RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 GREM1O60565 184 aa11.9□□□□□ -0.5
TRIM35-201ENST00000305364 THY1P04216 161 aa11.9□□□□□ -0.5
TRIM35-201ENST00000305364 ADH6P28332 368 aa11.9□□□□□ -0.5
TRIM35-201ENST00000305364 PPIAP62937 165 aaKnown RBP11.9□□□□□ -0.5
TRIM35-201ENST00000305364 CYCSP99999 105 aaKnown RBP11.9□□□□□ -0.5
TRIM35-201ENST00000305364 DHRS2Q13268 280 aa11.9□□□□□ -0.5
TRIM35-201ENST00000305364 EIF2S3LQ2VIR3 472 aaKnown RBP11.9□□□□□ -0.5
TRIM35-201ENST00000305364 ADAM5Q6NVV9 412 aa11.9□□□□□ -0.5
TRIM35-201ENST00000305364 FAM180AQ6UWF9 173 aa11.9□□□□□ -0.5
TRIM35-201ENST00000305364 ZNF765Q7L2R6 523 aa11.9□□□□□ -0.5
TRIM35-201ENST00000305364 BAP18Q8IXM2 172 aa11.9□□□□□ -0.5
TRIM35-201ENST00000305364 WDSUB1Q8N9V3 476 aa11.9□□□□□ -0.5
TRIM35-201ENST00000305364 OR2L8Q8NGY9 312 aa11.9□□□□□ -0.5
TRIM35-201ENST00000305364 KISS1RQ969F8 398 aaPredicted RBP11.9□□□□□ -0.5
TRIM35-201ENST00000305364 SERINC2Q96SA4 455 aa11.9□□□□□ -0.5
TRIM35-201ENST00000305364 ZNF587Q96SQ5 575 aaPredicted RBP11.9□□□□□ -0.5
TRIM35-201ENST00000305364 ZNF649Q9BS31 505 aa11.9□□□□□ -0.5
TRIM35-201ENST00000305364 VN1R3Q9BXE9 311 aa11.9□□□□□ -0.5
TRIM35-201ENST00000305364 ZNF346Q9UL40 294 aaKnown RBP11.9□□□□□ -0.5
TRIM35-201ENST00000305364 MEMO1Q9Y316 297 aa11.9□□□□□ -0.5
TRIM35-201ENST00000305364 OLFM2O95897 454 aa11.9□□□□□ -0.51
TRIM35-201ENST00000305364 SERPINA5P05154 406 aa11.9□□□□□ -0.51
TRIM35-201ENST00000305364 CD80P33681 288 aa11.9□□□□□ -0.51
TRIM35-201ENST00000305364 SLC9A3R2Q15599 337 aa11.9□□□□□ -0.51
TRIM35-201ENST00000305364 PABPC1L2AQ5JQF8 200 aa11.9□□□□□ -0.51
TRIM35-201ENST00000305364 LPCAT3Q6P1A2 487 aa11.9□□□□□ -0.51
TRIM35-201ENST00000305364 KCTD18Q6PI47 426 aaPredicted RBP11.9□□□□□ -0.51
TRIM35-201ENST00000305364 ZNF248Q8NDW4 579 aa11.9□□□□□ -0.51
TRIM35-201ENST00000305364 OR13C3Q8NGS6 347 aa11.9□□□□□ -0.51
TRIM35-201ENST00000305364 LINC00615Q96LM1 132 aaPredicted RBP11.9□□□□□ -0.51
TRIM35-201ENST00000305364 PRSS27Q9BQR3 290 aa11.9□□□□□ -0.51
TRIM35-201ENST00000305364 SCN2AQ99250 2005 aa11.89□□□□□ -0.51
TRIM35-201ENST00000305364 CACNA1IQ9P0X4 2223 aa11.89□□□□□ -0.51
TRIM35-201ENST00000305364 RAB6AP20340 208 aa11.89□□□□□ -0.51
TRIM35-201ENST00000305364 HTR2CP28335 458 aa11.89□□□□□ -0.51
TRIM35-201ENST00000305364 ZNF136P52737 540 aa11.89□□□□□ -0.51
TRIM35-201ENST00000305364 HNRNPA1L2Q32P51 320 aaKnown RBP11.89□□□□□ -0.51
TRIM35-201ENST00000305364 HLA-DQA1Q5Y7H0 255 aa11.89□□□□□ -0.51
TRIM35-201ENST00000305364 LDLRAD3Q86YD5 345 aa11.89□□□□□ -0.51
TRIM35-201ENST00000305364 HAO2Q9NYQ3 351 aa11.89□□□□□ -0.51
TRIM35-201ENST00000305364 HEBP2Q9Y5Z4 205 aa11.89□□□□□ -0.51
TRIM35-201ENST00000305364 ABCD4O14678 606 aa11.89□□□□□ -0.51
TRIM35-201ENST00000305364 PIN1P1O15428 100 aa11.89□□□□□ -0.51
TRIM35-201ENST00000305364 HTRA4P83105 476 aaPredicted RBP11.89□□□□□ -0.51
TRIM35-201ENST00000305364 MEF2DQ14814 521 aa11.89□□□□□ -0.51
TRIM35-201ENST00000305364 C2orf27AQ580R0 203 aa11.89□□□□□ -0.51
TRIM35-201ENST00000305364 ZNF761Q86XN6 746 aaPredicted RBP11.89□□□□□ -0.51
TRIM35-201ENST00000305364 MFSD9Q8NBP5 474 aa11.89□□□□□ -0.51
TRIM35-201ENST00000305364 PBX4Q9BYU1 374 aa11.89□□□□□ -0.51
TRIM35-201ENST00000305364 SOHLH2Q9NX45 425 aa11.89□□□□□ -0.51
TRIM35-201ENST00000305364 ZNF749O43361 778 aa11.89□□□□□ -0.51
TRIM35-201ENST00000305364 TSPAN15O95858 294 aa11.89□□□□□ -0.51
TRIM35-201ENST00000305364 S100A8P05109 93 aa11.89□□□□□ -0.51
TRIM35-201ENST00000305364 CXCR1P25024 350 aa11.89□□□□□ -0.51
TRIM35-201ENST00000305364 CST5P28325 142 aaPredicted RBP11.89□□□□□ -0.51
TRIM35-201ENST00000305364 PPP2CBP62714 309 aa11.89□□□□□ -0.51
TRIM35-201ENST00000305364 RPS15P62841 145 aaKnown RBP11.89□□□□□ -0.51
TRIM35-201ENST00000305364 PPP2CAP67775 309 aa11.89□□□□□ -0.51
TRIM35-201ENST00000305364 GPR18Q14330 331 aa11.89□□□□□ -0.51
TRIM35-201ENST00000305364 SLC39A5Q6ZMH5 540 aa11.89□□□□□ -0.51
TRIM35-201ENST00000305364 KCNRGQ8N5I3 272 aa11.89□□□□□ -0.51
TRIM35-201ENST00000305364 OR4S1Q8NGB4 309 aa11.89□□□□□ -0.51
TRIM35-201ENST00000305364 C20orf24Q9BUV8 137 aa11.89□□□□□ -0.51
TRIM35-201ENST00000305364 SMIM3Q9BZL3 60 aa11.89□□□□□ -0.51
TRIM35-201ENST00000305364 TPRP12270 2363 aaKnown RBP11.88□□□□□ -0.51
TRIM35-201ENST00000305364 RIDAP52758 137 aaKnown RBP11.88□□□□□ -0.51
TRIM35-201ENST00000305364 TCEAL5Q5H9L2 206 aa11.88□□□□□ -0.51
TRIM35-201ENST00000305364 SLC35D3Q5M8T2 416 aa11.88□□□□□ -0.51
TRIM35-201ENST00000305364 PAPD4Q6PIY7 484 aaKnown RBP11.88□□□□□ -0.51
TRIM35-201ENST00000305364 ELP5Q8TE02 316 aa11.88□□□□□ -0.51
TRIM35-201ENST00000305364 GAS2L1Q99501 681 aaPredicted RBP11.88□□□□□ -0.51
TRIM35-201ENST00000305364 MPTX1A8MV57 137 aa11.88□□□□□ -0.51
TRIM35-201ENST00000305364 KCNAB3O43448 404 aa11.88□□□□□ -0.51
TRIM35-201ENST00000305364 CTAG2O75638 210 aa11.88□□□□□ -0.51
TRIM35-201ENST00000305364 STK17BO94768 372 aa11.88□□□□□ -0.51
TRIM35-201ENST00000305364 TBX6O95947 436 aaPredicted RBP11.88□□□□□ -0.51
TRIM35-201ENST00000305364 CASRP41180 1078 aa11.88□□□□□ -0.51
TRIM35-201ENST00000305364 EBPQ15125 230 aaKnown RBP11.88□□□□□ -0.51
TRIM35-201ENST00000305364 GFOD2Q3B7J2 385 aa11.88□□□□□ -0.51
TRIM35-201ENST00000305364 SLC16A9Q7RTY1 509 aa11.88□□□□□ -0.51
TRIM35-201ENST00000305364 TRAPPC6BQ86SZ2 158 aa11.88□□□□□ -0.51
TRIM35-201ENST00000305364 FGF11Q92914 225 aa11.88□□□□□ -0.51
TRIM35-201ENST00000305364 LCORQ96JN0 433 aaPredicted RBP11.88□□□□□ -0.51
TRIM35-201ENST00000305364 GAL3ST4Q96RP7 486 aa11.88□□□□□ -0.51
TRIM35-201ENST00000305364 PARP12Q9H0J9 701 aaKnown RBP11.88□□□□□ -0.51
TRIM35-201ENST00000305364 EPHA6Q9UF33 1036 aa11.88□□□□□ -0.51
TRIM35-201ENST00000305364 A0A1W2PP55 124 aa11.88□□□□□ -0.51
TRIM35-201ENST00000305364 OIP5O43482 229 aa11.88□□□□□ -0.51
TRIM35-201ENST00000305364 NANOS3P60323 173 aaKnown RBP11.88□□□□□ -0.51
TRIM35-201ENST00000305364 KLHL24Q6TFL4 600 aa11.88□□□□□ -0.51
TRIM35-201ENST00000305364 HAVCR2Q8TDQ0 301 aa11.88□□□□□ -0.51
TRIM35-201ENST00000305364 SMARCD2Q92925 531 aa11.88□□□□□ -0.51
TRIM35-201ENST00000305364 S100A13Q99584 98 aa11.88□□□□□ -0.51
TRIM35-201ENST00000305364 C19orf53Q9UNZ5 99 aaPredicted RBP11.88□□□□□ -0.51
TRIM35-201ENST00000305364 MOKQ9UQ07 419 aa11.88□□□□□ -0.51
TRIM35-201ENST00000305364 PET100P0DJ07 73 aa11.87□□□□□ -0.51
TRIM35-201ENST00000305364 NFYBP25208 207 aa11.87□□□□□ -0.51
TRIM35-201ENST00000305364 PSMB6P28072 239 aa11.87□□□□□ -0.51
TRIM35-201ENST00000305364 SDHAP31040 664 aa11.87□□□□□ -0.51
TRIM35-201ENST00000305364 GDI1P31150 447 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms