 aa9.9□□□□□ -0.82
SMIM4-201ENST00000307106 NHLRC1Q6VVB1 395 aa9.9□□□□□ -0.82
SMIM4-201ENST00000307106 WDR88Q6ZMY6 472 aa9.9□□□□□ -0.82
SMIM4-201ENST00000307106 ZNF283Q8N7M2 679 aa9.9□□□□□ -0.82
SMIM4-201ENST00000307106 RAB40AQ8WXH6 277 aa9.9□□□□□ -0.82
SMIM4-201ENST00000307106 THOC1Q96FV9 657 aaKnown RBP9.9□□□□□ -0.82
SMIM4-201ENST00000307106 TMEM38BQ9NVV0 291 aa9.9□□□□□ -0.82
SMIM4-201ENST00000307106 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.9□□□□□ -0.82
SMIM4-201ENST00000307106 CGGBP1Q9UFW8 167 aaPredicted RBP9.9□□□□□ -0.82
SMIM4-201ENST00000307106 CHST2Q9Y4C5 530 aa9.9□□□□□ -0.82
SMIM4-201ENST00000307106 NOTCH3Q9UM47 2321 aa9.9□□□□□ -0.82
SMIM4-201ENST00000307106 CEACAM18A8MTB9 384 aa9.89□□□□□ -0.83
SMIM4-201ENST00000307106 SERPINI2O75830 405 aa9.89□□□□□ -0.83
SMIM4-201ENST00000307106 WNT2P09544 360 aa9.89□□□□□ -0.83
SMIM4-201ENST00000307106 APLNRP35414 380 aa9.89□□□□□ -0.83
SMIM4-201ENST00000307106 BPIFB3P59826 476 aa9.89□□□□□ -0.83
SMIM4-201ENST00000307106 GNB2P62879 340 aa9.89□□□□□ -0.83
SMIM4-201ENST00000307106 HOXC5Q00444 222 aa9.89□□□□□ -0.83
SMIM4-201ENST00000307106 PLP2Q04941 152 aa9.89□□□□□ -0.83
SMIM4-201ENST00000307106 PUDPQ08623 228 aa9.89□□□□□ -0.83
SMIM4-201ENST00000307106 LARS2Q15031 903 aaKnown RBP9.89□□□□□ -0.83
SMIM4-201ENST00000307106 SLC36A2Q495M3 483 aa9.89□□□□□ -0.83
SMIM4-201ENST00000307106 COX20Q5RI15 118 aa9.89□□□□□ -0.83
SMIM4-201ENST00000307106 SLC16A14Q7RTX9 510 aa9.89□□□□□ -0.83
SMIM4-201ENST00000307106 DPPA2Q7Z7J5 298 aa9.89□□□□□ -0.83
SMIM4-201ENST00000307106 C1orf174Q8IYL3 243 aa9.89□□□□□ -0.83
SMIM4-201ENST00000307106 ZNF101Q8IZC7 436 aa9.89□□□□□ -0.83
SMIM4-201ENST00000307106 RBM15BQ8NDT2 890 aaKnown RBP9.89□□□□□ -0.83
SMIM4-201ENST00000307106 SLC25A40Q8TBP6 338 aa9.89□□□□□ -0.83
SMIM4-201ENST00000307106 TBC1D15Q8TC07 691 aa9.89□□□□□ -0.83
SMIM4-201ENST00000307106 SSMEM1Q8WWF3 244 aa9.89□□□□□ -0.83
SMIM4-201ENST00000307106 PPP1R14AQ96A00 147 aa9.89□□□□□ -0.83
SMIM4-201ENST00000307106 DACT3Q96B18 629 aaPredicted RBP9.89□□□□□ -0.83
SMIM4-201ENST00000307106 MARS2Q96GW9 593 aaKnown RBP9.89□□□□□ -0.83
SMIM4-201ENST00000307106 SLC41A3Q96GZ6 507 aa9.89□□□□□ -0.83
SMIM4-201ENST00000307106 SIGLEC11Q96RL6 698 aa9.89□□□□□ -0.83
SMIM4-201ENST00000307106 ARHGDIGQ99819 225 aa9.89□□□□□ -0.83
SMIM4-201ENST00000307106 SLC19A3Q9BZV2 496 aa9.89□□□□□ -0.83
SMIM4-201ENST00000307106 C12orf10Q9HB07 376 aa9.89□□□□□ -0.83
SMIM4-201ENST00000307106 MSL2Q9HCI7 577 aa9.89□□□□□ -0.83
SMIM4-201ENST00000307106 ASIC5Q9NY37 505 aa9.89□□□□□ -0.83
SMIM4-201ENST00000307106 GLTPQ9NZD2 209 aa9.89□□□□□ -0.83
SMIM4-201ENST00000307106 KLHL14Q9P2G3 628 aa9.89□□□□□ -0.83
SMIM4-201ENST00000307106 RPS6KB2Q9UBS0 482 aa9.89□□□□□ -0.83
SMIM4-201ENST00000307106 IGKV1D-42A0A075B6H8 117 aa9.88□□□□□ -0.83
SMIM4-201ENST00000307106 CCDC154A6NI56 674 aa9.88□□□□□ -0.83
SMIM4-201ENST00000307106 COPEO14579 308 aa9.88□□□□□ -0.83
SMIM4-201ENST00000307106 RIPK2O43353 540 aa9.88□□□□□ -0.83
SMIM4-201ENST00000307106 THRBP10828 461 aa9.88□□□□□ -0.83
SMIM4-201ENST00000307106 RPS2P15880 293 aaKnown RBP9.88□□□□□ -0.83
SMIM4-201ENST00000307106 AHCYP23526 432 aa9.88□□□□□ -0.83
SMIM4-201ENST00000307106 MDH2P40926 338 aaKnown RBP9.88□□□□□ -0.83
SMIM4-201ENST00000307106 BIDP55957 195 aa9.88□□□□□ -0.83
SMIM4-201ENST00000307106 TTMPQ5BVD1 217 aa9.88□□□□□ -0.83
SMIM4-201ENST00000307106 ZMAT1Q5H9K5 638 aa9.88□□□□□ -0.83
SMIM4-201ENST00000307106 SPANXN4Q5MJ08 99 aa9.88□□□□□ -0.83
SMIM4-201ENST00000307106 MBNL2Q5VZF2 373 aaKnown RBP9.88□□□□□ -0.83
SMIM4-201ENST00000307106 C11orf87Q6NUJ2 197 aa9.88□□□□□ -0.83
SMIM4-201ENST00000307106 ZNF774Q6NX45 483 aa9.88□□□□□ -0.83
SMIM4-201ENST00000307106 Q6ZSV7 163 aa9.88□□□□□ -0.83
SMIM4-201ENST00000307106 PXKQ7Z7A4 578 aa9.88□□□□□ -0.83
SMIM4-201ENST00000307106 MUC20Q8N307 709 aaPredicted RBP9.88□□□□□ -0.83
SMIM4-201ENST00000307106 TRIML2Q8N7C3 387 aa9.88□□□□□ -0.83
SMIM4-201ENST00000307106 SCAIQ8N9R8 606 aa9.88□□□□□ -0.83
SMIM4-201ENST00000307106 OR4K5Q8NGD3 323 aa9.88□□□□□ -0.83
SMIM4-201ENST00000307106 KLF14Q8TD94 323 aaPredicted RBP9.88□□□□□ -0.83
SMIM4-201ENST00000307106 TMEM54Q969K7 222 aa9.88□□□□□ -0.83
SMIM4-201ENST00000307106 TESCQ96BS2 214 aa9.88□□□□□ -0.83
SMIM4-201ENST00000307106 SPATA9Q9BWV2 254 aa9.88□□□□□ -0.83
SMIM4-201ENST00000307106 ASPNQ9BXN1 380 aa9.88□□□□□ -0.83
SMIM4-201ENST00000307106 OR2J1Q9GZK6 312 aa9.88□□□□□ -0.83
SMIM4-201ENST00000307106 ARMC7Q9H6L4 198 aa9.88□□□□□ -0.83
SMIM4-201ENST00000307106 NECAP2Q9NVZ3 263 aa9.88□□□□□ -0.83
SMIM4-201ENST00000307106 AURKAIP1Q9NWT8 199 aaPredicted RBP9.88□□□□□ -0.83
SMIM4-201ENST00000307106 CALML5Q9NZT1 146 aa9.88□□□□□ -0.83
SMIM4-201ENST00000307106 P2RX2Q9UBL9 471 aa9.88□□□□□ -0.83
SMIM4-201ENST00000307106 ZNF232Q9UNY5 417 aa9.88□□□□□ -0.83
SMIM4-201ENST00000307106 DNAH3Q8TD57 4116 aa9.88□□□□□ -0.83
SMIM4-201ENST00000307106 KIR2DS1A0A191URI9 304 aa9.87□□□□□ -0.83
SMIM4-201ENST00000307106 TNFRSF13BO14836 293 aaPredicted RBP9.87□□□□□ -0.83
SMIM4-201ENST00000307106 BCHEP06276 602 aa9.87□□□□□ -0.83
SMIM4-201ENST00000307106 TNFRSF1AP19438 455 aa9.87□□□□□ -0.83
SMIM4-201ENST00000307106 ALDH3A1P30838 453 aa9.87□□□□□ -0.83
SMIM4-201ENST00000307106 CASQ1P31415 396 aa9.87□□□□□ -0.83
SMIM4-201ENST00000307106 WNT5AP41221 380 aa9.87□□□□□ -0.83
SMIM4-201ENST00000307106 CRISP3P54108 245 aa9.87□□□□□ -0.83
SMIM4-201ENST00000307106 FGF12P61328 243 aa9.87□□□□□ -0.83
SMIM4-201ENST00000307106 HSF2Q03933 536 aa9.87□□□□□ -0.83
SMIM4-201ENST00000307106 RPS26P11Q5JNZ5 115 aaPredicted RBP9.87□□□□□ -0.83
SMIM4-201ENST00000307106 UNQ6126/PRO20091Q6UXV3 157 aa9.87□□□□□ -0.83
SMIM4-201ENST00000307106 TRMT10CQ7L0Y3 403 aaKnown RBP9.87□□□□□ -0.83
SMIM4-201ENST00000307106 ZSCAN4Q8NAM6 433 aaPredicted RBP9.87□□□□□ -0.83
SMIM4-201ENST00000307106 SAMD8Q96LT4 415 aa9.87□□□□□ -0.83
SMIM4-201ENST00000307106 CCDC115Q96NT0 180 aa9.87□□□□□ -0.83
SMIM4-201ENST00000307106 PANX1Q96RD7 426 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms